RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 NASPP49321 788 aaPredicted RBP7.04□□□□□ -1.28
RFX3-204ENST00000382004 GOLGA6L7A0A1B0GV03 622 aa7.04□□□□□ -1.28
RFX3-204ENST00000382004 EXOC6Q8TAG9 804 aa7.04□□□□□ -1.28
RFX3-204ENST00000382004 NUCB2P80303 420 aa7.04□□□□□ -1.28
RFX3-204ENST00000382004 RBM10P98175 930 aaKnown RBP7.04□□□□□ -1.28
RFX3-204ENST00000382004 DDX58O95786 925 aaKnown RBP7.04□□□□□ -1.28
RFX3-204ENST00000382004 NLRP13Q86W25 1043 aa7.04□□□□□ -1.28
RFX3-204ENST00000382004 FAM193AP78312 1265 aa7.03□□□□□ -1.28
RFX3-204ENST00000382004 INTS3Q68E01 1043 aaKnown RBP7.03□□□□□ -1.28
RFX3-204ENST00000382004 COG3Q96JB2 828 aa7.03□□□□□ -1.28
RFX3-204ENST00000382004 SETD5Q9C0A6 1442 aa7.03□□□□□ -1.28
RFX3-204ENST00000382004 SPC24Q8NBT2 197 aa7.03□□□□□ -1.28
RFX3-204ENST00000382004 PHF23Q9BUL5 403 aaPredicted RBP7.03□□□□□ -1.28
RFX3-204ENST00000382004 KIF27Q86VH2 1401 aa7.03□□□□□ -1.28
RFX3-204ENST00000382004 NUP155O75694 1391 aa7.03□□□□□ -1.28
RFX3-204ENST00000382004 MAPK8IP2Q13387 824 aaPredicted RBP7.03□□□□□ -1.28
RFX3-204ENST00000382004 CCDC181Q5TID7 509 aa7.03□□□□□ -1.28
RFX3-204ENST00000382004 PPM1FP49593 454 aaPredicted RBP7.03□□□□□ -1.28
RFX3-204ENST00000382004 FKBP5Q13451 457 aaPredicted RBP7.02□□□□□ -1.29
RFX3-204ENST00000382004 ZHX3Q9H4I2 956 aa7.02□□□□□ -1.29
RFX3-204ENST00000382004 INCENPQ9NQS7 918 aa7.02□□□□□ -1.29
RFX3-204ENST00000382004 GBP2P32456 591 aaPredicted RBP7.02□□□□□ -1.29
RFX3-204ENST00000382004 DEF6Q9H4E7 631 aa7.02□□□□□ -1.29
RFX3-204ENST00000382004 EEA1Q15075 1411 aa7.02□□□□□ -1.29
RFX3-204ENST00000382004 CEBPZQ03701 1054 aaKnown RBP7.02□□□□□ -1.29
RFX3-204ENST00000382004 FAM177A1Q8N128 213 aaPredicted RBP7.02□□□□□ -1.29
RFX3-204ENST00000382004 MPHOSPH9Q99550 1183 aa7.02□□□□□ -1.29
RFX3-204ENST00000382004 ZNHIT6Q9NWK9 470 aaKnown RBP7.02□□□□□ -1.29
RFX3-204ENST00000382004 PHLDB1Q86UU1 1377 aa7.02□□□□□ -1.29
RFX3-204ENST00000382004 ERC2O15083 957 aa7.02□□□□□ -1.29
RFX3-204ENST00000382004 NF2P35240 595 aa7.02□□□□□ -1.29
RFX3-204ENST00000382004 TXLNAP40222 546 aa7.02□□□□□ -1.29
RFX3-204ENST00000382004 KINO60870 393 aaKnown RBP7.01□□□□□ -1.29
RFX3-204ENST00000382004 IBSPP21815 317 aaPredicted RBP7.01□□□□□ -1.29
RFX3-204ENST00000382004 HMGN5P82970 282 aaKnown RBP7.01□□□□□ -1.29
RFX3-204ENST00000382004 ATP2B2Q01814 1243 aa7.01□□□□□ -1.29
RFX3-204ENST00000382004 AIMP1Q12904 312 aaKnown RBP7.01□□□□□ -1.29
RFX3-204ENST00000382004 MTERF4Q7Z6M4 381 aaKnown RBP7.01□□□□□ -1.29
RFX3-204ENST00000382004 BAZ1BQ9UIG0 1483 aaKnown RBP7.01□□□□□ -1.29
RFX3-204ENST00000382004 NEBLO76041 1014 aa7.01□□□□□ -1.29
RFX3-204ENST00000382004 KIF3BO15066 747 aa7.01□□□□□ -1.29
RFX3-204ENST00000382004 E9PSI1 815 aa7.01□□□□□ -1.29
RFX3-204ENST00000382004 RRP1P56182 461 aaKnown RBP7.01□□□□□ -1.29
RFX3-204ENST00000382004 SEPT11Q9NVA2 429 aaKnown RBP7.01□□□□□ -1.29
RFX3-204ENST00000382004 TAF3Q5VWG9 929 aa7.01□□□□□ -1.29
RFX3-204ENST00000382004 TANGO6Q9C0B7 1094 aa7.01□□□□□ -1.29
RFX3-204ENST00000382004 LNPKQ9C0E8 428 aa7.01□□□□□ -1.29
RFX3-204ENST00000382004 DDX19BQ9UMR2 479 aa7.01□□□□□ -1.29
RFX3-204ENST00000382004 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.01□□□□□ -1.29
RFX3-204ENST00000382004 RIC3Q7Z5B4 369 aa7.01□□□□□ -1.29
RFX3-204ENST00000382004 CCP110O43303 1012 aa7.01□□□□□ -1.29
RFX3-204ENST00000382004 CAVIN1Q6NZI2 390 aaKnown RBP7.01□□□□□ -1.29
RFX3-204ENST00000382004 GOLGA6L10A0A0M3HER8 536 aa7□□□□□ -1.29
RFX3-204ENST00000382004 HSP90AB4PQ58FF6 505 aa7□□□□□ -1.29
RFX3-204ENST00000382004 ARHGAP35Q9NRY4 1499 aa7□□□□□ -1.29
RFX3-204ENST00000382004 CCDC112Q8NEF3 446 aa7□□□□□ -1.29
RFX3-204ENST00000382004 CEP164Q9UPV0 1460 aa7□□□□□ -1.29
RFX3-204ENST00000382004 PANK3Q9H999 370 aa7□□□□□ -1.29
RFX3-204ENST00000382004 FAM177BA6PVY3 158 aa7□□□□□ -1.29
RFX3-204ENST00000382004 SERPINC1P01008 464 aa7□□□□□ -1.29
RFX3-204ENST00000382004 FHAD1B1AJZ9 1412 aa7□□□□□ -1.29
RFX3-204ENST00000382004 MYO15BQ96JP2 1530 aa7□□□□□ -1.29
RFX3-204ENST00000382004 SART3Q15020 963 aaKnown RBP7□□□□□ -1.29
RFX3-204ENST00000382004 ROCK1Q13464 1354 aa7□□□□□ -1.29
RFX3-204ENST00000382004 DCAF8L1A6NGE4 600 aa7□□□□□ -1.29
RFX3-204ENST00000382004 TSPY26PQ9H489 355 aa7□□□□□ -1.29
RFX3-204ENST00000382004 KIF15Q9NS87 1388 aa7□□□□□ -1.29
RFX3-204ENST00000382004 LRRFIP2Q9Y608 721 aaKnown RBP7□□□□□ -1.29
RFX3-204ENST00000382004 C22orf23Q9BZE7 217 aa6.99□□□□□ -1.29
RFX3-204ENST00000382004 MATR3P43243 847 aaKnown RBP eCLIP6.99□□□□□ -1.298e-10■■■□□ 15.7
RFX3-204ENST00000382004 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.99□□□□□ -1.291e-9■■■■□ 20.1
RFX3-204ENST00000382004 WASHC2CQ9Y4E1 1318 aa6.99□□□□□ -1.29
RFX3-204ENST00000382004 PSMA5P28066 241 aa6.99□□□□□ -1.29
RFX3-204ENST00000382004 PPFIBP1Q86W92 1011 aa6.99□□□□□ -1.29
RFX3-204ENST00000382004 GIMAP7Q8NHV1 300 aa6.99□□□□□ -1.29
RFX3-204ENST00000382004 NINLQ9Y2I6 1382 aa6.99□□□□□ -1.29
RFX3-204ENST00000382004 DZIP1LQ8IYY4 767 aaKnown RBP6.99□□□□□ -1.29
RFX3-204ENST00000382004 LETM1O95202 739 aaPredicted RBP6.99□□□□□ -1.29
RFX3-204ENST00000382004 SSR1P43307 286 aaKnown RBP6.99□□□□□ -1.29
RFX3-204ENST00000382004 MPNDQ8N594 471 aa6.99□□□□□ -1.29
RFX3-204ENST00000382004 LUC7LQ9NQ29 371 aaKnown RBP6.99□□□□□ -1.29
RFX3-204ENST00000382004 MYBBP1AQ9BQG0 1328 aaKnown RBP6.99□□□□□ -1.29
RFX3-204ENST00000382004 RABEP1Q15276 862 aa6.99□□□□□ -1.29
RFX3-204ENST00000382004 ERICH4A6NGS2 130 aa6.98□□□□□ -1.29
RFX3-204ENST00000382004 RIPK4P57078 832 aa6.98□□□□□ -1.29
RFX3-204ENST00000382004 PKNOX2Q96KN3 472 aa6.98□□□□□ -1.29
RFX3-204ENST00000382004 FSD1Q9BTV5 496 aa6.98□□□□□ -1.29
RFX3-204ENST00000382004 API5Q9BZZ5 524 aaKnown RBP6.98□□□□□ -1.29
RFX3-204ENST00000382004 TSPYL4Q9UJ04 414 aa6.98□□□□□ -1.29
RFX3-204ENST00000382004 MRE11P49959 708 aa6.98□□□□□ -1.29
RFX3-204ENST00000382004 DNAJC2Q99543 621 aaKnown RBP6.98□□□□□ -1.29
RFX3-204ENST00000382004 PPP1R1BQ9UD71 204 aaPredicted RBP6.98□□□□□ -1.29
RFX3-204ENST00000382004 CNTROBQ8N137 903 aa6.98□□□□□ -1.29
RFX3-204ENST00000382004 APAF1O14727 1248 aa6.98□□□□□ -1.29
RFX3-204ENST00000382004 PSME1Q06323 249 aa6.98□□□□□ -1.29
RFX3-204ENST00000382004 TBC1D2BQ9UPU7 963 aa6.97□□□□□ -1.29
RFX3-204ENST00000382004 TNIKQ9UKE5 1360 aa6.97□□□□□ -1.29
RFX3-204ENST00000382004 EIF3JO75822 258 aaKnown RBP6.97□□□□□ -1.29
RFX3-204ENST00000382004 SLC3A2P08195 630 aaKnown RBP6.97□□□□□ -1.29
RFX3-204ENST00000382004 STK38Q15208 465 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms