RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 SIGLEC1Q9BZZ2 1709 aa20.7■□□□□ 0.9
ARHGEF1-204ENST00000378152 MROH2AA6NES4 1674 aa20.7■□□□□ 0.9
ARHGEF1-204ENST00000378152 IQGAP1P46940 1657 aa20.7■□□□□ 0.9
ARHGEF1-204ENST00000378152 PIK3C2GO75747 1445 aa20.7■□□□□ 0.9
ARHGEF1-204ENST00000378152 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
ARHGEF1-204ENST00000378152 SYNMO15061 1565 aa20.69■□□□□ 0.9
ARHGEF1-204ENST00000378152 MYOM2P54296 1465 aa20.69■□□□□ 0.9
ARHGEF1-204ENST00000378152 SCAF11Q99590 1463 aaKnown RBP20.69■□□□□ 0.9
ARHGEF1-204ENST00000378152 NOS1P29475 1434 aa20.68■□□□□ 0.9
ARHGEF1-204ENST00000378152 EIF3AQ14152 1382 aaKnown RBP20.66■□□□□ 0.9
ARHGEF1-204ENST00000378152 E9PSI1 815 aa20.66■□□□□ 0.9
ARHGEF1-204ENST00000378152 CANXP27824 592 aaKnown RBP20.66■□□□□ 0.9
ARHGEF1-204ENST00000378152 UGGT1Q9NYU2 1555 aa20.66■□□□□ 0.9
ARHGEF1-204ENST00000378152 PANK1Q8TE04 598 aa20.65■□□□□ 0.9
ARHGEF1-204ENST00000378152 COG6Q9Y2V7 657 aa20.65■□□□□ 0.9
ARHGEF1-204ENST00000378152 NRXN1Q9ULB1 1477 aa20.64■□□□□ 0.89
ARHGEF1-204ENST00000378152 SEC24BO95487 1268 aa20.64■□□□□ 0.89
ARHGEF1-204ENST00000378152 MYOM1P52179 1685 aa20.64■□□□□ 0.89
ARHGEF1-204ENST00000378152 NEUROD2Q15784 382 aa20.63■□□□□ 0.89
ARHGEF1-204ENST00000378152 PPLO60437 1756 aa20.62■□□□□ 0.89
ARHGEF1-204ENST00000378152 CARD14Q9BXL6 1004 aa20.62■□□□□ 0.89
ARHGEF1-204ENST00000378152 PREX1Q8TCU6 1659 aa20.62■□□□□ 0.89
ARHGEF1-204ENST00000378152 CFAP70Q5T0N1 1121 aa20.61■□□□□ 0.89
ARHGEF1-204ENST00000378152 USP19O94966 1318 aa20.61■□□□□ 0.89
ARHGEF1-204ENST00000378152 CENPJQ9HC77 1338 aaPredicted RBP20.61■□□□□ 0.89
ARHGEF1-204ENST00000378152 CLUAP1Q96AJ1 413 aa20.6■□□□□ 0.89
ARHGEF1-204ENST00000378152 NPC1L1Q9UHC9 1359 aa20.59■□□□□ 0.89
ARHGEF1-204ENST00000378152 TNNT2P45379 298 aaPredicted RBP20.59■□□□□ 0.89
ARHGEF1-204ENST00000378152 RRP7AQ9Y3A4 280 aaKnown RBP20.59■□□□□ 0.89
ARHGEF1-204ENST00000378152 CGNL1Q0VF96 1302 aa20.59■□□□□ 0.89
ARHGEF1-204ENST00000378152 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
ARHGEF1-204ENST00000378152 GGT6Q6P531 493 aa20.58■□□□□ 0.89
ARHGEF1-204ENST00000378152 WWC1Q8IX03 1113 aa20.58■□□□□ 0.88
ARHGEF1-204ENST00000378152 KDM5AP29375 1690 aaKnown RBP20.57■□□□□ 0.88
ARHGEF1-204ENST00000378152 PDE3AQ14432 1141 aa20.57■□□□□ 0.88
ARHGEF1-204ENST00000378152 SLKQ9H2G2 1235 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF1-204ENST00000378152 TNNQ9UQP3 1299 aa20.55■□□□□ 0.88
ARHGEF1-204ENST00000378152 ADGRF5Q8IZF2 1346 aa20.54■□□□□ 0.88
ARHGEF1-204ENST00000378152 BCL2L13Q9BXK5 485 aa20.54■□□□□ 0.88
ARHGEF1-204ENST00000378152 ERVK-7P63135 1459 aa20.53■□□□□ 0.88
ARHGEF1-204ENST00000378152 MAPK8IP3Q9UPT6 1336 aa20.53■□□□□ 0.88
ARHGEF1-204ENST00000378152 SETBP1Q9Y6X0 1596 aa20.53■□□□□ 0.88
ARHGEF1-204ENST00000378152 CLTCQ00610 1675 aaKnown RBP20.52■□□□□ 0.88
ARHGEF1-204ENST00000378152 POGKQ9P215 609 aa20.52■□□□□ 0.88
ARHGEF1-204ENST00000378152 CFAP65Q6ZU64 1925 aaKnown RBP20.51■□□□□ 0.87
ARHGEF1-204ENST00000378152 BECN1Q14457 450 aa20.5■□□□□ 0.87
ARHGEF1-204ENST00000378152 VIRMAQ69YN4 1812 aaKnown RBP20.5■□□□□ 0.87
ARHGEF1-204ENST00000378152 SPATA31D1Q6ZQQ2 1576 aa20.5■□□□□ 0.87
ARHGEF1-204ENST00000378152 RPGRIP1LQ68CZ1 1315 aa20.5■□□□□ 0.87
ARHGEF1-204ENST00000378152 RLBP1P12271 317 aa20.49■□□□□ 0.87
ARHGEF1-204ENST00000378152 MORC1Q86VD1 984 aa20.49■□□□□ 0.87
ARHGEF1-204ENST00000378152 PCDHB15Q9Y5E8 787 aa20.49■□□□□ 0.87
ARHGEF1-204ENST00000378152 NEXMIFQ5QGS0 1516 aa20.49■□□□□ 0.87
ARHGEF1-204ENST00000378152 TMEM131LA2VDJ0 1609 aa20.49■□□□□ 0.87
ARHGEF1-204ENST00000378152 MYO3AQ8NEV4 1616 aa20.49■□□□□ 0.87
ARHGEF1-204ENST00000378152 RARSP54136 660 aaKnown RBP20.49■□□□□ 0.87
ARHGEF1-204ENST00000378152 NGEFQ8N5V2 710 aa20.48■□□□□ 0.87
ARHGEF1-204ENST00000378152 TCP11L2Q8N4U5 519 aa20.47■□□□□ 0.87
ARHGEF1-204ENST00000378152 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
ARHGEF1-204ENST00000378152 UBE2Q2Q8WVN8 375 aa20.46■□□□□ 0.87
ARHGEF1-204ENST00000378152 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
ARHGEF1-204ENST00000378152 PDZRN3Q9UPQ7 1066 aa20.46■□□□□ 0.87
ARHGEF1-204ENST00000378152 RUNDC1Q96C34 613 aa20.45■□□□□ 0.86
ARHGEF1-204ENST00000378152 ZFYVE9O95405 1425 aa20.45■□□□□ 0.86
ARHGEF1-204ENST00000378152 PMFBP1Q8TBY8 1022 aa20.45■□□□□ 0.86
ARHGEF1-204ENST00000378152 SLC12A5Q9H2X9 1139 aa20.45■□□□□ 0.86
ARHGEF1-204ENST00000378152 EIF5BO60841 1220 aaKnown RBP20.44■□□□□ 0.86
ARHGEF1-204ENST00000378152 CHGAP10645 457 aaKnown RBP20.44■□□□□ 0.86
ARHGEF1-204ENST00000378152 SPRYD3Q8NCJ5 442 aa20.44■□□□□ 0.86
ARHGEF1-204ENST00000378152 NSD3Q9BZ95 1437 aa20.44■□□□□ 0.86
ARHGEF1-204ENST00000378152 MYO5BQ9ULV0 1848 aa20.44■□□□□ 0.86
ARHGEF1-204ENST00000378152 TRAK1Q9UPV9 953 aa20.44■□□□□ 0.86
ARHGEF1-204ENST00000378152 NLRP1Q9C000 1473 aa20.43■□□□□ 0.86
ARHGEF1-204ENST00000378152 UPF2Q9HAU5 1272 aaKnown RBP20.43■□□□□ 0.86
ARHGEF1-204ENST00000378152 ARXQ96QS3 562 aa20.43■□□□□ 0.86
ARHGEF1-204ENST00000378152 SLC52A1Q9NWF4 448 aa20.43■□□□□ 0.86
ARHGEF1-204ENST00000378152 SLC24A1O60721 1099 aa20.42■□□□□ 0.86
ARHGEF1-204ENST00000378152 ADGRB1O14514 1584 aa20.41■□□□□ 0.86
ARHGEF1-204ENST00000378152 MTHFSP49914 203 aa20.4■□□□□ 0.86
ARHGEF1-204ENST00000378152 TBC1D32Q96NH3 1257 aa20.4■□□□□ 0.86
ARHGEF1-204ENST00000378152 TBC1D2Q9BYX2 928 aa20.4■□□□□ 0.86
ARHGEF1-204ENST00000378152 ANTXR1Q9H6X2 564 aa20.39■□□□□ 0.85
ARHGEF1-204ENST00000378152 SHPRHQ149N8 1683 aa20.38■□□□□ 0.85
ARHGEF1-204ENST00000378152 RWDD1Q9H446 243 aaPredicted RBP20.37■□□□□ 0.85
ARHGEF1-204ENST00000378152 FAM43AQ8N2R8 423 aa20.37■□□□□ 0.85
ARHGEF1-204ENST00000378152 TMEM132EQ6IEE7 984 aa20.36■□□□□ 0.85
ARHGEF1-204ENST00000378152 WDR63Q8IWG1 891 aa20.36■□□□□ 0.85
ARHGEF1-204ENST00000378152 IDI1Q13907 227 aa20.34■□□□□ 0.85
ARHGEF1-204ENST00000378152 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF1-204ENST00000378152 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF1-204ENST00000378152 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
ARHGEF1-204ENST00000378152 SBNO2Q9Y2G9 1366 aa20.34■□□□□ 0.85
ARHGEF1-204ENST00000378152 IQSEC2Q5JU85 1478 aa20.33■□□□□ 0.85
ARHGEF1-204ENST00000378152 FTSJ3Q8IY81 847 aaKnown RBP20.33■□□□□ 0.85
ARHGEF1-204ENST00000378152 CFAP53Q96M91 514 aa20.33■□□□□ 0.84
ARHGEF1-204ENST00000378152 C14orf93Q9H972 538 aaKnown RBP20.33■□□□□ 0.84
ARHGEF1-204ENST00000378152 MVPQ14764 893 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-204ENST00000378152 TSR2Q969E8 191 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-204ENST00000378152 MFAP1P55081 439 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-204ENST00000378152 AAMPQ13685 434 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms