RNA–Protein interactions for RNA: ENST00000372858.7

PABPC4-203, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-203ENST00000372858 TRAK1Q9UPV9 953 aa21.19■□□□□ 0.98
PABPC4-203ENST00000372858 RARSP54136 660 aaKnown RBP21.19■□□□□ 0.98
PABPC4-203ENST00000372858 RUNDC1Q96C34 613 aa21.19■□□□□ 0.98
PABPC4-203ENST00000372858 POGKQ9P215 609 aa21.18■□□□□ 0.98
PABPC4-203ENST00000372858 NSD3Q9BZ95 1437 aa21.18■□□□□ 0.98
PABPC4-203ENST00000372858 FAM43AQ8N2R8 423 aa21.17■□□□□ 0.98
PABPC4-203ENST00000372858 RRP7AQ9Y3A4 280 aaKnown RBP21.17■□□□□ 0.98
PABPC4-203ENST00000372858 SLC12A5Q9H2X9 1139 aa21.17■□□□□ 0.98
PABPC4-203ENST00000372858 ABCA9Q8IUA7 1624 aa21.16■□□□□ 0.98
PABPC4-203ENST00000372858 NOS1P29475 1434 aa21.16■□□□□ 0.98
PABPC4-203ENST00000372858 EFCAB6Q5THR3 1501 aa21.16■□□□□ 0.98
PABPC4-203ENST00000372858 TCP11L2Q8N4U5 519 aa21.16■□□□□ 0.98
PABPC4-203ENST00000372858 PCDHB15Q9Y5E8 787 aa21.16■□□□□ 0.98
PABPC4-203ENST00000372858 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
PABPC4-203ENST00000372858 NRXN1Q9ULB1 1477 aa21.14■□□□□ 0.97
PABPC4-203ENST00000372858 PDZRN3Q9UPQ7 1066 aa21.14■□□□□ 0.97
PABPC4-203ENST00000372858 MYO3AQ8NEV4 1616 aa21.13■□□□□ 0.97
PABPC4-203ENST00000372858 VIRMAQ69YN4 1812 aaKnown RBP21.13■□□□□ 0.97
PABPC4-203ENST00000372858 RLBP1P12271 317 aa21.13■□□□□ 0.97
PABPC4-203ENST00000372858 CFAP53Q96M91 514 aa21.13■□□□□ 0.97
PABPC4-203ENST00000372858 TBC1D32Q96NH3 1257 aa21.13■□□□□ 0.97
PABPC4-203ENST00000372858 IFT172Q9UG01 1749 aa21.13■□□□□ 0.97
PABPC4-203ENST00000372858 WDR63Q8IWG1 891 aa21.13■□□□□ 0.97
PABPC4-203ENST00000372858 ANTXR1Q9H6X2 564 aa21.13■□□□□ 0.97
PABPC4-203ENST00000372858 RWDD1Q9H446 243 aaPredicted RBP21.12■□□□□ 0.97
PABPC4-203ENST00000372858 NLRP1Q9C000 1473 aa21.12■□□□□ 0.97
PABPC4-203ENST00000372858 MTHFSP49914 203 aa21.11■□□□□ 0.97
PABPC4-203ENST00000372858 C14orf93Q9H972 538 aaKnown RBP21.11■□□□□ 0.97
PABPC4-203ENST00000372858 BCL2L13Q9BXK5 485 aa21.11■□□□□ 0.97
PABPC4-203ENST00000372858 TNNQ9UQP3 1299 aa21.11■□□□□ 0.97
PABPC4-203ENST00000372858 MROH2AA6NES4 1674 aa21.11■□□□□ 0.97
PABPC4-203ENST00000372858 EIF5BO60841 1220 aaKnown RBP21.1■□□□□ 0.97
PABPC4-203ENST00000372858 ZMYM3Q14202 1370 aa21.1■□□□□ 0.97
PABPC4-203ENST00000372858 L1TD1Q5T7N2 865 aaKnown RBP21.1■□□□□ 0.97
PABPC4-203ENST00000372858 TMEM132EQ6IEE7 984 aa21.1■□□□□ 0.97
PABPC4-203ENST00000372858 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
PABPC4-203ENST00000372858 TBC1D2Q9BYX2 928 aa21.1■□□□□ 0.97
PABPC4-203ENST00000372858 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
PABPC4-203ENST00000372858 PPRC1Q5VV67 1664 aaKnown RBP21.1■□□□□ 0.97
PABPC4-203ENST00000372858 RSPH6AQ9H0K4 717 aa21.07■□□□□ 0.96
PABPC4-203ENST00000372858 ADGRB3O60242 1522 aa21.07■□□□□ 0.96
PABPC4-203ENST00000372858 SHPRHQ149N8 1683 aa21.06■□□□□ 0.96
PABPC4-203ENST00000372858 GGT6Q6P531 493 aa21.06■□□□□ 0.96
PABPC4-203ENST00000372858 LMTK2Q8IWU2 1503 aa21.06■□□□□ 0.96
PABPC4-203ENST00000372858 CCDC27Q2M243 656 aa21.06■□□□□ 0.96
PABPC4-203ENST00000372858 MYH16Q9H6N6 1097 aa21.06■□□□□ 0.96
PABPC4-203ENST00000372858 KIDINS220Q9ULH0 1771 aa21.05■□□□□ 0.96
PABPC4-203ENST00000372858 CFAP65Q6ZU64 1925 aaKnown RBP21.04■□□□□ 0.96
PABPC4-203ENST00000372858 U2AF1L5P0DN76 240 aaPredicted RBP21.04■□□□□ 0.96
PABPC4-203ENST00000372858 U2AF1Q01081 240 aaKnown RBP eCLIP21.04■□□□□ 0.965e-6■□□□□ 8
PABPC4-203ENST00000372858 QRICH2Q9H0J4 1663 aa21.04■□□□□ 0.96
PABPC4-203ENST00000372858 RPGRIP1LQ68CZ1 1315 aa21.04■□□□□ 0.96
PABPC4-203ENST00000372858 IQSEC2Q5JU85 1478 aa21.03■□□□□ 0.96
PABPC4-203ENST00000372858 ZNF518AQ6AHZ1 1483 aa21.03■□□□□ 0.96
PABPC4-203ENST00000372858 MVPQ14764 893 aaKnown RBP21.02■□□□□ 0.96
PABPC4-203ENST00000372858 ASXL2Q76L83 1435 aa21.02■□□□□ 0.96
PABPC4-203ENST00000372858 EVC2Q86UK5 1308 aa21.02■□□□□ 0.96
PABPC4-203ENST00000372858 NPATQ14207 1427 aa21.02■□□□□ 0.96
PABPC4-203ENST00000372858 ZKSCAN2Q63HK3 967 aa21.01■□□□□ 0.95
PABPC4-203ENST00000372858 FTSJ3Q8IY81 847 aaKnown RBP21.01■□□□□ 0.95
PABPC4-203ENST00000372858 SPRYD3Q8NCJ5 442 aa21.01■□□□□ 0.95
PABPC4-203ENST00000372858 ADGRB1O14514 1584 aa21■□□□□ 0.95
PABPC4-203ENST00000372858 DZIP1LQ8IYY4 767 aaKnown RBP20.99■□□□□ 0.95
PABPC4-203ENST00000372858 NCBP3Q53F19 620 aaKnown RBP20.99■□□□□ 0.95
PABPC4-203ENST00000372858 PUS7Q96PZ0 661 aaKnown RBP20.99■□□□□ 0.95
PABPC4-203ENST00000372858 PPLO60437 1756 aa20.99■□□□□ 0.95
PABPC4-203ENST00000372858 MCM4P33991 863 aa20.98■□□□□ 0.95
PABPC4-203ENST00000372858 ZC3H13Q5T200 1668 aaKnown RBP20.98■□□□□ 0.95
PABPC4-203ENST00000372858 C22orf23Q9BZE7 217 aa20.98■□□□□ 0.95
PABPC4-203ENST00000372858 NSD2O96028 1365 aa20.98■□□□□ 0.95
PABPC4-203ENST00000372858 ANKRD36BQ8N2N9 1353 aa20.97■□□□□ 0.95
PABPC4-203ENST00000372858 USP32Q8NFA0 1604 aa20.97■□□□□ 0.95
PABPC4-203ENST00000372858 VGFO15240 615 aaPredicted RBP20.97■□□□□ 0.95
PABPC4-203ENST00000372858 GOLGA6L3A6NEY3 463 aa20.97■□□□□ 0.95
PABPC4-203ENST00000372858 NUTM2DQ5VT03 806 aaPredicted RBP20.97■□□□□ 0.95
PABPC4-203ENST00000372858 MFAP1P55081 439 aaKnown RBP20.96■□□□□ 0.95
PABPC4-203ENST00000372858 RRAGDQ9NQL2 400 aaPredicted RBP20.96■□□□□ 0.95
PABPC4-203ENST00000372858 CHMP5Q9NZZ3 219 aa20.96■□□□□ 0.95
PABPC4-203ENST00000372858 ARXQ96QS3 562 aa20.95■□□□□ 0.94
PABPC4-203ENST00000372858 CT47B1P0C2W7 299 aaPredicted RBP20.95■□□□□ 0.94
PABPC4-203ENST00000372858 CABP2Q9NPB3 220 aa20.95■□□□□ 0.94
PABPC4-203ENST00000372858 NPM1P06748 294 aaKnown RBP eCLIP20.94■□□□□ 0.94
PABPC4-203ENST00000372858 XRCC6P12956 609 aaKnown RBP eCLIP20.93■□□□□ 0.941e-9■□□□□ 8
PABPC4-203ENST00000372858 U2SURPO15042 1029 aaKnown RBP20.93■□□□□ 0.94
PABPC4-203ENST00000372858 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
PABPC4-203ENST00000372858 GZF1Q9H116 711 aaPredicted RBP20.93■□□□□ 0.94
PABPC4-203ENST00000372858 SMC4Q9NTJ3 1288 aa20.93■□□□□ 0.94
PABPC4-203ENST00000372858 FSD2A1L4K1 749 aa20.92■□□□□ 0.94
PABPC4-203ENST00000372858 HDAC1Q13547 482 aaPredicted RBP20.92■□□□□ 0.94
PABPC4-203ENST00000372858 TSR2Q969E8 191 aaKnown RBP20.92■□□□□ 0.94
PABPC4-203ENST00000372858 DDX19BQ9UMR2 479 aa20.91■□□□□ 0.94
PABPC4-203ENST00000372858 GLI2P10070 1586 aa20.9■□□□□ 0.94
PABPC4-203ENST00000372858 TRIM27P14373 513 aa20.9■□□□□ 0.94
PABPC4-203ENST00000372858 EXOSC9Q06265 439 aaKnown RBP20.9■□□□□ 0.94
PABPC4-203ENST00000372858 ITPRIPQ8IWB1 547 aa20.9■□□□□ 0.94
PABPC4-203ENST00000372858 TRAK2O60296 914 aa20.89■□□□□ 0.93
PABPC4-203ENST00000372858 SRPK2P78362 688 aaKnown RBP20.89■□□□□ 0.93
PABPC4-203ENST00000372858 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.93
PABPC4-203ENST00000372858 MLH3Q9UHC1 1453 aa20.89■□□□□ 0.93
PABPC4-203ENST00000372858 TULP4Q9NRJ4 1543 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms