RNA–Protein interactions for RNA: ENST00000390367.3

TRBV11-1-201, Transcript of T cell receptor beta variable 11-1, humanhuman

APPRIS P1 BASIC

Gene TRBV11-1, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1-201ENST00000390367 MED14O60244 1454 aa13.43□□□□□ -0.26
TRBV11-1-201ENST00000390367 NRXN3Q9Y4C0 1643 aa13.43□□□□□ -0.26
TRBV11-1-201ENST00000390367 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
TRBV11-1-201ENST00000390367 WAPLQ7Z5K2 1190 aa13.41□□□□□ -0.26
TRBV11-1-201ENST00000390367 CDK19Q9BWU1 502 aa13.41□□□□□ -0.26
TRBV11-1-201ENST00000390367 TERF2IPQ9NYB0 399 aa13.41□□□□□ -0.26
TRBV11-1-201ENST00000390367 SETD1AO15047 1707 aaKnown RBP13.41□□□□□ -0.26
TRBV11-1-201ENST00000390367 KNDC1Q76NI1 1749 aa13.41□□□□□ -0.26
TRBV11-1-201ENST00000390367 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
TRBV11-1-201ENST00000390367 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
TRBV11-1-201ENST00000390367 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
TRBV11-1-201ENST00000390367 CABP2Q9NPB3 220 aa13.4□□□□□ -0.26
TRBV11-1-201ENST00000390367 CPS1P31327 1500 aa13.39□□□□□ -0.27
TRBV11-1-201ENST00000390367 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
TRBV11-1-201ENST00000390367 CENPBP07199 599 aaPredicted RBP13.39□□□□□ -0.27
TRBV11-1-201ENST00000390367 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
TRBV11-1-201ENST00000390367 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
TRBV11-1-201ENST00000390367 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
TRBV11-1-201ENST00000390367 ROBO2Q9HCK4 1378 aa13.36□□□□□ -0.27
TRBV11-1-201ENST00000390367 NPC1L1Q9UHC9 1359 aa13.36□□□□□ -0.27
TRBV11-1-201ENST00000390367 KCNA6P17658 529 aa13.36□□□□□ -0.27
TRBV11-1-201ENST00000390367 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
TRBV11-1-201ENST00000390367 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
TRBV11-1-201ENST00000390367 MRS2Q9HD23 443 aa13.36□□□□□ -0.27
TRBV11-1-201ENST00000390367 ANKRD36BQ8N2N9 1353 aa13.35□□□□□ -0.27
TRBV11-1-201ENST00000390367 PLEKHH1Q9ULM0 1364 aa13.35□□□□□ -0.27
TRBV11-1-201ENST00000390367 TULP4Q9NRJ4 1543 aa13.35□□□□□ -0.27
TRBV11-1-201ENST00000390367 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
TRBV11-1-201ENST00000390367 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
TRBV11-1-201ENST00000390367 CGNL1Q0VF96 1302 aa13.35□□□□□ -0.27
TRBV11-1-201ENST00000390367 PTPRUQ92729 1446 aa13.34□□□□□ -0.27
TRBV11-1-201ENST00000390367 NLRP13Q86W25 1043 aa13.33□□□□□ -0.28
TRBV11-1-201ENST00000390367 NUDT16Q96DE0 195 aaKnown RBP13.33□□□□□ -0.28
TRBV11-1-201ENST00000390367 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
TRBV11-1-201ENST00000390367 NSD2O96028 1365 aa13.32□□□□□ -0.28
TRBV11-1-201ENST00000390367 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
TRBV11-1-201ENST00000390367 YTHDC1Q96MU7 727 aaKnown RBP13.32□□□□□ -0.28
TRBV11-1-201ENST00000390367 CABP1Q9NZU7 370 aa13.32□□□□□ -0.28
TRBV11-1-201ENST00000390367 DMRT2Q9Y5R5 561 aa13.32□□□□□ -0.28
TRBV11-1-201ENST00000390367 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
TRBV11-1-201ENST00000390367 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
TRBV11-1-201ENST00000390367 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
TRBV11-1-201ENST00000390367 NSD3Q9BZ95 1437 aa13.3□□□□□ -0.28
TRBV11-1-201ENST00000390367 ADGRB2O60241 1585 aa13.29□□□□□ -0.28
TRBV11-1-201ENST00000390367 HSPA2P54652 639 aa13.29□□□□□ -0.28
TRBV11-1-201ENST00000390367 MORC1Q86VD1 984 aa13.29□□□□□ -0.28
TRBV11-1-201ENST00000390367 PROSER2Q86WR7 435 aaPredicted RBP13.29□□□□□ -0.28
TRBV11-1-201ENST00000390367 XRN1Q8IZH2 1706 aaKnown RBP13.29□□□□□ -0.28
TRBV11-1-201ENST00000390367 ATP7BP35670 1465 aa13.29□□□□□ -0.28
TRBV11-1-201ENST00000390367 MYOM1P52179 1685 aa13.28□□□□□ -0.28
TRBV11-1-201ENST00000390367 CARD14Q9BXL6 1004 aa13.28□□□□□ -0.28
TRBV11-1-201ENST00000390367 PPIP5K1Q6PFW1 1433 aa13.28□□□□□ -0.28
TRBV11-1-201ENST00000390367 CHD2O14647 1828 aaKnown RBP13.27□□□□□ -0.28
TRBV11-1-201ENST00000390367 A0A1W2PP64 1363 aa13.27□□□□□ -0.29
TRBV11-1-201ENST00000390367 PLEKHG3A1L390 1219 aa13.26□□□□□ -0.29
TRBV11-1-201ENST00000390367 ANKARQ7Z5J8 1434 aa13.26□□□□□ -0.29
TRBV11-1-201ENST00000390367 NKTRP30414 1462 aaKnown RBP13.25□□□□□ -0.29
TRBV11-1-201ENST00000390367 LMTK3Q96Q04 1460 aa13.25□□□□□ -0.29
TRBV11-1-201ENST00000390367 NCOA3Q9Y6Q9 1424 aa13.25□□□□□ -0.29
TRBV11-1-201ENST00000390367 FAM9BQ8IZU0 186 aa13.25□□□□□ -0.29
TRBV11-1-201ENST00000390367 NGDNQ8NEJ9 315 aaKnown RBP13.25□□□□□ -0.29
TRBV11-1-201ENST00000390367 PPP2R1AP30153 589 aa13.24□□□□□ -0.29
TRBV11-1-201ENST00000390367 CFAP53Q96M91 514 aa13.24□□□□□ -0.29
TRBV11-1-201ENST00000390367 ADGRL3Q9HAR2 1447 aa13.23□□□□□ -0.29
TRBV11-1-201ENST00000390367 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.23□□□□□ -0.29
TRBV11-1-201ENST00000390367 C19orf44Q9H6X5 657 aa13.23□□□□□ -0.29
TRBV11-1-201ENST00000390367 USP32Q8NFA0 1604 aa13.23□□□□□ -0.29
TRBV11-1-201ENST00000390367 NWD1Q149M9 1564 aa13.23□□□□□ -0.29
TRBV11-1-201ENST00000390367 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
TRBV11-1-201ENST00000390367 NUTM2FA1L443 756 aa13.22□□□□□ -0.29
TRBV11-1-201ENST00000390367 ATF3P18847 181 aa13.22□□□□□ -0.29
TRBV11-1-201ENST00000390367 ACEP12821 1306 aa13.21□□□□□ -0.29
TRBV11-1-201ENST00000390367 WDR43Q15061 677 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRBV11-1-201ENST00000390367 CPSF1Q10570 1443 aaKnown RBP13.21□□□□□ -0.3
TRBV11-1-201ENST00000390367 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
TRBV11-1-201ENST00000390367 PRR36Q9H6K5 1346 aa13.2□□□□□ -0.3
TRBV11-1-201ENST00000390367 FYB1O15117 783 aa13.2□□□□□ -0.3
TRBV11-1-201ENST00000390367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRBV11-1-201ENST00000390367 PNISRQ8TF01 805 aaKnown RBP13.2□□□□□ -0.3
TRBV11-1-201ENST00000390367 COG3Q96JB2 828 aa13.2□□□□□ -0.3
TRBV11-1-201ENST00000390367 TTC21AQ8NDW8 1320 aa13.19□□□□□ -0.3
TRBV11-1-201ENST00000390367 CD163L1Q9NR16 1453 aa13.19□□□□□ -0.3
TRBV11-1-201ENST00000390367 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
TRBV11-1-201ENST00000390367 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
TRBV11-1-201ENST00000390367 PHF8Q9UPP1 1060 aa13.19□□□□□ -0.3
TRBV11-1-201ENST00000390367 ITSN1Q15811 1721 aa13.19□□□□□ -0.3
TRBV11-1-201ENST00000390367 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRBV11-1-201ENST00000390367 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
TRBV11-1-201ENST00000390367 GGNBP2Q9H3C7 697 aa13.18□□□□□ -0.3
TRBV11-1-201ENST00000390367 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
TRBV11-1-201ENST00000390367 ESCO1Q5FWF5 840 aa13.17□□□□□ -0.3
TRBV11-1-201ENST00000390367 NUDCQ9Y266 331 aa13.17□□□□□ -0.3
TRBV11-1-201ENST00000390367 POLR3AO14802 1390 aaPredicted RBP13.17□□□□□ -0.3
TRBV11-1-201ENST00000390367 INSRP06213 1382 aa13.17□□□□□ -0.3
TRBV11-1-201ENST00000390367 MSH6P52701 1360 aa13.17□□□□□ -0.3
TRBV11-1-201ENST00000390367 TMEM94Q12767 1356 aa13.17□□□□□ -0.3
TRBV11-1-201ENST00000390367 TTC21BQ7Z4L5 1316 aa13.16□□□□□ -0.3
TRBV11-1-201ENST00000390367 DCCP43146 1447 aa13.16□□□□□ -0.3
TRBV11-1-201ENST00000390367 TNNT2P45379 298 aaPredicted RBP13.16□□□□□ -0.3
TRBV11-1-201ENST00000390367 FMN2Q9NZ56 1722 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms