RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 KIF15Q9NS87 1388 aa15.35■□□□□ 0.05
UBD-203ENST00000377050 SPATA31E1Q6ZUB1 1445 aa15.34■□□□□ 0.05
UBD-203ENST00000377050 WASHC2AQ641Q2 1341 aa15.34■□□□□ 0.05
UBD-203ENST00000377050 LMTK2Q8IWU2 1503 aa15.33■□□□□ 0.05
UBD-203ENST00000377050 NEFLP07196 543 aa15.33■□□□□ 0.04
UBD-203ENST00000377050 ERICH6BQ5W0A0 696 aa15.33■□□□□ 0.04
UBD-203ENST00000377050 L3MBTL2Q969R5 705 aa15.33■□□□□ 0.04
UBD-203ENST00000377050 TRPC5Q9UL62 973 aaPredicted RBP15.33■□□□□ 0.04
UBD-203ENST00000377050 DCCP43146 1447 aa15.33■□□□□ 0.04
UBD-203ENST00000377050 CCDC7Q96M83 1385 aa15.32■□□□□ 0.04
UBD-203ENST00000377050 PIK3R4Q99570 1358 aa15.32■□□□□ 0.04
UBD-203ENST00000377050 ZFYVE9O95405 1425 aa15.32■□□□□ 0.04
UBD-203ENST00000377050 NOS1P29475 1434 aa15.32■□□□□ 0.04
UBD-203ENST00000377050 RIMS2Q9UQ26 1411 aa15.32■□□□□ 0.04
UBD-203ENST00000377050 LRP5O75197 1615 aa15.32■□□□□ 0.04
UBD-203ENST00000377050 USP21Q9UK80 565 aa15.31■□□□□ 0.04
UBD-203ENST00000377050 PNPLA6Q8IY17 1366 aa15.31■□□□□ 0.04
UBD-203ENST00000377050 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
UBD-203ENST00000377050 ADAMTS2O95450 1211 aa15.3■□□□□ 0.04
UBD-203ENST00000377050 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.3■□□□□ 0.04
UBD-203ENST00000377050 HIRIP3Q9BW71 556 aaPredicted RBP15.3■□□□□ 0.04
UBD-203ENST00000377050 ANKRD30AQ9BXX3 1397 aa15.3■□□□□ 0.04
UBD-203ENST00000377050 TSHZ2Q9NRE2 1034 aa15.3■□□□□ 0.04
UBD-203ENST00000377050 MYO5BQ9ULV0 1848 aa15.3■□□□□ 0.04
UBD-203ENST00000377050 TRPM2O94759 1503 aa15.27■□□□□ 0.04
UBD-203ENST00000377050 FKBP8Q14318 412 aa15.26■□□□□ 0.03
UBD-203ENST00000377050 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
UBD-203ENST00000377050 MST1RQ04912 1400 aa15.26■□□□□ 0.03
UBD-203ENST00000377050 ADAMTS13Q76LX8 1427 aa15.25■□□□□ 0.03
UBD-203ENST00000377050 AMOTL2Q9Y2J4 779 aa15.24■□□□□ 0.03
UBD-203ENST00000377050 ATRNO75882 1429 aa15.24■□□□□ 0.03
UBD-203ENST00000377050 BLMP54132 1417 aaPredicted RBP15.24■□□□□ 0.03
UBD-203ENST00000377050 PTCH1Q13635 1447 aa15.24■□□□□ 0.03
UBD-203ENST00000377050 TMEM131LA2VDJ0 1609 aa15.24■□□□□ 0.03
UBD-203ENST00000377050 SF3B2Q13435 895 aaKnown RBP15.23■□□□□ 0.03
UBD-203ENST00000377050 NBPF8Q3BBV2 869 aa15.22■□□□□ 0.03
UBD-203ENST00000377050 FNBP4Q8N3X1 1017 aaPredicted RBP15.22■□□□□ 0.03
UBD-203ENST00000377050 PRKRIP1Q9H875 184 aaPredicted RBP15.22■□□□□ 0.03
UBD-203ENST00000377050 ANKRD50Q9ULJ7 1429 aa15.22■□□□□ 0.03
UBD-203ENST00000377050 EP400Q96L91 3159 aa15.21■□□□□ 0.03
UBD-203ENST00000377050 CHGAP10645 457 aaKnown RBP15.21■□□□□ 0.03
UBD-203ENST00000377050 ROCK2O75116 1388 aaKnown RBP15.2■□□□□ 0.02
UBD-203ENST00000377050 RALGAPBQ86X10 1494 aa15.2■□□□□ 0.02
UBD-203ENST00000377050 DDX17Q92841 729 aaKnown RBP15.19■□□□□ 0.02
UBD-203ENST00000377050 KIF7Q2M1P5 1343 aa15.17■□□□□ 0.02
UBD-203ENST00000377050 XRN1Q8IZH2 1706 aaKnown RBP15.17■□□□□ 0.02
UBD-203ENST00000377050 PTPRUQ92729 1446 aa15.17■□□□□ 0.02
UBD-203ENST00000377050 ZBED9Q6R2W3 1325 aa15.17■□□□□ 0.02
UBD-203ENST00000377050 LAMC1P11047 1609 aa15.16■□□□□ 0.02
UBD-203ENST00000377050 ADGRL3Q9HAR2 1447 aa15.16■□□□□ 0.02
UBD-203ENST00000377050 UNC13BO14795 1591 aa15.15■□□□□ 0.02
UBD-203ENST00000377050 C11orf95C9JLR9 678 aaPredicted RBP15.15■□□□□ 0.02
UBD-203ENST00000377050 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
UBD-203ENST00000377050 DEFB132Q7Z7B7 95 aa15.15■□□□□ 0.02
UBD-203ENST00000377050 GJD4Q96KN9 370 aaPredicted RBP15.15■□□□□ 0.02
UBD-203ENST00000377050 COL22A1Q8NFW1 1626 aaPredicted RBP15.14■□□□□ 0.01
UBD-203ENST00000377050 KTN1Q86UP2 1357 aaKnown RBP15.14■□□□□ 0.01
UBD-203ENST00000377050 SPHKAPQ2M3C7 1700 aa15.13■□□□□ 0.01
UBD-203ENST00000377050 MARF1Q9Y4F3 1742 aaKnown RBP15.13■□□□□ 0.01
UBD-203ENST00000377050 SOS2Q07890 1332 aaPredicted RBP15.13■□□□□ 0.01
UBD-203ENST00000377050 BCL9LQ86UU0 1499 aa15.12■□□□□ 0.01
UBD-203ENST00000377050 NALCNQ8IZF0 1738 aa15.12■□□□□ 0.01
UBD-203ENST00000377050 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.12■□□□□ 0.01
UBD-203ENST00000377050 USP47Q96K76 1375 aa15.11■□□□□ 0.01
UBD-203ENST00000377050 C1orf167Q5SNV9 1468 aa15.11■□□□□ 0.01
UBD-203ENST00000377050 PSDA5PKW4 1024 aaPredicted RBP15.1■□□□□ 0.01
UBD-203ENST00000377050 YY1P25490 414 aa15.1■□□□□ 0.01
UBD-203ENST00000377050 NUP155O75694 1391 aa15.09■□□□□ 0.01
UBD-203ENST00000377050 BRWD3Q6RI45 1802 aa15.08■□□□□ 0.01
UBD-203ENST00000377050 BAG6P46379 1132 aa15.08■□□□□ 0
UBD-203ENST00000377050 MYOM2P54296 1465 aa15.08■□□□□ 0
UBD-203ENST00000377050 MRS2Q9HD23 443 aa15.07■□□□□ 0
UBD-203ENST00000377050 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
UBD-203ENST00000377050 PPP4R2Q9NY27 417 aa15.06■□□□□ 0
UBD-203ENST00000377050 SMG6Q86US8 1419 aaKnown RBP15.06■□□□□ 0
UBD-203ENST00000377050 GLI3P10071 1580 aa15.06■□□□□ 0
UBD-203ENST00000377050 UNC5CLQ8IV45 518 aa15.05■□□□□ -0
UBD-203ENST00000377050 U3KPZ7 1027 aaPredicted RBP15.05■□□□□ -0
UBD-203ENST00000377050 E9PCH4 1651 aa15.05■□□□□ -0
UBD-203ENST00000377050 IQGAP3Q86VI3 1631 aa15.04■□□□□ -0
UBD-203ENST00000377050 ORAI2Q96SN7 254 aa15.04■□□□□ -0
UBD-203ENST00000377050 ANP32EQ9BTT0 268 aa15.04■□□□□ -0
UBD-203ENST00000377050 METP08581 1390 aa15.03■□□□□ -0
UBD-203ENST00000377050 NPHP3Q7Z494 1330 aa15.03■□□□□ -0
UBD-203ENST00000377050 CCDC184Q52MB2 194 aa15.03■□□□□ -0
UBD-203ENST00000377050 INSRP06213 1382 aa15.02■□□□□ -0
UBD-203ENST00000377050 SEPT12Q8IYM1 358 aa15.02■□□□□ -0
UBD-203ENST00000377050 RBM19Q9Y4C8 960 aaKnown RBP15.02■□□□□ -0
UBD-203ENST00000377050 GPRASP1Q5JY77 1395 aa15.01□□□□□ -0.01
UBD-203ENST00000377050 CAPN15O75808 1086 aa15.01□□□□□ -0.01
UBD-203ENST00000377050 KRT27Q7Z3Y8 459 aa15.01□□□□□ -0.01
UBD-203ENST00000377050 TRPM1Q7Z4N2 1603 aa15.01□□□□□ -0.01
UBD-203ENST00000377050 RNF123Q5XPI4 1314 aa15□□□□□ -0.01
UBD-203ENST00000377050 SLIT2O94813 1529 aa15□□□□□ -0.01
UBD-203ENST00000377050 BRD4O60885 1362 aaPredicted RBP14.99□□□□□ -0.01
UBD-203ENST00000377050 RALBP1Q15311 655 aa14.99□□□□□ -0.01
UBD-203ENST00000377050 ZNF326Q5BKZ1 582 aaKnown RBP14.99□□□□□ -0.01
UBD-203ENST00000377050 FANCIQ9NVI1 1328 aa14.98□□□□□ -0.01
UBD-203ENST00000377050 R3HDM1Q15032 1099 aaKnown RBP14.98□□□□□ -0.01
UBD-203ENST00000377050 PRAG1Q86YV5 1406 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms