RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 PRAG1Q86YV5 1406 aa11.75□□□□□ -0.53
HMGCLL1-204ENST00000370852 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
HMGCLL1-204ENST00000370852 ABCA10Q8WWZ4 1543 aa11.75□□□□□ -0.53
HMGCLL1-204ENST00000370852 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
HMGCLL1-204ENST00000370852 FAM135AQ9P2D6 1515 aa11.74□□□□□ -0.53
HMGCLL1-204ENST00000370852 CUL7Q14999 1698 aa11.74□□□□□ -0.53
HMGCLL1-204ENST00000370852 ARHGEF12Q9NZN5 1544 aa11.74□□□□□ -0.53
HMGCLL1-204ENST00000370852 PRDM2Q13029 1718 aa11.73□□□□□ -0.53
HMGCLL1-204ENST00000370852 TMF1P82094 1093 aa11.73□□□□□ -0.53
HMGCLL1-204ENST00000370852 SNX21Q969T3 373 aa11.73□□□□□ -0.53
HMGCLL1-204ENST00000370852 CC2D2AQ9P2K1 1620 aa11.73□□□□□ -0.53
HMGCLL1-204ENST00000370852 KDM5DQ9BY66 1539 aa11.73□□□□□ -0.53
HMGCLL1-204ENST00000370852 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
HMGCLL1-204ENST00000370852 RBM25P49756 843 aaKnown RBP11.72□□□□□ -0.53
HMGCLL1-204ENST00000370852 GPT2Q8TD30 523 aa11.72□□□□□ -0.53
HMGCLL1-204ENST00000370852 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
HMGCLL1-204ENST00000370852 ZNF445P59923 1031 aa11.72□□□□□ -0.53
HMGCLL1-204ENST00000370852 LMBRD1Q9NUN5 540 aa11.72□□□□□ -0.53
HMGCLL1-204ENST00000370852 CFDP1Q9UEE9 299 aaPredicted RBP11.72□□□□□ -0.53
HMGCLL1-204ENST00000370852 CLASP1Q7Z460 1538 aa11.72□□□□□ -0.53
HMGCLL1-204ENST00000370852 ANKRD50Q9ULJ7 1429 aa11.72□□□□□ -0.53
HMGCLL1-204ENST00000370852 WDR7Q9Y4E6 1490 aa11.72□□□□□ -0.53
HMGCLL1-204ENST00000370852 MTERF4Q7Z6M4 381 aaKnown RBP11.71□□□□□ -0.53
HMGCLL1-204ENST00000370852 CIZ1Q9ULV3 898 aaPredicted RBP11.71□□□□□ -0.53
HMGCLL1-204ENST00000370852 DNTTIP2Q5QJE6 756 aaKnown RBP11.71□□□□□ -0.54
HMGCLL1-204ENST00000370852 CGNQ9P2M7 1197 aaKnown RBP11.71□□□□□ -0.54
HMGCLL1-204ENST00000370852 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.71□□□□□ -0.54
HMGCLL1-204ENST00000370852 SYCE3A1L190 88 aa11.7□□□□□ -0.54
HMGCLL1-204ENST00000370852 PRPF40AO75400 957 aaKnown RBP11.7□□□□□ -0.54
HMGCLL1-204ENST00000370852 HS1BP3Q53T59 392 aa11.7□□□□□ -0.54
HMGCLL1-204ENST00000370852 FOXD4L5Q5VV16 416 aaPredicted RBP11.7□□□□□ -0.54
HMGCLL1-204ENST00000370852 MYRIPQ8NFW9 859 aa11.7□□□□□ -0.54
HMGCLL1-204ENST00000370852 FOXD4L4Q8WXT5 416 aaPredicted RBP11.7□□□□□ -0.54
HMGCLL1-204ENST00000370852 LNPKQ9C0E8 428 aa11.7□□□□□ -0.54
HMGCLL1-204ENST00000370852 K7ELQ4 463 aaPredicted RBP11.69□□□□□ -0.54
HMGCLL1-204ENST00000370852 TMEM63CQ9P1W3 806 aa11.69□□□□□ -0.54
HMGCLL1-204ENST00000370852 U2AF2P26368 475 aaKnown RBP eCLIP11.69□□□□□ -0.54
HMGCLL1-204ENST00000370852 MVPQ14764 893 aaKnown RBP11.69□□□□□ -0.54
HMGCLL1-204ENST00000370852 CSPP1Q1MSJ5 1256 aa11.69□□□□□ -0.54
HMGCLL1-204ENST00000370852 GTPBP4Q9BZE4 634 aaKnown RBP11.68□□□□□ -0.54
HMGCLL1-204ENST00000370852 TNNT2P45379 298 aaPredicted RBP11.68□□□□□ -0.54
HMGCLL1-204ENST00000370852 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
HMGCLL1-204ENST00000370852 PRG4Q92954 1404 aaPredicted RBP11.68□□□□□ -0.54
HMGCLL1-204ENST00000370852 WDR62O43379 1518 aa11.68□□□□□ -0.54
HMGCLL1-204ENST00000370852 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
HMGCLL1-204ENST00000370852 ZMYM3Q14202 1370 aa11.67□□□□□ -0.54
HMGCLL1-204ENST00000370852 IBTKQ9P2D0 1353 aaPredicted RBP11.67□□□□□ -0.54
HMGCLL1-204ENST00000370852 KIF20AO95235 890 aa11.67□□□□□ -0.54
HMGCLL1-204ENST00000370852 IPO4Q8TEX9 1081 aaKnown RBP11.67□□□□□ -0.54
HMGCLL1-204ENST00000370852 FANCD2Q9BXW9 1451 aa11.67□□□□□ -0.54
HMGCLL1-204ENST00000370852 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
HMGCLL1-204ENST00000370852 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
HMGCLL1-204ENST00000370852 PRDM15P57071 1507 aaPredicted RBP11.66□□□□□ -0.54
HMGCLL1-204ENST00000370852 A2MP01023 1474 aa11.66□□□□□ -0.54
HMGCLL1-204ENST00000370852 LETM1O95202 739 aaPredicted RBP11.66□□□□□ -0.54
HMGCLL1-204ENST00000370852 PTMAP06454 111 aaKnown RBP11.66□□□□□ -0.54
HMGCLL1-204ENST00000370852 ZGPATQ8N5A5 531 aaKnown RBP11.66□□□□□ -0.54
HMGCLL1-204ENST00000370852 CCDC39Q9UFE4 941 aa11.66□□□□□ -0.54
HMGCLL1-204ENST00000370852 LAMC3Q9Y6N6 1575 aa11.65□□□□□ -0.54
HMGCLL1-204ENST00000370852 ANKRD30AQ9BXX3 1397 aa11.65□□□□□ -0.54
HMGCLL1-204ENST00000370852 NINLQ9Y2I6 1382 aa11.65□□□□□ -0.54
HMGCLL1-204ENST00000370852 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.54
HMGCLL1-204ENST00000370852 TTC12Q9H892 705 aaPredicted RBP11.65□□□□□ -0.54
HMGCLL1-204ENST00000370852 ADGBQ8N7X0 1667 aa11.65□□□□□ -0.54
HMGCLL1-204ENST00000370852 GPRASP1Q5JY77 1395 aa11.65□□□□□ -0.54
HMGCLL1-204ENST00000370852 ITPRIPQ8IWB1 547 aa11.65□□□□□ -0.55
HMGCLL1-204ENST00000370852 FTSJ3Q8IY81 847 aaKnown RBP11.65□□□□□ -0.55
HMGCLL1-204ENST00000370852 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
HMGCLL1-204ENST00000370852 KIAA2012Q0VF49 1180 aa11.64□□□□□ -0.55
HMGCLL1-204ENST00000370852 CLEC17AQ6ZS10 378 aa11.64□□□□□ -0.55
HMGCLL1-204ENST00000370852 DZIP1LQ8IYY4 767 aaKnown RBP11.64□□□□□ -0.55
HMGCLL1-204ENST00000370852 ZDHHC9Q9Y397 364 aa11.64□□□□□ -0.55
HMGCLL1-204ENST00000370852 TPRNQ4KMQ1 711 aa11.64□□□□□ -0.55
HMGCLL1-204ENST00000370852 TBC1D9Q6ZT07 1266 aa11.64□□□□□ -0.55
HMGCLL1-204ENST00000370852 TCP11L2Q8N4U5 519 aa11.64□□□□□ -0.55
HMGCLL1-204ENST00000370852 PIK3C2GO75747 1445 aa11.63□□□□□ -0.55
HMGCLL1-204ENST00000370852 PTMSP20962 102 aa11.63□□□□□ -0.55
HMGCLL1-204ENST00000370852 LRSAM1Q6UWE0 723 aa11.63□□□□□ -0.55
HMGCLL1-204ENST00000370852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.63□□□□□ -0.55
HMGCLL1-204ENST00000370852 TRIM27P14373 513 aa11.62□□□□□ -0.55
HMGCLL1-204ENST00000370852 EIF4G3O43432 1585 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-204ENST00000370852 PLXNC1O60486 1568 aa11.62□□□□□ -0.55
HMGCLL1-204ENST00000370852 NOLC1Q14978 699 aaKnown RBP eCLIP11.62□□□□□ -0.55
HMGCLL1-204ENST00000370852 ZNF771Q7L3S4 317 aaPredicted RBP11.62□□□□□ -0.55
HMGCLL1-204ENST00000370852 CARD14Q9BXL6 1004 aa11.62□□□□□ -0.55
HMGCLL1-204ENST00000370852 SCAPERQ9BY12 1400 aa11.62□□□□□ -0.55
HMGCLL1-204ENST00000370852 CHMP4AQ9BY43 222 aa11.62□□□□□ -0.55
HMGCLL1-204ENST00000370852 ADCY10Q96PN6 1610 aa11.62□□□□□ -0.55
HMGCLL1-204ENST00000370852 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
HMGCLL1-204ENST00000370852 MCM5P33992 734 aa11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 FOXD4L6Q3SYB3 417 aaPredicted RBP11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 FOXD4L3Q6VB84 417 aaPredicted RBP11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 CERS3Q8IU89 383 aa11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 PDCL2Q8N4E4 241 aa11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 ASXL1Q8IXJ9 1541 aa11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 ADGRL2O95490 1459 aa11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 CYP2E1P05181 493 aaPredicted RBP11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 IRX5P78411 483 aaPredicted RBP11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 ZKSCAN2Q63HK3 967 aa11.61□□□□□ -0.55
HMGCLL1-204ENST00000370852 PLA2R1Q13018 1463 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms