RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 EIF4G3O43432 1585 aaKnown RBP3.35□□□□□ -1.87
SNORA40.18-201ENST00000391200 ABCC8Q09428 1581 aa3.35□□□□□ -1.87
SNORA40.18-201ENST00000391200 TARBP1Q13395 1621 aaKnown RBP3.35□□□□□ -1.87
SNORA40.18-201ENST00000391200 BLOC1S3Q6QNY0 202 aa3.35□□□□□ -1.87
SNORA40.18-201ENST00000391200 TTC24A2A3L6 582 aaPredicted RBP3.34□□□□□ -1.87
SNORA40.18-201ENST00000391200 VGFO15240 615 aaPredicted RBP3.34□□□□□ -1.87
SNORA40.18-201ENST00000391200 RNF40O75150 1001 aa3.34□□□□□ -1.87
SNORA40.18-201ENST00000391200 VSIG8P0DPA2 414 aa3.34□□□□□ -1.87
SNORA40.18-201ENST00000391200 TRIM46Q7Z4K8 759 aa3.34□□□□□ -1.87
SNORA40.18-201ENST00000391200 FAM198AQ9UFP1 575 aa3.34□□□□□ -1.87
SNORA40.18-201ENST00000391200 SNAPC4Q5SXM2 1469 aa3.34□□□□□ -1.88
SNORA40.18-201ENST00000391200 BMP1P13497 986 aa3.33□□□□□ -1.88
SNORA40.18-201ENST00000391200 ITGB7P26010 798 aa3.33□□□□□ -1.88
SNORA40.18-201ENST00000391200 RANGAP1P46060 587 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.18-201ENST00000391200 WHAMMQ8TF30 809 aa3.33□□□□□ -1.88
SNORA40.18-201ENST00000391200 POLA1P09884 1462 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.18-201ENST00000391200 ERCC6L2Q5T890 1561 aa3.33□□□□□ -1.88
SNORA40.18-201ENST00000391200 DNMBPQ6XZF7 1577 aa3.33□□□□□ -1.88
SNORA40.18-201ENST00000391200 ARID3CA6NKF2 412 aa3.32□□□□□ -1.88
SNORA40.18-201ENST00000391200 FURINP09958 794 aa3.32□□□□□ -1.88
SNORA40.18-201ENST00000391200 VASPP50552 380 aaPredicted RBP3.32□□□□□ -1.88
SNORA40.18-201ENST00000391200 ZNF385CQ66K41 422 aaPredicted RBP3.32□□□□□ -1.88
SNORA40.18-201ENST00000391200 STK24Q9Y6E0 443 aa3.32□□□□□ -1.88
SNORA40.18-201ENST00000391200 GAPVD1Q14C86 1478 aa3.32□□□□□ -1.88
SNORA40.18-201ENST00000391200 FGD5Q6ZNL6 1462 aa3.32□□□□□ -1.88
SNORA40.18-201ENST00000391200 KIF13AQ9H1H9 1805 aa3.31□□□□□ -1.88
SNORA40.18-201ENST00000391200 CUX1P39880 1505 aa3.31□□□□□ -1.88
SNORA40.18-201ENST00000391200 SOBPA7XYQ1 873 aa3.31□□□□□ -1.88
SNORA40.18-201ENST00000391200 LAMC2Q13753 1193 aa3.31□□□□□ -1.88
SNORA40.18-201ENST00000391200 PBRM1Q86U86 1689 aa3.3□□□□□ -1.88
SNORA40.18-201ENST00000391200 SYNJ1O43426 1573 aa3.3□□□□□ -1.88
SNORA40.18-201ENST00000391200 GRIN2BQ13224 1484 aa3.3□□□□□ -1.88
SNORA40.18-201ENST00000391200 TYW1BQ6NUM6 668 aa3.3□□□□□ -1.88
SNORA40.18-201ENST00000391200 KANK3Q6NY19 840 aa3.3□□□□□ -1.88
SNORA40.18-201ENST00000391200 P3H3Q8IVL6 736 aa3.3□□□□□ -1.88
SNORA40.18-201ENST00000391200 GPR161Q8N6U8 529 aaKnown RBP3.3□□□□□ -1.88
SNORA40.18-201ENST00000391200 SPOCK2Q92563 424 aa3.3□□□□□ -1.88
SNORA40.18-201ENST00000391200 PRG4Q92954 1404 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.18-201ENST00000391200 ARHGEF15O94989 841 aa3.29□□□□□ -1.88
SNORA40.18-201ENST00000391200 IFNLR1Q8IU57 520 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.18-201ENST00000391200 CNTNAP3BQ96NU0 1288 aa3.29□□□□□ -1.88
SNORA40.18-201ENST00000391200 CNTNAP3Q9BZ76 1288 aa3.29□□□□□ -1.88
SNORA40.18-201ENST00000391200 SYNJ2O15056 1496 aa3.28□□□□□ -1.88
SNORA40.18-201ENST00000391200 COBLO75128 1261 aa3.28□□□□□ -1.88
SNORA40.18-201ENST00000391200 BAG6P46379 1132 aa3.28□□□□□ -1.88
SNORA40.18-201ENST00000391200 PACS2Q86VP3 889 aa3.28□□□□□ -1.88
SNORA40.18-201ENST00000391200 DCAF5Q96JK2 942 aa3.28□□□□□ -1.88
SNORA40.18-201ENST00000391200 PCDHB3Q9Y5E6 796 aa3.28□□□□□ -1.88
SNORA40.18-201ENST00000391200 FBXW7Q969H0 707 aa3.27□□□□□ -1.89
SNORA40.18-201ENST00000391200 CLASP1Q7Z460 1538 aa3.27□□□□□ -1.89
SNORA40.18-201ENST00000391200 MAGI1Q96QZ7 1491 aaPredicted RBP3.27□□□□□ -1.89
SNORA40.18-201ENST00000391200 CEP170Q5SW79 1584 aa3.26□□□□□ -1.89
SNORA40.18-201ENST00000391200 PHF14O94880 888 aa3.26□□□□□ -1.89
SNORA40.18-201ENST00000391200 GALNT6Q8NCL4 622 aa3.26□□□□□ -1.89
SNORA40.18-201ENST00000391200 SNIP1Q8TAD8 396 aaKnown RBP3.26□□□□□ -1.89
SNORA40.18-201ENST00000391200 RBM33Q96EV2 1170 aaKnown RBP3.26□□□□□ -1.89
SNORA40.18-201ENST00000391200 ATP1B4Q9UN42 357 aaPredicted RBP3.26□□□□□ -1.89
SNORA40.18-201ENST00000391200 WRNQ14191 1432 aaPredicted RBP eCLIP3.26□□□□□ -1.89
SNORA40.18-201ENST00000391200 ARID4BQ4LE39 1312 aaPredicted RBP3.25□□□□□ -1.89
SNORA40.18-201ENST00000391200 GRIN2AQ12879 1464 aa3.25□□□□□ -1.89
SNORA40.18-201ENST00000391200 RPIAP49247 311 aa3.25□□□□□ -1.89
SNORA40.18-201ENST00000391200 FAM9AQ8IZU1 332 aaPredicted RBP3.25□□□□□ -1.89
SNORA40.18-201ENST00000391200 SVOPQ8N4V2 548 aa3.25□□□□□ -1.89
SNORA40.18-201ENST00000391200 TATDN2Q93075 761 aa3.25□□□□□ -1.89
SNORA40.18-201ENST00000391200 SLC6A16Q9GZN6 736 aa3.25□□□□□ -1.89
SNORA40.18-201ENST00000391200 PTPRGP23470 1445 aa3.25□□□□□ -1.89
SNORA40.18-201ENST00000391200 MLECQ14165 292 aa3.24□□□□□ -1.89
SNORA40.18-201ENST00000391200 SWT1Q5T5J6 900 aaKnown RBP3.24□□□□□ -1.89
SNORA40.18-201ENST00000391200 MRGPRX2Q96LB1 330 aa3.24□□□□□ -1.89
SNORA40.18-201ENST00000391200 ZFP42Q96MM3 310 aa3.24□□□□□ -1.89
SNORA40.18-201ENST00000391200 PNMA3Q9UL41 463 aa3.24□□□□□ -1.89
SNORA40.18-201ENST00000391200 FHAD1B1AJZ9 1412 aa3.24□□□□□ -1.89
SNORA40.18-201ENST00000391200 IGF1RP08069 1367 aa3.24□□□□□ -1.89
SNORA40.18-201ENST00000391200 RAPGEF3O95398 923 aa3.23□□□□□ -1.89
SNORA40.18-201ENST00000391200 CD2BP2O95400 341 aaKnown RBP3.23□□□□□ -1.89
SNORA40.18-201ENST00000391200 ADH1BP00325 375 aa3.23□□□□□ -1.89
SNORA40.18-201ENST00000391200 MARSP56192 900 aaKnown RBP3.23□□□□□ -1.89
SNORA40.18-201ENST00000391200 TSR1Q2NL82 804 aaKnown RBP3.23□□□□□ -1.89
SNORA40.18-201ENST00000391200 PPP1R15BQ5SWA1 713 aa3.23□□□□□ -1.89
SNORA40.18-201ENST00000391200 ABCA10Q8WWZ4 1543 aa3.23□□□□□ -1.89
SNORA40.18-201ENST00000391200 WDR97A6NE52 1622 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 KDM6BO15054 1643 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 SLURP2P0DP57 97 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 HSPA2P54652 639 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 MAP3K9P80192 1104 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 FOXD4L6Q3SYB3 417 aaPredicted RBP3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 RNFT1Q5M7Z0 435 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 FOXD4L3Q6VB84 417 aaPredicted RBP3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 CUL7Q14999 1698 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 CARMIL1Q5VZK9 1371 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 ABCA5Q8WWZ7 1642 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 ADCY10Q96PN6 1610 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 ABCC10Q5T3U5 1492 aa3.22□□□□□ -1.89
SNORA40.18-201ENST00000391200 CNTNAP5Q8WYK1 1306 aa3.21□□□□□ -1.89
SNORA40.18-201ENST00000391200 WNT7AO00755 349 aa3.21□□□□□ -1.9
SNORA40.18-201ENST00000391200 PPFIA3O75145 1194 aa3.21□□□□□ -1.9
SNORA40.18-201ENST00000391200 CDCA7LQ96GN5 454 aa3.21□□□□□ -1.9
SNORA40.18-201ENST00000391200 SCARF2Q96GP6 870 aaPredicted RBP3.21□□□□□ -1.9
SNORA40.18-201ENST00000391200 EMILIN3Q9NT22 766 aa3.21□□□□□ -1.9
SNORA40.18-201ENST00000391200 COL17A1Q9UMD9 1497 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms