RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 VPS37DQ86XT2 251 aa23.98■■□□□ 1.43
LMO4-202ENST00000370544 PRAM1Q96QH2 718 aa23.98■■□□□ 1.43
LMO4-202ENST00000370544 ERC2O15083 957 aa23.98■■□□□ 1.43
LMO4-202ENST00000370544 CC2D2AQ9P2K1 1620 aa23.98■■□□□ 1.43
LMO4-202ENST00000370544 GOLGA6L19H0YKK7 550 aa23.97■■□□□ 1.43
LMO4-202ENST00000370544 TRIM29Q14134 588 aa23.97■■□□□ 1.43
LMO4-202ENST00000370544 SCAPERQ9BY12 1400 aa23.97■■□□□ 1.43
LMO4-202ENST00000370544 TPM3P06753 285 aa23.97■■□□□ 1.43
LMO4-202ENST00000370544 AIMP1Q12904 312 aaKnown RBP23.97■■□□□ 1.43
LMO4-202ENST00000370544 FANCIQ9NVI1 1328 aa23.97■■□□□ 1.43
LMO4-202ENST00000370544 TXNDC2Q86VQ3 553 aa23.97■■□□□ 1.43
LMO4-202ENST00000370544 GPRASP1Q5JY77 1395 aa23.96■■□□□ 1.43
LMO4-202ENST00000370544 MEX3CQ5U5Q3 659 aaKnown RBP23.96■■□□□ 1.43
LMO4-202ENST00000370544 CPLX1O14810 134 aa23.96■■□□□ 1.43
LMO4-202ENST00000370544 BECN2A8MW95 431 aa23.96■■□□□ 1.43
LMO4-202ENST00000370544 PES1O00541 588 aaKnown RBP23.96■■□□□ 1.43
LMO4-202ENST00000370544 UBTFL1P0CB47 393 aaPredicted RBP23.96■■□□□ 1.43
LMO4-202ENST00000370544 GSE1Q14687 1217 aa23.96■■□□□ 1.43
LMO4-202ENST00000370544 TIAM1Q13009 1591 aa23.95■■□□□ 1.43
LMO4-202ENST00000370544 TRDNQ13061 729 aa23.95■■□□□ 1.42
LMO4-202ENST00000370544 ABTB2Q8N961 1025 aa23.94■■□□□ 1.42
LMO4-202ENST00000370544 CHMP5Q9NZZ3 219 aa23.94■■□□□ 1.42
LMO4-202ENST00000370544 GAS2L2Q8NHY3 880 aa23.94■■□□□ 1.42
LMO4-202ENST00000370544 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
LMO4-202ENST00000370544 CDCA7LQ96GN5 454 aa23.93■■□□□ 1.42
LMO4-202ENST00000370544 TRIM34Q9BYJ4 488 aa23.93■■□□□ 1.42
LMO4-202ENST00000370544 DAPK1P53355 1430 aa23.92■■□□□ 1.42
LMO4-202ENST00000370544 C22orf23Q9BZE7 217 aa23.91■■□□□ 1.42
LMO4-202ENST00000370544 NBPF8Q3BBV2 869 aa23.91■■□□□ 1.42
LMO4-202ENST00000370544 ESCO1Q5FWF5 840 aa23.91■■□□□ 1.42
LMO4-202ENST00000370544 CCDC30Q5VVM6 783 aa23.9■■□□□ 1.42
LMO4-202ENST00000370544 CDC45O75419 566 aa23.9■■□□□ 1.42
LMO4-202ENST00000370544 RAD21O60216 631 aa23.9■■□□□ 1.42
LMO4-202ENST00000370544 NEUROD6Q96NK8 337 aa23.89■■□□□ 1.42
LMO4-202ENST00000370544 DNMBPQ6XZF7 1577 aa23.89■■□□□ 1.41
LMO4-202ENST00000370544 SUPT6HQ7KZ85 1726 aaKnown RBP23.89■■□□□ 1.41
LMO4-202ENST00000370544 NFXL1Q6ZNB6 911 aa23.89■■□□□ 1.41
LMO4-202ENST00000370544 SMC3Q9UQE7 1217 aa23.88■■□□□ 1.41
LMO4-202ENST00000370544 EXOSC9Q06265 439 aaKnown RBP23.88■■□□□ 1.41
LMO4-202ENST00000370544 TSR1Q2NL82 804 aaKnown RBP23.88■■□□□ 1.41
LMO4-202ENST00000370544 CDK19Q9BWU1 502 aa23.88■■□□□ 1.41
LMO4-202ENST00000370544 SLC12A5Q9H2X9 1139 aa23.88■■□□□ 1.41
LMO4-202ENST00000370544 TPM2P07951 284 aa23.87■■□□□ 1.41
LMO4-202ENST00000370544 ERICH2A1L162 156 aa23.86■■□□□ 1.41
LMO4-202ENST00000370544 VPS37CA5D8V6 355 aaPredicted RBP23.86■■□□□ 1.41
LMO4-202ENST00000370544 PLEKHO1Q53GL0 409 aaPredicted RBP23.86■■□□□ 1.41
LMO4-202ENST00000370544 GNAI3P08754 354 aa23.86■■□□□ 1.41
LMO4-202ENST00000370544 FBXW7Q969H0 707 aa23.86■■□□□ 1.41
LMO4-202ENST00000370544 CEP89Q96ST8 783 aa23.86■■□□□ 1.41
LMO4-202ENST00000370544 GOLGA6L1Q8N7Z2 621 aa23.85■■□□□ 1.41
LMO4-202ENST00000370544 BICD2Q8TD16 824 aa23.85■■□□□ 1.41
LMO4-202ENST00000370544 PDE4CQ08493 712 aa23.85■■□□□ 1.41
LMO4-202ENST00000370544 NINLQ9Y2I6 1382 aa23.85■■□□□ 1.41
LMO4-202ENST00000370544 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
LMO4-202ENST00000370544 NUCB2P80303 420 aa23.85■■□□□ 1.41
LMO4-202ENST00000370544 SLC52A1Q9NWF4 448 aa23.85■■□□□ 1.41
LMO4-202ENST00000370544 TPM1P09493 284 aa23.85■■□□□ 1.41
LMO4-202ENST00000370544 TWISTNBQ3B726 338 aaPredicted RBP23.84■■□□□ 1.41
LMO4-202ENST00000370544 ERBINQ96RT1 1412 aa23.84■■□□□ 1.41
LMO4-202ENST00000370544 DHX16O60231 1041 aaKnown RBP23.84■■□□□ 1.41
LMO4-202ENST00000370544 CABP1Q9NZU7 370 aa23.84■■□□□ 1.41
LMO4-202ENST00000370544 PROSER2Q86WR7 435 aaPredicted RBP23.83■■□□□ 1.41
LMO4-202ENST00000370544 WASHC4Q2M389 1173 aa23.82■■□□□ 1.4
LMO4-202ENST00000370544 A0A0U1RQG5 324 aaPredicted RBP23.82■■□□□ 1.4
LMO4-202ENST00000370544 RBM33Q96EV2 1170 aaKnown RBP23.82■■□□□ 1.4
LMO4-202ENST00000370544 THEMISQ8N1K5 641 aaPredicted RBP23.82■■□□□ 1.4
LMO4-202ENST00000370544 CNTROBQ8N137 903 aa23.81■■□□□ 1.4
LMO4-202ENST00000370544 ZNF692Q9BU19 519 aaPredicted RBP23.81■■□□□ 1.4
LMO4-202ENST00000370544 RALYLQ86SE5 291 aaKnown RBP23.8■■□□□ 1.4
LMO4-202ENST00000370544 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.8■■□□□ 1.4
LMO4-202ENST00000370544 CTDP1Q9Y5B0 961 aaPredicted RBP23.8■■□□□ 1.4
LMO4-202ENST00000370544 SURF6O75683 361 aaKnown RBP23.79■■□□□ 1.4
LMO4-202ENST00000370544 CDK13Q14004 1512 aaKnown RBP23.79■■□□□ 1.4
LMO4-202ENST00000370544 CLASRPQ8N2M8 674 aaKnown RBP23.79■■□□□ 1.4
LMO4-202ENST00000370544 CCDC47Q96A33 483 aaKnown RBP23.79■■□□□ 1.4
LMO4-202ENST00000370544 TSR2Q969E8 191 aaKnown RBP23.79■■□□□ 1.4
LMO4-202ENST00000370544 TCEAL9Q9UHQ7 104 aa23.79■■□□□ 1.4
LMO4-202ENST00000370544 HOOK1Q9UJC3 728 aaKnown RBP23.79■■□□□ 1.4
LMO4-202ENST00000370544 RPGRIP1LQ68CZ1 1315 aa23.78■■□□□ 1.4
LMO4-202ENST00000370544 FSD1Q9BTV5 496 aa23.78■■□□□ 1.4
LMO4-202ENST00000370544 NOB1Q9ULX3 412 aaKnown RBP23.78■■□□□ 1.4
LMO4-202ENST00000370544 RTEL1-TNFRSF6BF6WH68 1400 aa23.78■■□□□ 1.4
LMO4-202ENST00000370544 EPRSP07814 1512 aaKnown RBP23.78■■□□□ 1.4
LMO4-202ENST00000370544 FOSBP53539 338 aa23.77■■□□□ 1.4
LMO4-202ENST00000370544 PDE3AQ14432 1141 aa23.77■■□□□ 1.4
LMO4-202ENST00000370544 SULT6B1Q6IMI4 303 aa23.77■■□□□ 1.4
LMO4-202ENST00000370544 RAPGEF3O95398 923 aa23.77■■□□□ 1.4
LMO4-202ENST00000370544 KIAA0586Q9BVV6 1533 aa23.77■■□□□ 1.4
LMO4-202ENST00000370544 PDZRN3Q9UPQ7 1066 aa23.76■■□□□ 1.39
LMO4-202ENST00000370544 C1orf115Q9H7X2 142 aa23.75■■□□□ 1.39
LMO4-202ENST00000370544 PSMA5P28066 241 aa23.75■■□□□ 1.39
LMO4-202ENST00000370544 SAFBQ15424 915 aaKnown RBP eCLIP23.75■■□□□ 1.39
LMO4-202ENST00000370544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.75■■□□□ 1.391e-6■■■■■ 32.9
LMO4-202ENST00000370544 ANKRD30BQ9BXX2 1392 aa23.75■■□□□ 1.39
LMO4-202ENST00000370544 TATP17735 454 aaPredicted RBP23.74■■□□□ 1.39
LMO4-202ENST00000370544 ANKRD20A12PQ8NF67 263 aa23.74■■□□□ 1.39
LMO4-202ENST00000370544 CCDC27Q2M243 656 aa23.74■■□□□ 1.39
LMO4-202ENST00000370544 GCC1Q96CN9 775 aa23.74■■□□□ 1.39
LMO4-202ENST00000370544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.74■■□□□ 1.39
LMO4-202ENST00000370544 GNAI2P04899 355 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms