RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 KNSTRNQ9Y448 316 aa24.58■■□□□ 1.53
CD40-202ENST00000372285 DIP2AQ14689 1571 aa24.58■■□□□ 1.53
CD40-202ENST00000372285 NPC1L1Q9UHC9 1359 aa24.58■■□□□ 1.53
CD40-202ENST00000372285 CNGB1Q14028 1251 aaPredicted RBP24.58■■□□□ 1.52
CD40-202ENST00000372285 FAM135BQ49AJ0 1406 aa24.57■■□□□ 1.52
CD40-202ENST00000372285 MINK1Q8N4C8 1332 aaPredicted RBP24.55■■□□□ 1.52
CD40-202ENST00000372285 AMER1Q5JTC6 1135 aaPredicted RBP24.55■■□□□ 1.52
CD40-202ENST00000372285 BRD4O60885 1362 aaPredicted RBP24.54■■□□□ 1.52
CD40-202ENST00000372285 TBX22Q9Y458 520 aa24.53■■□□□ 1.52
CD40-202ENST00000372285 PLEKHH1Q9ULM0 1364 aa24.53■■□□□ 1.52
CD40-202ENST00000372285 WAPLQ7Z5K2 1190 aa24.52■■□□□ 1.52
CD40-202ENST00000372285 NINLQ9Y2I6 1382 aa24.52■■□□□ 1.52
CD40-202ENST00000372285 CC2D1BQ5T0F9 858 aaKnown RBP24.52■■□□□ 1.52
CD40-202ENST00000372285 CARD14Q9BXL6 1004 aa24.52■■□□□ 1.52
CD40-202ENST00000372285 SLC12A5Q9H2X9 1139 aa24.51■■□□□ 1.51
CD40-202ENST00000372285 CABP2Q9NPB3 220 aa24.51■■□□□ 1.51
CD40-202ENST00000372285 ATAD2Q6PL18 1390 aa24.51■■□□□ 1.51
CD40-202ENST00000372285 USP32Q8NFA0 1604 aa24.5■■□□□ 1.51
CD40-202ENST00000372285 TMC1Q8TDI8 760 aa24.49■■□□□ 1.51
CD40-202ENST00000372285 NLRP13Q86W25 1043 aa24.49■■□□□ 1.51
CD40-202ENST00000372285 SRPK2P78362 688 aaKnown RBP24.48■■□□□ 1.51
CD40-202ENST00000372285 SLC26A8Q96RN1 970 aa24.48■■□□□ 1.51
CD40-202ENST00000372285 PTPRUQ92729 1446 aa24.48■■□□□ 1.51
CD40-202ENST00000372285 CDK19Q9BWU1 502 aa24.47■■□□□ 1.51
CD40-202ENST00000372285 ANKRD36BQ8N2N9 1353 aa24.47■■□□□ 1.51
CD40-202ENST00000372285 ROBO2Q9HCK4 1378 aa24.46■■□□□ 1.51
CD40-202ENST00000372285 ANKLE2Q86XL3 938 aa24.45■■□□□ 1.5
CD40-202ENST00000372285 XRN1Q8IZH2 1706 aaKnown RBP24.44■■□□□ 1.5
CD40-202ENST00000372285 ADGRB2O60241 1585 aa24.44■■□□□ 1.5
CD40-202ENST00000372285 NSD3Q9BZ95 1437 aa24.44■■□□□ 1.5
CD40-202ENST00000372285 FAM9BQ8IZU0 186 aa24.44■■□□□ 1.5
CD40-202ENST00000372285 PNISRQ8TF01 805 aaKnown RBP24.43■■□□□ 1.5
CD40-202ENST00000372285 PIK3R4Q99570 1358 aa24.43■■□□□ 1.5
CD40-202ENST00000372285 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.42■■□□□ 1.5
CD40-202ENST00000372285 PTCH1Q13635 1447 aa24.41■■□□□ 1.5
CD40-202ENST00000372285 WASLO00401 505 aaPredicted RBP24.41■■□□□ 1.5
CD40-202ENST00000372285 AMOTL2Q9Y2J4 779 aa24.39■■□□□ 1.5
CD40-202ENST00000372285 CD163L1Q9NR16 1453 aa24.39■■□□□ 1.49
CD40-202ENST00000372285 CHD2O14647 1828 aaKnown RBP24.38■■□□□ 1.49
CD40-202ENST00000372285 PPP2R1AP30153 589 aa24.38■■□□□ 1.49
CD40-202ENST00000372285 HNRNPUQ00839 825 aaKnown RBP eCLIP24.38■■□□□ 1.49
CD40-202ENST00000372285 A0A1W2PP64 1363 aa24.37■■□□□ 1.49
CD40-202ENST00000372285 TERF2IPQ9NYB0 399 aa24.36■■□□□ 1.49
CD40-202ENST00000372285 ATP7BP35670 1465 aa24.36■■□□□ 1.49
CD40-202ENST00000372285 CGNL1Q0VF96 1302 aa24.35■■□□□ 1.49
CD40-202ENST00000372285 NSD2O96028 1365 aa24.34■■□□□ 1.49
CD40-202ENST00000372285 CABP1Q9NZU7 370 aa24.32■■□□□ 1.48
CD40-202ENST00000372285 NPHP4O75161 1426 aaPredicted RBP24.32■■□□□ 1.48
CD40-202ENST00000372285 ANKRD26Q9UPS8 1709 aa24.32■■□□□ 1.48
CD40-202ENST00000372285 HDGFL2Q7Z4V5 671 aaPredicted RBP24.31■■□□□ 1.48
CD40-202ENST00000372285 NUDT16Q96DE0 195 aaKnown RBP24.3■■□□□ 1.48
CD40-202ENST00000372285 TOPAZ1Q8N9V7 1692 aa24.29■■□□□ 1.48
CD40-202ENST00000372285 PPIP5K1Q6PFW1 1433 aa24.28■■□□□ 1.48
CD40-202ENST00000372285 INSRP06213 1382 aa24.28■■□□□ 1.48
CD40-202ENST00000372285 CDC42BPGQ6DT37 1551 aa24.28■■□□□ 1.48
CD40-202ENST00000372285 KIF20BQ96Q89 1820 aa24.28■■□□□ 1.48
CD40-202ENST00000372285 AKAP12Q02952 1782 aa24.28■■□□□ 1.48
CD40-202ENST00000372285 MORC1Q86VD1 984 aa24.27■■□□□ 1.48
CD40-202ENST00000372285 CPSF1Q10570 1443 aaKnown RBP24.27■■□□□ 1.48
CD40-202ENST00000372285 ITSN1Q15811 1721 aa24.27■■□□□ 1.48
CD40-202ENST00000372285 CCDC61Q9Y6R9 512 aa24.27■■□□□ 1.48
CD40-202ENST00000372285 ZBED9Q6R2W3 1325 aa24.26■■□□□ 1.47
CD40-202ENST00000372285 KCNA6P17658 529 aa24.26■■□□□ 1.47
CD40-202ENST00000372285 MON2Q7Z3U7 1717 aa24.26■■□□□ 1.47
CD40-202ENST00000372285 PRR36Q9H6K5 1346 aa24.25■■□□□ 1.47
CD40-202ENST00000372285 NCKAP5LQ9HCH0 1330 aa24.22■■□□□ 1.47
CD40-202ENST00000372285 KDM4FA0A1W2PPD8 638 aa24.21■■□□□ 1.47
CD40-202ENST00000372285 EDC4Q6P2E9 1401 aaKnown RBP24.2■■□□□ 1.47
CD40-202ENST00000372285 NWD1Q149M9 1564 aa24.2■■□□□ 1.47
CD40-202ENST00000372285 FYB1O15117 783 aa24.2■■□□□ 1.46
CD40-202ENST00000372285 POLR3AO14802 1390 aaPredicted RBP24.19■■□□□ 1.46
CD40-202ENST00000372285 FMN2Q9NZ56 1722 aa24.19■■□□□ 1.46
CD40-202ENST00000372285 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
CD40-202ENST00000372285 NALCNQ8IZF0 1738 aa24.19■■□□□ 1.46
CD40-202ENST00000372285 BLMP54132 1417 aaPredicted RBP24.18■■□□□ 1.46
CD40-202ENST00000372285 RGPD8O14715 1765 aaPredicted RBP24.18■■□□□ 1.46
CD40-202ENST00000372285 PLEKHG3A1L390 1219 aa24.17■■□□□ 1.46
CD40-202ENST00000372285 ZNF692Q9BU19 519 aaPredicted RBP24.17■■□□□ 1.46
CD40-202ENST00000372285 GTF3C3Q9Y5Q9 886 aa24.17■■□□□ 1.46
CD40-202ENST00000372285 ANKARQ7Z5J8 1434 aa24.15■■□□□ 1.46
CD40-202ENST00000372285 GGNBP2Q9H3C7 697 aa24.15■■□□□ 1.46
CD40-202ENST00000372285 NKTRP30414 1462 aaKnown RBP24.14■■□□□ 1.45
CD40-202ENST00000372285 NRKQ7Z2Y5 1582 aa24.14■■□□□ 1.45
CD40-202ENST00000372285 TNNT2P45379 298 aaPredicted RBP24.13■■□□□ 1.45
CD40-202ENST00000372285 WDR43Q15061 677 aaKnown RBP eCLIP24.13■■□□□ 1.45
CD40-202ENST00000372285 SHPRHQ149N8 1683 aa24.13■■□□□ 1.45
CD40-202ENST00000372285 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
CD40-202ENST00000372285 ADGRL3Q9HAR2 1447 aa24.1■■□□□ 1.45
CD40-202ENST00000372285 ACEP12821 1306 aa24.1■■□□□ 1.45
CD40-202ENST00000372285 MTHFSP49914 203 aa24.1■■□□□ 1.45
CD40-202ENST00000372285 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.1■■□□□ 1.45
CD40-202ENST00000372285 NUTM2FA1L443 756 aa24.09■■□□□ 1.45
CD40-202ENST00000372285 LMTK3Q96Q04 1460 aa24.09■■□□□ 1.45
CD40-202ENST00000372285 CFAP53Q96M91 514 aa24.07■■□□□ 1.44
CD40-202ENST00000372285 USP6P35125 1406 aa24.07■■□□□ 1.44
CD40-202ENST00000372285 MAP2P11137 1827 aaKnown RBP24.04■■□□□ 1.44
CD40-202ENST00000372285 SSH2Q76I76 1423 aa24.04■■□□□ 1.44
CD40-202ENST00000372285 NME9Q86XW9 330 aa24.04■■□□□ 1.44
CD40-202ENST00000372285 STRCQ7RTU9 1775 aa24.03■■□□□ 1.44
CD40-202ENST00000372285 HSPA2P54652 639 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms