RNA–Protein interactions for RNA: ENST00000392869.6

GTDC1-204, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 10,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-204ENST00000392869 GOLGA6L9A6NEM1 432 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 GCOM1H8Y6P7 765 aaPredicted RBP7.3□□□□□ -1.24
GTDC1-204ENST00000392869 MYZAPP0CAP1 466 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 CETN2P41208 172 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 ZNF396Q96N95 335 aaPredicted RBP7.3□□□□□ -1.24
GTDC1-204ENST00000392869 MAGEC2Q9UBF1 373 aaPredicted RBP7.3□□□□□ -1.24
GTDC1-204ENST00000392869 FAM114A1Q8IWE2 563 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 LMOD2Q6P5Q4 547 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 BICD2Q8TD16 824 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 CAVIN2O95810 425 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 SART3Q15020 963 aaKnown RBP7.3□□□□□ -1.24
GTDC1-204ENST00000392869 LRRCC1Q9C099 1032 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 VPS8Q8N3P4 1428 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 TRIM34Q9BYJ4 488 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 A6NNZ2 444 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 KINO60870 393 aaKnown RBP7.3□□□□□ -1.24
GTDC1-204ENST00000392869 TUBB8Q3ZCM7 444 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 TTLL5Q6EMB2 1281 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 KIAA1328Q86T90 577 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 ZKSCAN2Q63HK3 967 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 CREBRFQ8IUR6 639 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 AXDND1Q5T1B0 1012 aaPredicted RBP7.29□□□□□ -1.24
GTDC1-204ENST00000392869 DDX58O95786 925 aaKnown RBP7.29□□□□□ -1.24
GTDC1-204ENST00000392869 MCM5P33992 734 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 SRPK2P78362 688 aaKnown RBP7.29□□□□□ -1.24
GTDC1-204ENST00000392869 CC2D1BQ5T0F9 858 aaKnown RBP7.29□□□□□ -1.24
GTDC1-204ENST00000392869 JAKMIP3Q5VZ66 844 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 CCDC83Q8IWF9 413 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 CCDC192P0DO97 292 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 NAP1L1P55209 391 aaKnown RBP7.29□□□□□ -1.24
GTDC1-204ENST00000392869 SMC3Q9UQE7 1217 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 NEMFO60524 1076 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 IMMTQ16891 758 aaKnown RBP7.29□□□□□ -1.24
GTDC1-204ENST00000392869 CCDC144AA2RUR9 1427 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 DDX46Q7L014 1031 aaKnown RBP7.29□□□□□ -1.24
GTDC1-204ENST00000392869 HSP90AB3PQ58FF7 597 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 C6orf163Q5TEZ5 329 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 CCDC146Q8IYE0 955 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 FAM114A2Q9NRY5 505 aa7.29□□□□□ -1.24
GTDC1-204ENST00000392869 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.29□□□□□ -1.24
GTDC1-204ENST00000392869 CTDP1Q9Y5B0 961 aaPredicted RBP7.29□□□□□ -1.24
GTDC1-204ENST00000392869 PLEKHH1Q9ULM0 1364 aa7.28□□□□□ -1.24
GTDC1-204ENST00000392869 CCDC181Q5TID7 509 aa7.28□□□□□ -1.24
GTDC1-204ENST00000392869 API5Q9BZZ5 524 aaKnown RBP7.28□□□□□ -1.24
GTDC1-204ENST00000392869 PODXL2Q9NZ53 605 aa7.28□□□□□ -1.24
GTDC1-204ENST00000392869 IVLP07476 585 aa7.28□□□□□ -1.24
GTDC1-204ENST00000392869 ENOX2Q16206 610 aaKnown RBP7.28□□□□□ -1.24
GTDC1-204ENST00000392869 CCAR1Q8IX12 1150 aaKnown RBP7.28□□□□□ -1.24
GTDC1-204ENST00000392869 NCBP3Q53F19 620 aaKnown RBP7.28□□□□□ -1.24
GTDC1-204ENST00000392869 TAOK3Q9H2K8 898 aa7.28□□□□□ -1.24
GTDC1-204ENST00000392869 SWAP70Q9UH65 585 aa7.28□□□□□ -1.24
GTDC1-204ENST00000392869 EIF3DO15371 548 aaKnown RBP eCLIP7.28□□□□□ -1.24
GTDC1-204ENST00000392869 MYO15BQ96JP2 1530 aa7.28□□□□□ -1.24
GTDC1-204ENST00000392869 CIZ1Q9ULV3 898 aaPredicted RBP7.28□□□□□ -1.24
GTDC1-204ENST00000392869 ZSCAN12O43309 604 aa7.27□□□□□ -1.24
GTDC1-204ENST00000392869 SPECC1LQ69YQ0 1117 aa7.27□□□□□ -1.25
GTDC1-204ENST00000392869 RBM33Q96EV2 1170 aaKnown RBP7.27□□□□□ -1.25
GTDC1-204ENST00000392869 DNAJC2Q99543 621 aaKnown RBP7.27□□□□□ -1.25
GTDC1-204ENST00000392869 SMTNL1A8MU46 457 aa7.27□□□□□ -1.25
GTDC1-204ENST00000392869 SLC3A2P08195 630 aaKnown RBP7.27□□□□□ -1.25
GTDC1-204ENST00000392869 VPS53Q5VIR6 699 aa7.27□□□□□ -1.25
GTDC1-204ENST00000392869 PDE4AP27815 886 aa7.27□□□□□ -1.25
GTDC1-204ENST00000392869 TUBBP07437 444 aa7.27□□□□□ -1.25
GTDC1-204ENST00000392869 ZNF397Q8NF99 534 aaPredicted RBP7.27□□□□□ -1.25
GTDC1-204ENST00000392869 SMC1AQ14683 1233 aaKnown RBP7.27□□□□□ -1.25
GTDC1-204ENST00000392869 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.27□□□□□ -1.25
GTDC1-204ENST00000392869 CFAP45Q9UL16 551 aa7.27□□□□□ -1.25
GTDC1-204ENST00000392869 CCDC148Q8NFR7 591 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 TMCO5BA8MYB1 307 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 CGNQ9P2M7 1197 aaKnown RBP7.26□□□□□ -1.25
GTDC1-204ENST00000392869 SPRYD3Q8NCJ5 442 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 DCAF11Q8TEB1 546 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 TAOK2Q9UL54 1235 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 CNTLNQ9NXG0 1405 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 ERC1Q8IUD2 1116 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 POTEJP0CG39 1038 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 U2AF1L5P0DN76 240 aaPredicted RBP7.26□□□□□ -1.25
GTDC1-204ENST00000392869 U2AF1Q01081 240 aaKnown RBP eCLIP7.26□□□□□ -1.25
GTDC1-204ENST00000392869 SEPT6Q14141 434 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 PDCL3Q9H2J4 239 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 SREK1Q8WXA9 508 aaKnown RBP7.26□□□□□ -1.25
GTDC1-204ENST00000392869 RRBP1Q9P2E9 1410 aaKnown RBP7.26□□□□□ -1.25
GTDC1-204ENST00000392869 RALYLQ86SE5 291 aaKnown RBP7.26□□□□□ -1.25
GTDC1-204ENST00000392869 TSPY26PQ9H489 355 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 CUX1P39880 1505 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 CRACR2AQ9BSW2 395 aa7.26□□□□□ -1.25
GTDC1-204ENST00000392869 CDKL5O76039 1030 aa7.25□□□□□ -1.25
GTDC1-204ENST00000392869 NAA15Q9BXJ9 866 aaKnown RBP7.25□□□□□ -1.25
GTDC1-204ENST00000392869 FRAT2O75474 233 aaPredicted RBP7.25□□□□□ -1.25
GTDC1-204ENST00000392869 CCDC175P0C221 793 aa7.25□□□□□ -1.25
GTDC1-204ENST00000392869 MIA2Q96PC5 1412 aa7.25□□□□□ -1.25
GTDC1-204ENST00000392869 PYM1Q9BRP8 204 aaKnown RBP7.25□□□□□ -1.25
GTDC1-204ENST00000392869 WASHC2CQ9Y4E1 1318 aa7.25□□□□□ -1.25
GTDC1-204ENST00000392869 FILIP1Q7Z7B0 1213 aa7.25□□□□□ -1.25
GTDC1-204ENST00000392869 WDR66Q8TBY9 1149 aa7.25□□□□□ -1.25
GTDC1-204ENST00000392869 PPP1R12BO60237 982 aaPredicted RBP7.25□□□□□ -1.25
GTDC1-204ENST00000392869 MAP2K1Q02750 393 aaPredicted RBP7.24□□□□□ -1.25
GTDC1-204ENST00000392869 SMARCA2P51531 1590 aa7.24□□□□□ -1.25
GTDC1-204ENST00000392869 KIF20AO95235 890 aa7.24□□□□□ -1.25
GTDC1-204ENST00000392869 CNGA1P29973 690 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms