RNA–Protein interactions for RNA: ENST00000369387.4

H3F3AP4-201, Transcript of H3 histone, family 3A, pseudogene 4, humanhuman

BASIC

Gene H3F3AP4, Length 411 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP4-201ENST00000369387 MRS2Q9HD23 443 aa13.07□□□□□ -0.32
H3F3AP4-201ENST00000369387 MINK1Q8N4C8 1332 aaPredicted RBP13.07□□□□□ -0.32
H3F3AP4-201ENST00000369387 MYBBP1AQ9BQG0 1328 aaKnown RBP13.07□□□□□ -0.32
H3F3AP4-201ENST00000369387 CCDC184Q52MB2 194 aa13.06□□□□□ -0.32
H3F3AP4-201ENST00000369387 TBX22Q9Y458 520 aa13.05□□□□□ -0.32
H3F3AP4-201ENST00000369387 NPC1L1Q9UHC9 1359 aa13.05□□□□□ -0.32
H3F3AP4-201ENST00000369387 NINLQ9Y2I6 1382 aa13.05□□□□□ -0.32
H3F3AP4-201ENST00000369387 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
H3F3AP4-201ENST00000369387 CC2D1BQ5T0F9 858 aaKnown RBP13.04□□□□□ -0.32
H3F3AP4-201ENST00000369387 WAPLQ7Z5K2 1190 aa13.04□□□□□ -0.32
H3F3AP4-201ENST00000369387 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
H3F3AP4-201ENST00000369387 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
H3F3AP4-201ENST00000369387 ATAD2Q6PL18 1390 aa13.04□□□□□ -0.32
H3F3AP4-201ENST00000369387 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
H3F3AP4-201ENST00000369387 SETD1BQ9UPS6 1966 aaKnown RBP13.03□□□□□ -0.32
H3F3AP4-201ENST00000369387 SLC26A8Q96RN1 970 aa13.03□□□□□ -0.32
H3F3AP4-201ENST00000369387 CABP2Q9NPB3 220 aa13.03□□□□□ -0.32
H3F3AP4-201ENST00000369387 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
H3F3AP4-201ENST00000369387 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.33
H3F3AP4-201ENST00000369387 SLC12A5Q9H2X9 1139 aa13.02□□□□□ -0.33
H3F3AP4-201ENST00000369387 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
H3F3AP4-201ENST00000369387 CDK19Q9BWU1 502 aa13.01□□□□□ -0.33
H3F3AP4-201ENST00000369387 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
H3F3AP4-201ENST00000369387 ANKRD36BQ8N2N9 1353 aa13.01□□□□□ -0.33
H3F3AP4-201ENST00000369387 PTPRUQ92729 1446 aa13.01□□□□□ -0.33
H3F3AP4-201ENST00000369387 USP32Q8NFA0 1604 aa13□□□□□ -0.33
H3F3AP4-201ENST00000369387 NSD3Q9BZ95 1437 aa13□□□□□ -0.33
H3F3AP4-201ENST00000369387 PIK3R4Q99570 1358 aa13□□□□□ -0.33
H3F3AP4-201ENST00000369387 ROBO2Q9HCK4 1378 aa13□□□□□ -0.33
H3F3AP4-201ENST00000369387 FAM9BQ8IZU0 186 aa12.99□□□□□ -0.33
H3F3AP4-201ENST00000369387 ADGRB2O60241 1585 aa12.98□□□□□ -0.33
H3F3AP4-201ENST00000369387 PTCH1Q13635 1447 aa12.98□□□□□ -0.33
H3F3AP4-201ENST00000369387 WASLO00401 505 aaPredicted RBP12.98□□□□□ -0.33
H3F3AP4-201ENST00000369387 AMOTL2Q9Y2J4 779 aa12.98□□□□□ -0.33
H3F3AP4-201ENST00000369387 XRN1Q8IZH2 1706 aaKnown RBP12.98□□□□□ -0.33
H3F3AP4-201ENST00000369387 TERF2IPQ9NYB0 399 aa12.97□□□□□ -0.33
H3F3AP4-201ENST00000369387 PNISRQ8TF01 805 aaKnown RBP12.96□□□□□ -0.33
H3F3AP4-201ENST00000369387 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.34
H3F3AP4-201ENST00000369387 NPHP4O75161 1426 aaPredicted RBP12.96□□□□□ -0.34
H3F3AP4-201ENST00000369387 A0A1W2PP64 1363 aa12.95□□□□□ -0.34
H3F3AP4-201ENST00000369387 NSD2O96028 1365 aa12.95□□□□□ -0.34
H3F3AP4-201ENST00000369387 CGNL1Q0VF96 1302 aa12.95□□□□□ -0.34
H3F3AP4-201ENST00000369387 PPP2R1AP30153 589 aa12.95□□□□□ -0.34
H3F3AP4-201ENST00000369387 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.34
H3F3AP4-201ENST00000369387 HDGFL2Q7Z4V5 671 aaPredicted RBP12.95□□□□□ -0.34
H3F3AP4-201ENST00000369387 ATP7BP35670 1465 aa12.95□□□□□ -0.34
H3F3AP4-201ENST00000369387 CD163L1Q9NR16 1453 aa12.94□□□□□ -0.34
H3F3AP4-201ENST00000369387 CABP1Q9NZU7 370 aa12.93□□□□□ -0.34
H3F3AP4-201ENST00000369387 PPIP5K1Q6PFW1 1433 aa12.92□□□□□ -0.34
H3F3AP4-201ENST00000369387 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
H3F3AP4-201ENST00000369387 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
H3F3AP4-201ENST00000369387 CHD2O14647 1828 aaKnown RBP12.92□□□□□ -0.34
H3F3AP4-201ENST00000369387 KCNA6P17658 529 aa12.91□□□□□ -0.34
H3F3AP4-201ENST00000369387 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
H3F3AP4-201ENST00000369387 CDC42BPGQ6DT37 1551 aa12.9□□□□□ -0.34
H3F3AP4-201ENST00000369387 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
H3F3AP4-201ENST00000369387 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
H3F3AP4-201ENST00000369387 INSRP06213 1382 aa12.89□□□□□ -0.35
H3F3AP4-201ENST00000369387 TOPAZ1Q8N9V7 1692 aa12.89□□□□□ -0.35
H3F3AP4-201ENST00000369387 PRR36Q9H6K5 1346 aa12.88□□□□□ -0.35
H3F3AP4-201ENST00000369387 ANKRD26Q9UPS8 1709 aa12.88□□□□□ -0.35
H3F3AP4-201ENST00000369387 KDM4FA0A1W2PPD8 638 aa12.88□□□□□ -0.35
H3F3AP4-201ENST00000369387 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
H3F3AP4-201ENST00000369387 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
H3F3AP4-201ENST00000369387 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
H3F3AP4-201ENST00000369387 NWD1Q149M9 1564 aa12.87□□□□□ -0.35
H3F3AP4-201ENST00000369387 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
H3F3AP4-201ENST00000369387 AKAP12Q02952 1782 aa12.86□□□□□ -0.35
H3F3AP4-201ENST00000369387 MON2Q7Z3U7 1717 aa12.86□□□□□ -0.35
H3F3AP4-201ENST00000369387 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
H3F3AP4-201ENST00000369387 POLR3AO14802 1390 aaPredicted RBP12.85□□□□□ -0.35
H3F3AP4-201ENST00000369387 PLEKHG3A1L390 1219 aa12.85□□□□□ -0.35
H3F3AP4-201ENST00000369387 FYB1O15117 783 aa12.85□□□□□ -0.35
H3F3AP4-201ENST00000369387 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
H3F3AP4-201ENST00000369387 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
H3F3AP4-201ENST00000369387 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
H3F3AP4-201ENST00000369387 FMN2Q9NZ56 1722 aa12.85□□□□□ -0.35
H3F3AP4-201ENST00000369387 BLMP54132 1417 aaPredicted RBP12.84□□□□□ -0.35
H3F3AP4-201ENST00000369387 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
H3F3AP4-201ENST00000369387 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
H3F3AP4-201ENST00000369387 TNNT2P45379 298 aaPredicted RBP12.83□□□□□ -0.36
H3F3AP4-201ENST00000369387 NKTRP30414 1462 aaKnown RBP12.83□□□□□ -0.36
H3F3AP4-201ENST00000369387 ADGRL3Q9HAR2 1447 aa12.82□□□□□ -0.36
H3F3AP4-201ENST00000369387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.82□□□□□ -0.36
H3F3AP4-201ENST00000369387 CFAP53Q96M91 514 aa12.82□□□□□ -0.36
H3F3AP4-201ENST00000369387 ACEP12821 1306 aa12.82□□□□□ -0.36
H3F3AP4-201ENST00000369387 LMTK3Q96Q04 1460 aa12.81□□□□□ -0.36
H3F3AP4-201ENST00000369387 HSPA2P54652 639 aa12.81□□□□□ -0.36
H3F3AP4-201ENST00000369387 GTF3C3Q9Y5Q9 886 aa12.81□□□□□ -0.36
H3F3AP4-201ENST00000369387 NRKQ7Z2Y5 1582 aa12.81□□□□□ -0.36
H3F3AP4-201ENST00000369387 MTHFSP49914 203 aa12.8□□□□□ -0.36
H3F3AP4-201ENST00000369387 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
H3F3AP4-201ENST00000369387 SCAF1Q9H7N4 1312 aaKnown RBP12.8□□□□□ -0.36
H3F3AP4-201ENST00000369387 USP6P35125 1406 aa12.79□□□□□ -0.36
H3F3AP4-201ENST00000369387 SHPRHQ149N8 1683 aa12.78□□□□□ -0.36
H3F3AP4-201ENST00000369387 PROSER2Q86WR7 435 aaPredicted RBP12.78□□□□□ -0.36
H3F3AP4-201ENST00000369387 NME9Q86XW9 330 aa12.78□□□□□ -0.36
H3F3AP4-201ENST00000369387 TTC21BQ7Z4L5 1316 aa12.78□□□□□ -0.36
H3F3AP4-201ENST00000369387 RGPD8O14715 1765 aaPredicted RBP12.78□□□□□ -0.36
H3F3AP4-201ENST00000369387 C14orf37Q86TY3 774 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms