RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 DZIP1LQ8IYY4 767 aaKnown RBP15.11■□□□□ 0.01
SNX21-205ENST00000372547 SMC4Q9NTJ3 1288 aa15.11■□□□□ 0.01
SNX21-205ENST00000372547 ERBB4Q15303 1308 aa15.1■□□□□ 0.01
SNX21-205ENST00000372547 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
SNX21-205ENST00000372547 U2AF1L5P0DN76 240 aaPredicted RBP15.1■□□□□ 0.01
SNX21-205ENST00000372547 CHGAP10645 457 aaKnown RBP15.1■□□□□ 0.01
SNX21-205ENST00000372547 MTHFSP49914 203 aa15.1■□□□□ 0.01
SNX21-205ENST00000372547 U2AF1Q01081 240 aaKnown RBP eCLIP15.1■□□□□ 0.01
SNX21-205ENST00000372547 ZKSCAN2Q63HK3 967 aa15.1■□□□□ 0.01
SNX21-205ENST00000372547 NGEFQ8N5V2 710 aa15.1■□□□□ 0.01
SNX21-205ENST00000372547 ZMYND15Q9H091 742 aa15.1■□□□□ 0.01
SNX21-205ENST00000372547 SLC12A5Q9H2X9 1139 aa15.1■□□□□ 0.01
SNX21-205ENST00000372547 RNF17Q9BXT8 1623 aaKnown RBP15.1■□□□□ 0.01
SNX21-205ENST00000372547 DDX11L8A8MPP1 907 aa15.09■□□□□ 0.01
SNX21-205ENST00000372547 IQGAP3Q86VI3 1631 aa15.09■□□□□ 0.01
SNX21-205ENST00000372547 NPC1L1Q9UHC9 1359 aa15.09■□□□□ 0.01
SNX21-205ENST00000372547 SENP3Q9H4L4 574 aaPredicted RBP15.08■□□□□ 0.01
SNX21-205ENST00000372547 MADDQ8WXG6 1647 aa15.08■□□□□ 0
SNX21-205ENST00000372547 TRAK1Q9UPV9 953 aa15.07■□□□□ 0
SNX21-205ENST00000372547 PREX2Q70Z35 1606 aa15.07■□□□□ 0
SNX21-205ENST00000372547 GAS2L3Q86XJ1 694 aa15.07■□□□□ 0
SNX21-205ENST00000372547 TNPO1Q92973 898 aaKnown RBP15.07■□□□□ 0
SNX21-205ENST00000372547 IQGAP1P46940 1657 aa15.07■□□□□ 0
SNX21-205ENST00000372547 ADGRF5Q8IZF2 1346 aa15.07■□□□□ 0
SNX21-205ENST00000372547 MYOM1P52179 1685 aa15.07■□□□□ 0
SNX21-205ENST00000372547 LNPKQ9C0E8 428 aa15.07■□□□□ 0
SNX21-205ENST00000372547 EFCAB2Q5VUJ9 269 aa15.06■□□□□ 0
SNX21-205ENST00000372547 MAST1Q9Y2H9 1570 aa15.06■□□□□ 0
SNX21-205ENST00000372547 NSD3Q9BZ95 1437 aa15.06■□□□□ 0
SNX21-205ENST00000372547 EXOSC9Q06265 439 aaKnown RBP15.06■□□□□ 0
SNX21-205ENST00000372547 WDR63Q8IWG1 891 aa15.06■□□□□ 0
SNX21-205ENST00000372547 POLR3AO14802 1390 aaPredicted RBP15.05■□□□□ 0
SNX21-205ENST00000372547 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ 0
SNX21-205ENST00000372547 KDM5AP29375 1690 aaKnown RBP15.05■□□□□ -0
SNX21-205ENST00000372547 AAMPQ13685 434 aa15.05■□□□□ -0
SNX21-205ENST00000372547 CFAP53Q96M91 514 aa15.05■□□□□ -0
SNX21-205ENST00000372547 RRP9O43818 475 aaKnown RBP15.04■□□□□ -0
SNX21-205ENST00000372547 TRIM27P14373 513 aa15.04■□□□□ -0
SNX21-205ENST00000372547 ATP10AO60312 1499 aa15.04■□□□□ -0
SNX21-205ENST00000372547 ERVK-7P63135 1459 aa15.04■□□□□ -0
SNX21-205ENST00000372547 DUOX2Q9NRD8 1548 aa15.04■□□□□ -0
SNX21-205ENST00000372547 TRAPPC8Q9Y2L5 1435 aa15.03■□□□□ -0
SNX21-205ENST00000372547 GBP4Q96PP9 640 aa15.02■□□□□ -0
SNX21-205ENST00000372547 ZNF692Q9BU19 519 aaPredicted RBP15.02■□□□□ -0
SNX21-205ENST00000372547 SSH1Q8WYL5 1049 aa15.02□□□□□ -0.01
SNX21-205ENST00000372547 NOB1Q9ULX3 412 aaKnown RBP15.02□□□□□ -0.01
SNX21-205ENST00000372547 PLXNC1O60486 1568 aa15.02□□□□□ -0.01
SNX21-205ENST00000372547 RTEL1-TNFRSF6BF6WH68 1400 aa15.02□□□□□ -0.01
SNX21-205ENST00000372547 SPAG9O60271 1321 aaKnown RBP15.01□□□□□ -0.01
SNX21-205ENST00000372547 TMEM57Q8N5G2 664 aa15.01□□□□□ -0.01
SNX21-205ENST00000372547 SHROOM2Q13796 1616 aa15.01□□□□□ -0.01
SNX21-205ENST00000372547 KIF3BO15066 747 aa15.01□□□□□ -0.01
SNX21-205ENST00000372547 TMEM132EQ6IEE7 984 aa15.01□□□□□ -0.01
SNX21-205ENST00000372547 DDX19BQ9UMR2 479 aa15.01□□□□□ -0.01
SNX21-205ENST00000372547 SCAPERQ9BY12 1400 aa15.01□□□□□ -0.01
SNX21-205ENST00000372547 NCLP19338 710 aaKnown RBP15□□□□□ -0.01
SNX21-205ENST00000372547 RBM42Q9BTD8 480 aaKnown RBP15□□□□□ -0.01
SNX21-205ENST00000372547 CEP152O94986 1710 aa15□□□□□ -0.01
SNX21-205ENST00000372547 CD2BP2O95400 341 aaKnown RBP14.99□□□□□ -0.01
SNX21-205ENST00000372547 PLCH2O75038 1416 aa14.99□□□□□ -0.01
SNX21-205ENST00000372547 SAFB2Q14151 953 aaKnown RBP eCLIP14.99□□□□□ -0.01
SNX21-205ENST00000372547 ATF7IPQ6VMQ6 1270 aa14.99□□□□□ -0.01
SNX21-205ENST00000372547 PHF23Q9BUL5 403 aaPredicted RBP14.98□□□□□ -0.01
SNX21-205ENST00000372547 SSFA2P28290 1259 aa14.97□□□□□ -0.01
SNX21-205ENST00000372547 ANKRD45Q5TZF3 282 aa14.97□□□□□ -0.01
SNX21-205ENST00000372547 KIAA1211Q6ZU35 1233 aa14.97□□□□□ -0.01
SNX21-205ENST00000372547 ANP32BQ92688 251 aaKnown RBP14.97□□□□□ -0.01
SNX21-205ENST00000372547 C1orf115Q9H7X2 142 aa14.97□□□□□ -0.01
SNX21-205ENST00000372547 CLTCL1P53675 1640 aa14.97□□□□□ -0.01
SNX21-205ENST00000372547 ZCCHC11Q5TAX3 1644 aaKnown RBP14.97□□□□□ -0.01
SNX21-205ENST00000372547 ZMYM3Q14202 1370 aa14.97□□□□□ -0.01
SNX21-205ENST00000372547 HDAC1Q13547 482 aaPredicted RBP14.97□□□□□ -0.01
SNX21-205ENST00000372547 NUTM2DQ5VT03 806 aaPredicted RBP14.97□□□□□ -0.01
SNX21-205ENST00000372547 SLC24A1O60721 1099 aa14.96□□□□□ -0.01
SNX21-205ENST00000372547 DDX49Q9Y6V7 483 aaKnown RBP14.96□□□□□ -0.01
SNX21-205ENST00000372547 SPHKAPQ2M3C7 1700 aa14.96□□□□□ -0.01
SNX21-205ENST00000372547 NASPP49321 788 aaPredicted RBP14.96□□□□□ -0.01
SNX21-205ENST00000372547 RBM10P98175 930 aaKnown RBP14.96□□□□□ -0.01
SNX21-205ENST00000372547 UGGT1Q9NYU2 1555 aa14.96□□□□□ -0.01
SNX21-205ENST00000372547 STAC3Q96MF2 364 aa14.96□□□□□ -0.02
SNX21-205ENST00000372547 ARID3AQ99856 593 aa14.96□□□□□ -0.02
SNX21-205ENST00000372547 RAB3GAP1Q15042 981 aa14.95□□□□□ -0.02
SNX21-205ENST00000372547 SMC5Q8IY18 1101 aa14.95□□□□□ -0.02
SNX21-205ENST00000372547 CHD1LQ86WJ1 897 aa14.95□□□□□ -0.02
SNX21-205ENST00000372547 RBM25P49756 843 aaKnown RBP14.94□□□□□ -0.02
SNX21-205ENST00000372547 CCDC27Q2M243 656 aa14.94□□□□□ -0.02
SNX21-205ENST00000372547 IQSEC2Q5JU85 1478 aa14.94□□□□□ -0.02
SNX21-205ENST00000372547 GOLGA6L22H0YM25 854 aa14.94□□□□□ -0.02
SNX21-205ENST00000372547 MSNP26038 577 aaKnown RBP14.94□□□□□ -0.02
SNX21-205ENST00000372547 SKOR2Q2VWA4 1001 aaPredicted RBP14.94□□□□□ -0.02
SNX21-205ENST00000372547 TRPM2O94759 1503 aa14.94□□□□□ -0.02
SNX21-205ENST00000372547 KANK1Q14678 1352 aa14.93□□□□□ -0.02
SNX21-205ENST00000372547 DDIT3P35638 169 aa14.93□□□□□ -0.02
SNX21-205ENST00000372547 ISY1Q9ULR0 285 aaKnown RBP14.93□□□□□ -0.02
SNX21-205ENST00000372547 PTPRTO14522 1441 aa14.93□□□□□ -0.02
SNX21-205ENST00000372547 SHPRHQ149N8 1683 aa14.93□□□□□ -0.02
SNX21-205ENST00000372547 NUCB1Q02818 461 aa14.93□□□□□ -0.02
SNX21-205ENST00000372547 GAS2L2Q8NHY3 880 aa14.93□□□□□ -0.02
SNX21-205ENST00000372547 SNX21Q969T3 373 aa14.93□□□□□ -0.02
SNX21-205ENST00000372547 ZBTB40Q9NUA8 1239 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms