RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 IQGAP1P46940 1657 aa14.1□□□□□ -0.15
GTF2B-201ENST00000370500 SEC24BO95487 1268 aa14.09□□□□□ -0.15
GTF2B-201ENST00000370500 POTEGQ6S5H5 508 aa14.08□□□□□ -0.16
GTF2B-201ENST00000370500 POTEFA5A3E0 1075 aa14.07□□□□□ -0.16
GTF2B-201ENST00000370500 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
GTF2B-201ENST00000370500 IER5LQ5T953 404 aa14.06□□□□□ -0.16
GTF2B-201ENST00000370500 FBXO3Q9UK99 471 aa14.06□□□□□ -0.16
GTF2B-201ENST00000370500 TMEM131LA2VDJ0 1609 aa14.06□□□□□ -0.16
GTF2B-201ENST00000370500 ZFYVE9O95405 1425 aa14.05□□□□□ -0.16
GTF2B-201ENST00000370500 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
GTF2B-201ENST00000370500 RIMS2Q9UQ26 1411 aa14.05□□□□□ -0.16
GTF2B-201ENST00000370500 PLEKHG1Q9ULL1 1385 aa14.04□□□□□ -0.16
GTF2B-201ENST00000370500 TRIM35Q9UPQ4 493 aa14.04□□□□□ -0.16
GTF2B-201ENST00000370500 SETD5Q9C0A6 1442 aa14.04□□□□□ -0.16
GTF2B-201ENST00000370500 KCNA6P17658 529 aa14.03□□□□□ -0.16
GTF2B-201ENST00000370500 BCANQ96GW7 911 aa14.03□□□□□ -0.16
GTF2B-201ENST00000370500 TBX22Q9Y458 520 aa14.03□□□□□ -0.16
GTF2B-201ENST00000370500 UBAP1LF5GYI3 381 aa14.02□□□□□ -0.17
GTF2B-201ENST00000370500 TOM1O60784 492 aa14.02□□□□□ -0.17
GTF2B-201ENST00000370500 TRPM2O94759 1503 aa14.02□□□□□ -0.17
GTF2B-201ENST00000370500 SPHKAPQ2M3C7 1700 aa14.02□□□□□ -0.17
GTF2B-201ENST00000370500 HRCP23327 699 aa14.01□□□□□ -0.17
GTF2B-201ENST00000370500 IFNL1Q8IU54 200 aa14.01□□□□□ -0.17
GTF2B-201ENST00000370500 SLC26A8Q96RN1 970 aa14.01□□□□□ -0.17
GTF2B-201ENST00000370500 MPHOSPH9Q99550 1183 aa14.01□□□□□ -0.17
GTF2B-201ENST00000370500 LRRC7Q96NW7 1537 aa13.99□□□□□ -0.17
GTF2B-201ENST00000370500 ZNF326Q5BKZ1 582 aaKnown RBP13.99□□□□□ -0.17
GTF2B-201ENST00000370500 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
GTF2B-201ENST00000370500 COLQQ9Y215 455 aaPredicted RBP13.99□□□□□ -0.17
GTF2B-201ENST00000370500 RPGRIP1LQ68CZ1 1315 aa13.98□□□□□ -0.17
GTF2B-201ENST00000370500 PIK3R4Q99570 1358 aa13.98□□□□□ -0.17
GTF2B-201ENST00000370500 DCAF8Q5TAQ9 597 aa13.97□□□□□ -0.17
GTF2B-201ENST00000370500 TMEM106CQ9BVX2 250 aa13.97□□□□□ -0.17
GTF2B-201ENST00000370500 MYO5BQ9ULV0 1848 aa13.96□□□□□ -0.17
GTF2B-201ENST00000370500 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.18
GTF2B-201ENST00000370500 FAM163AQ96GL9 167 aaPredicted RBP13.96□□□□□ -0.18
GTF2B-201ENST00000370500 CLTCL1P53675 1640 aa13.95□□□□□ -0.18
GTF2B-201ENST00000370500 NKTRP30414 1462 aaKnown RBP13.95□□□□□ -0.18
GTF2B-201ENST00000370500 RAB3GAP2Q9H2M9 1393 aa13.95□□□□□ -0.18
GTF2B-201ENST00000370500 PROSER2Q86WR7 435 aaPredicted RBP13.95□□□□□ -0.18
GTF2B-201ENST00000370500 STRCP1A6NGW2 1772 aa13.94□□□□□ -0.18
GTF2B-201ENST00000370500 DIP2AQ14689 1571 aa13.94□□□□□ -0.18
GTF2B-201ENST00000370500 ADAMTS13Q76LX8 1427 aa13.94□□□□□ -0.18
GTF2B-201ENST00000370500 NUTM2DQ5VT03 806 aaPredicted RBP13.94□□□□□ -0.18
GTF2B-201ENST00000370500 CCDC144AA2RUR9 1427 aa13.93□□□□□ -0.18
GTF2B-201ENST00000370500 NCOA3Q9Y6Q9 1424 aa13.92□□□□□ -0.18
GTF2B-201ENST00000370500 TMEM94Q12767 1356 aa13.92□□□□□ -0.18
GTF2B-201ENST00000370500 NWD1Q149M9 1564 aa13.92□□□□□ -0.18
GTF2B-201ENST00000370500 KIF1BO60333 1816 aa13.92□□□□□ -0.18
GTF2B-201ENST00000370500 SETBP1Q9Y6X0 1596 aa13.9□□□□□ -0.18
GTF2B-201ENST00000370500 PLCG2P16885 1265 aa13.9□□□□□ -0.18
GTF2B-201ENST00000370500 PIP4K2BP78356 416 aa13.9□□□□□ -0.18
GTF2B-201ENST00000370500 NEXMIFQ5QGS0 1516 aa13.89□□□□□ -0.19
GTF2B-201ENST00000370500 AMOTL2Q9Y2J4 779 aa13.89□□□□□ -0.19
GTF2B-201ENST00000370500 CHD2O14647 1828 aaKnown RBP13.88□□□□□ -0.19
GTF2B-201ENST00000370500 PYGBP11216 843 aa13.88□□□□□ -0.19
GTF2B-201ENST00000370500 MSH6P52701 1360 aa13.88□□□□□ -0.19
GTF2B-201ENST00000370500 ANKRD30BQ9BXX2 1392 aa13.88□□□□□ -0.19
GTF2B-201ENST00000370500 LCE2DQ5TA82 110 aaPredicted RBP13.87□□□□□ -0.19
GTF2B-201ENST00000370500 SPATA31E1Q6ZUB1 1445 aa13.86□□□□□ -0.19
GTF2B-201ENST00000370500 C19orf44Q9H6X5 657 aa13.85□□□□□ -0.19
GTF2B-201ENST00000370500 FAM135BQ49AJ0 1406 aa13.85□□□□□ -0.19
GTF2B-201ENST00000370500 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
GTF2B-201ENST00000370500 RGL3Q3MIN7 710 aa13.84□□□□□ -0.19
GTF2B-201ENST00000370500 METP08581 1390 aa13.84□□□□□ -0.19
GTF2B-201ENST00000370500 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
GTF2B-201ENST00000370500 HSPA1LP34931 641 aa13.83□□□□□ -0.19
GTF2B-201ENST00000370500 C14orf37Q86TY3 774 aa13.83□□□□□ -0.19
GTF2B-201ENST00000370500 CADPS2Q86UW7 1296 aa13.83□□□□□ -0.19
GTF2B-201ENST00000370500 KLHL34Q8N239 644 aa13.83□□□□□ -0.19
GTF2B-201ENST00000370500 STAC3Q96MF2 364 aa13.83□□□□□ -0.19
GTF2B-201ENST00000370500 XIRP1Q702N8 1843 aaKnown RBP13.83□□□□□ -0.2
GTF2B-201ENST00000370500 PTPRUQ92729 1446 aa13.83□□□□□ -0.2
GTF2B-201ENST00000370500 GSE1Q14687 1217 aa13.83□□□□□ -0.2
GTF2B-201ENST00000370500 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.2
GTF2B-201ENST00000370500 SLAIN2Q9P270 581 aa13.83□□□□□ -0.2
GTF2B-201ENST00000370500 ATF3P18847 181 aa13.82□□□□□ -0.2
GTF2B-201ENST00000370500 VASPP50552 380 aaPredicted RBP13.82□□□□□ -0.2
GTF2B-201ENST00000370500 IRX5P78411 483 aaPredicted RBP13.82□□□□□ -0.2
GTF2B-201ENST00000370500 SLAIN1Q8ND83 568 aa13.81□□□□□ -0.2
GTF2B-201ENST00000370500 PPLO60437 1756 aa13.8□□□□□ -0.2
GTF2B-201ENST00000370500 ADGRF5Q8IZF2 1346 aa13.79□□□□□ -0.2
GTF2B-201ENST00000370500 DCCP43146 1447 aa13.79□□□□□ -0.2
GTF2B-201ENST00000370500 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
GTF2B-201ENST00000370500 OCEL1Q9H607 264 aa13.79□□□□□ -0.2
GTF2B-201ENST00000370500 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
GTF2B-201ENST00000370500 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
GTF2B-201ENST00000370500 PTCH1Q13635 1447 aa13.77□□□□□ -0.2
GTF2B-201ENST00000370500 ZNF467Q7Z7K2 595 aaPredicted RBP13.76□□□□□ -0.21
GTF2B-201ENST00000370500 C14orf93Q9H972 538 aaKnown RBP13.76□□□□□ -0.21
GTF2B-201ENST00000370500 PIK3C2GO75747 1445 aa13.76□□□□□ -0.21
GTF2B-201ENST00000370500 MYOM2P54296 1465 aa13.75□□□□□ -0.21
GTF2B-201ENST00000370500 SIRT1Q96EB6 747 aa13.74□□□□□ -0.21
GTF2B-201ENST00000370500 ABCC11Q96J66 1382 aa13.74□□□□□ -0.21
GTF2B-201ENST00000370500 ADGRL3Q9HAR2 1447 aa13.74□□□□□ -0.21
GTF2B-201ENST00000370500 NRXN1Q9ULB1 1477 aa13.74□□□□□ -0.21
GTF2B-201ENST00000370500 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
GTF2B-201ENST00000370500 IFT172Q9UG01 1749 aa13.73□□□□□ -0.21
GTF2B-201ENST00000370500 LRPPRCP42704 1394 aaKnown RBP13.73□□□□□ -0.21
GTF2B-201ENST00000370500 DISP3Q9P2K9 1392 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms