RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 TECPR2O15040 1411 aa23.92■■□□□ 1.42
LYSMD4-203ENST00000378904 MRS2Q9HD23 443 aa23.92■■□□□ 1.42
LYSMD4-203ENST00000378904 CPS1P31327 1500 aa23.91■■□□□ 1.42
LYSMD4-203ENST00000378904 PARD3Q8TEW0 1356 aa23.91■■□□□ 1.42
LYSMD4-203ENST00000378904 WAPLQ7Z5K2 1190 aa23.91■■□□□ 1.42
LYSMD4-203ENST00000378904 KNSTRNQ9Y448 316 aa23.91■■□□□ 1.42
LYSMD4-203ENST00000378904 PLEKHH1Q9ULM0 1364 aa23.91■■□□□ 1.42
LYSMD4-203ENST00000378904 CC2D1BQ5T0F9 858 aaKnown RBP23.89■■□□□ 1.42
LYSMD4-203ENST00000378904 SLC26A8Q96RN1 970 aa23.89■■□□□ 1.42
LYSMD4-203ENST00000378904 DIP2AQ14689 1571 aa23.89■■□□□ 1.41
LYSMD4-203ENST00000378904 CABP2Q9NPB3 220 aa23.89■■□□□ 1.41
LYSMD4-203ENST00000378904 TMC1Q8TDI8 760 aa23.88■■□□□ 1.41
LYSMD4-203ENST00000378904 MYBBP1AQ9BQG0 1328 aaKnown RBP23.88■■□□□ 1.41
LYSMD4-203ENST00000378904 FAM135BQ49AJ0 1406 aa23.88■■□□□ 1.41
LYSMD4-203ENST00000378904 SIRT1Q96EB6 747 aa23.87■■□□□ 1.41
LYSMD4-203ENST00000378904 SRPK2P78362 688 aaKnown RBP23.86■■□□□ 1.41
LYSMD4-203ENST00000378904 SLC12A5Q9H2X9 1139 aa23.86■■□□□ 1.41
LYSMD4-203ENST00000378904 TBX22Q9Y458 520 aa23.86■■□□□ 1.41
LYSMD4-203ENST00000378904 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
LYSMD4-203ENST00000378904 CARD14Q9BXL6 1004 aa23.84■■□□□ 1.41
LYSMD4-203ENST00000378904 PTPRUQ92729 1446 aa23.84■■□□□ 1.41
LYSMD4-203ENST00000378904 ANKLE2Q86XL3 938 aa23.83■■□□□ 1.4
LYSMD4-203ENST00000378904 CDK19Q9BWU1 502 aa23.83■■□□□ 1.4
LYSMD4-203ENST00000378904 ATAD2Q6PL18 1390 aa23.82■■□□□ 1.4
LYSMD4-203ENST00000378904 ROBO2Q9HCK4 1378 aa23.82■■□□□ 1.4
LYSMD4-203ENST00000378904 NPC1L1Q9UHC9 1359 aa23.82■■□□□ 1.4
LYSMD4-203ENST00000378904 BRD4O60885 1362 aaPredicted RBP23.81■■□□□ 1.4
LYSMD4-203ENST00000378904 NINLQ9Y2I6 1382 aa23.81■■□□□ 1.4
LYSMD4-203ENST00000378904 FAM9BQ8IZU0 186 aa23.79■■□□□ 1.4
LYSMD4-203ENST00000378904 ANKRD36BQ8N2N9 1353 aa23.78■■□□□ 1.4
LYSMD4-203ENST00000378904 NLRP13Q86W25 1043 aa23.78■■□□□ 1.4
LYSMD4-203ENST00000378904 NSD3Q9BZ95 1437 aa23.78■■□□□ 1.4
LYSMD4-203ENST00000378904 AMOTL2Q9Y2J4 779 aa23.78■■□□□ 1.4
LYSMD4-203ENST00000378904 USP32Q8NFA0 1604 aa23.76■■□□□ 1.39
LYSMD4-203ENST00000378904 XRN1Q8IZH2 1706 aaKnown RBP23.76■■□□□ 1.39
LYSMD4-203ENST00000378904 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.76■■□□□ 1.39
LYSMD4-203ENST00000378904 WASLO00401 505 aaPredicted RBP23.75■■□□□ 1.39
LYSMD4-203ENST00000378904 PTCH1Q13635 1447 aa23.74■■□□□ 1.39
LYSMD4-203ENST00000378904 PIK3R4Q99570 1358 aa23.74■■□□□ 1.39
LYSMD4-203ENST00000378904 ADGRB2O60241 1585 aa23.74■■□□□ 1.39
LYSMD4-203ENST00000378904 A0A1W2PP64 1363 aa23.72■■□□□ 1.39
LYSMD4-203ENST00000378904 CD163L1Q9NR16 1453 aa23.71■■□□□ 1.39
LYSMD4-203ENST00000378904 PNISRQ8TF01 805 aaKnown RBP23.71■■□□□ 1.39
LYSMD4-203ENST00000378904 CHD2O14647 1828 aaKnown RBP23.71■■□□□ 1.39
LYSMD4-203ENST00000378904 HNRNPUQ00839 825 aaKnown RBP eCLIP23.7■■□□□ 1.38
LYSMD4-203ENST00000378904 NPHP4O75161 1426 aaPredicted RBP23.7■■□□□ 1.38
LYSMD4-203ENST00000378904 PPP2R1AP30153 589 aa23.69■■□□□ 1.38
LYSMD4-203ENST00000378904 TERF2IPQ9NYB0 399 aa23.69■■□□□ 1.38
LYSMD4-203ENST00000378904 CABP1Q9NZU7 370 aa23.69■■□□□ 1.38
LYSMD4-203ENST00000378904 CGNL1Q0VF96 1302 aa23.68■■□□□ 1.38
LYSMD4-203ENST00000378904 ATP7BP35670 1465 aa23.66■■□□□ 1.38
LYSMD4-203ENST00000378904 KCNA6P17658 529 aa23.66■■□□□ 1.38
LYSMD4-203ENST00000378904 KDM4FA0A1W2PPD8 638 aa23.65■■□□□ 1.38
LYSMD4-203ENST00000378904 HDGFL2Q7Z4V5 671 aaPredicted RBP23.65■■□□□ 1.38
LYSMD4-203ENST00000378904 NUDT16Q96DE0 195 aaKnown RBP23.65■■□□□ 1.38
LYSMD4-203ENST00000378904 PPIP5K1Q6PFW1 1433 aa23.65■■□□□ 1.38
LYSMD4-203ENST00000378904 NCKAP5LQ9HCH0 1330 aa23.64■■□□□ 1.38
LYSMD4-203ENST00000378904 NSD2O96028 1365 aa23.63■■□□□ 1.37
LYSMD4-203ENST00000378904 MORC1Q86VD1 984 aa23.62■■□□□ 1.37
LYSMD4-203ENST00000378904 CCDC61Q9Y6R9 512 aa23.62■■□□□ 1.37
LYSMD4-203ENST00000378904 PRR36Q9H6K5 1346 aa23.61■■□□□ 1.37
LYSMD4-203ENST00000378904 TOPAZ1Q8N9V7 1692 aa23.61■■□□□ 1.37
LYSMD4-203ENST00000378904 ANKRD26Q9UPS8 1709 aa23.6■■□□□ 1.37
LYSMD4-203ENST00000378904 CDC42BPGQ6DT37 1551 aa23.6■■□□□ 1.37
LYSMD4-203ENST00000378904 ITSN1Q15811 1721 aa23.6■■□□□ 1.37
LYSMD4-203ENST00000378904 KIF20BQ96Q89 1820 aa23.6■■□□□ 1.37
LYSMD4-203ENST00000378904 AKAP12Q02952 1782 aa23.59■■□□□ 1.37
LYSMD4-203ENST00000378904 CPSF1Q10570 1443 aaKnown RBP23.58■■□□□ 1.37
LYSMD4-203ENST00000378904 MON2Q7Z3U7 1717 aa23.57■■□□□ 1.36
LYSMD4-203ENST00000378904 NALCNQ8IZF0 1738 aa23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 NUTM2FA1L443 756 aa23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 FYB1O15117 783 aa23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 RGPD8O14715 1765 aaPredicted RBP23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 TNNT2P45379 298 aaPredicted RBP23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 GGNBP2Q9H3C7 697 aa23.54■■□□□ 1.36
LYSMD4-203ENST00000378904 ZBED9Q6R2W3 1325 aa23.53■■□□□ 1.36
LYSMD4-203ENST00000378904 NWD1Q149M9 1564 aa23.53■■□□□ 1.36
LYSMD4-203ENST00000378904 EDC4Q6P2E9 1401 aaKnown RBP23.52■■□□□ 1.36
LYSMD4-203ENST00000378904 FMN2Q9NZ56 1722 aa23.52■■□□□ 1.36
LYSMD4-203ENST00000378904 HSPA2P54652 639 aa23.5■■□□□ 1.35
LYSMD4-203ENST00000378904 NKTRP30414 1462 aaKnown RBP23.5■■□□□ 1.35
LYSMD4-203ENST00000378904 PLEKHG3A1L390 1219 aa23.5■■□□□ 1.35
LYSMD4-203ENST00000378904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.5■■□□□ 1.35
LYSMD4-203ENST00000378904 INSRP06213 1382 aa23.5■■□□□ 1.35
LYSMD4-203ENST00000378904 ZNF692Q9BU19 519 aaPredicted RBP23.49■■□□□ 1.35
LYSMD4-203ENST00000378904 POLR3AO14802 1390 aaPredicted RBP23.49■■□□□ 1.35
LYSMD4-203ENST00000378904 LMTK3Q96Q04 1460 aa23.49■■□□□ 1.35
LYSMD4-203ENST00000378904 WDR43Q15061 677 aaKnown RBP eCLIP23.47■■□□□ 1.35
LYSMD4-203ENST00000378904 BLMP54132 1417 aaPredicted RBP23.47■■□□□ 1.35
LYSMD4-203ENST00000378904 ANKARQ7Z5J8 1434 aa23.47■■□□□ 1.35
LYSMD4-203ENST00000378904 ACEP12821 1306 aa23.47■■□□□ 1.35
LYSMD4-203ENST00000378904 RBM33Q96EV2 1170 aaKnown RBP23.47■■□□□ 1.35
LYSMD4-203ENST00000378904 NRKQ7Z2Y5 1582 aa23.46■■□□□ 1.35
LYSMD4-203ENST00000378904 ADAMTS8Q9UP79 889 aa23.46■■□□□ 1.35
LYSMD4-203ENST00000378904 ADGRL3Q9HAR2 1447 aa23.45■■□□□ 1.35
LYSMD4-203ENST00000378904 MTHFSP49914 203 aa23.45■■□□□ 1.34
LYSMD4-203ENST00000378904 SHPRHQ149N8 1683 aa23.43■■□□□ 1.34
LYSMD4-203ENST00000378904 SENP3-EIF4A1A0A087X0R7 540 aa23.43■■□□□ 1.34
LYSMD4-203ENST00000378904 NME9Q86XW9 330 aa23.42■■□□□ 1.34
LYSMD4-203ENST00000378904 USP6P35125 1406 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms