RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 CAVIN1Q6NZI2 390 aaKnown RBP18.71■□□□□ 0.59
SHC1-205ENST00000368453 SMC5Q8IY18 1101 aa18.7■□□□□ 0.58
SHC1-205ENST00000368453 PTPRGP23470 1445 aa18.7■□□□□ 0.58
SHC1-205ENST00000368453 CIZ1Q9ULV3 898 aaPredicted RBP18.7■□□□□ 0.58
SHC1-205ENST00000368453 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
SHC1-205ENST00000368453 KIAA0556O60303 1618 aa18.7■□□□□ 0.58
SHC1-205ENST00000368453 MCTP1Q6DN14 999 aa18.7■□□□□ 0.58
SHC1-205ENST00000368453 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
SHC1-205ENST00000368453 CD2BP2O95400 341 aaKnown RBP18.69■□□□□ 0.58
SHC1-205ENST00000368453 PTMSP20962 102 aa18.69■□□□□ 0.58
SHC1-205ENST00000368453 CROCC2H7BZ55 1655 aa18.68■□□□□ 0.58
SHC1-205ENST00000368453 CHMP7Q8WUX9 453 aaPredicted RBP18.68■□□□□ 0.58
SHC1-205ENST00000368453 PPP1R9BQ96SB3 815 aa18.68■□□□□ 0.58
SHC1-205ENST00000368453 CLASP1Q7Z460 1538 aa18.68■□□□□ 0.58
SHC1-205ENST00000368453 U2AF1L5P0DN76 240 aaPredicted RBP18.67■□□□□ 0.58
SHC1-205ENST00000368453 U2AF1Q01081 240 aaKnown RBP eCLIP18.67■□□□□ 0.58
SHC1-205ENST00000368453 SNX21Q969T3 373 aa18.67■□□□□ 0.58
SHC1-205ENST00000368453 RTEL1-TNFRSF6BF6WH68 1400 aa18.67■□□□□ 0.58
SHC1-205ENST00000368453 ZHX1Q9UKY1 873 aaPredicted RBP18.66■□□□□ 0.58
SHC1-205ENST00000368453 ABCC2Q92887 1545 aa18.66■□□□□ 0.58
SHC1-205ENST00000368453 K7ELQ4 463 aaPredicted RBP18.66■□□□□ 0.58
SHC1-205ENST00000368453 GAS2L2Q8NHY3 880 aa18.65■□□□□ 0.58
SHC1-205ENST00000368453 PRDM4Q9UKN5 801 aa18.65■□□□□ 0.58
SHC1-205ENST00000368453 DDX19BQ9UMR2 479 aa18.65■□□□□ 0.58
SHC1-205ENST00000368453 TRIM27P14373 513 aa18.65■□□□□ 0.58
SHC1-205ENST00000368453 DDIT3P35638 169 aa18.65■□□□□ 0.58
SHC1-205ENST00000368453 RBM25P49756 843 aaKnown RBP18.65■□□□□ 0.58
SHC1-205ENST00000368453 MAP7D2Q96T17 732 aa18.65■□□□□ 0.58
SHC1-205ENST00000368453 BAG4O95429 457 aaKnown RBP18.65■□□□□ 0.58
SHC1-205ENST00000368453 EXOSC9Q06265 439 aaKnown RBP18.65■□□□□ 0.58
SHC1-205ENST00000368453 WDR63Q8IWG1 891 aa18.65■□□□□ 0.58
SHC1-205ENST00000368453 ANKRD45Q5TZF3 282 aa18.64■□□□□ 0.57
SHC1-205ENST00000368453 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
SHC1-205ENST00000368453 ZMYM3Q14202 1370 aa18.64■□□□□ 0.57
SHC1-205ENST00000368453 DNTTIP2Q5QJE6 756 aaKnown RBP18.64■□□□□ 0.57
SHC1-205ENST00000368453 MTHFSP49914 203 aa18.63■□□□□ 0.57
SHC1-205ENST00000368453 ADAMTS12P58397 1594 aa18.63■□□□□ 0.57
SHC1-205ENST00000368453 KLHL40Q2TBA0 621 aa18.63■□□□□ 0.57
SHC1-205ENST00000368453 SHANK2Q9UPX8 1470 aa18.63■□□□□ 0.57
SHC1-205ENST00000368453 NOB1Q9ULX3 412 aaKnown RBP18.63■□□□□ 0.57
SHC1-205ENST00000368453 ADCY10Q96PN6 1610 aa18.62■□□□□ 0.57
SHC1-205ENST00000368453 TMEM57Q8N5G2 664 aa18.62■□□□□ 0.57
SHC1-205ENST00000368453 PTMAP06454 111 aaKnown RBP18.62■□□□□ 0.57
SHC1-205ENST00000368453 SSH1Q8WYL5 1049 aa18.61■□□□□ 0.57
SHC1-205ENST00000368453 JPH4Q96JJ6 628 aa18.61■□□□□ 0.57
SHC1-205ENST00000368453 CFAP53Q96M91 514 aa18.61■□□□□ 0.57
SHC1-205ENST00000368453 RBSNQ9H1K0 784 aa18.61■□□□□ 0.57
SHC1-205ENST00000368453 CCDC141Q6ZP82 1450 aa18.61■□□□□ 0.57
SHC1-205ENST00000368453 HDAC1Q13547 482 aaPredicted RBP18.61■□□□□ 0.57
SHC1-205ENST00000368453 CFAP70Q5T0N1 1121 aa18.61■□□□□ 0.57
SHC1-205ENST00000368453 FOXD4L5Q5VV16 416 aaPredicted RBP18.61■□□□□ 0.57
SHC1-205ENST00000368453 FOXD4L4Q8WXT5 416 aaPredicted RBP18.61■□□□□ 0.57
SHC1-205ENST00000368453 PBRM1Q86U86 1689 aa18.61■□□□□ 0.57
SHC1-205ENST00000368453 RNF214Q8ND24 703 aa18.6■□□□□ 0.57
SHC1-205ENST00000368453 U2SURPO15042 1029 aaKnown RBP18.6■□□□□ 0.57
SHC1-205ENST00000368453 MPNDQ8N594 471 aa18.6■□□□□ 0.57
SHC1-205ENST00000368453 ZSCAN23Q3MJ62 389 aa18.6■□□□□ 0.57
SHC1-205ENST00000368453 ATF7IPQ6VMQ6 1270 aa18.6■□□□□ 0.57
SHC1-205ENST00000368453 RBM27Q9P2N5 1060 aaKnown RBP18.6■□□□□ 0.57
SHC1-205ENST00000368453 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
SHC1-205ENST00000368453 PRPF40AO75400 957 aaKnown RBP18.59■□□□□ 0.57
SHC1-205ENST00000368453 PRIM1P49642 420 aaKnown RBP18.59■□□□□ 0.57
SHC1-205ENST00000368453 CHD1LQ86WJ1 897 aa18.59■□□□□ 0.57
SHC1-205ENST00000368453 NUP160Q12769 1436 aa18.59■□□□□ 0.57
SHC1-205ENST00000368453 CDC42BPAQ5VT25 1732 aa18.59■□□□□ 0.57
SHC1-205ENST00000368453 MAGI1Q96QZ7 1491 aaPredicted RBP18.59■□□□□ 0.57
SHC1-205ENST00000368453 EIF2AK4Q9P2K8 1649 aaKnown RBP18.58■□□□□ 0.57
SHC1-205ENST00000368453 C1orf115Q9H7X2 142 aa18.58■□□□□ 0.56
SHC1-205ENST00000368453 NOL7Q9UMY1 257 aaKnown RBP18.58■□□□□ 0.56
SHC1-205ENST00000368453 NPC1L1Q9UHC9 1359 aa18.58■□□□□ 0.56
SHC1-205ENST00000368453 SLC12A5Q9H2X9 1139 aa18.58■□□□□ 0.56
SHC1-205ENST00000368453 NCOA3Q9Y6Q9 1424 aa18.57■□□□□ 0.56
SHC1-205ENST00000368453 RSPH4AQ5TD94 716 aa18.57■□□□□ 0.56
SHC1-205ENST00000368453 KIF2CQ99661 725 aa18.57■□□□□ 0.56
SHC1-205ENST00000368453 SCAF11Q99590 1463 aaKnown RBP18.57■□□□□ 0.56
SHC1-205ENST00000368453 ABCC10Q5T3U5 1492 aa18.56■□□□□ 0.56
SHC1-205ENST00000368453 POLR3AO14802 1390 aaPredicted RBP18.56■□□□□ 0.56
SHC1-205ENST00000368453 TERF1P54274 439 aa18.55■□□□□ 0.56
SHC1-205ENST00000368453 NUCB1Q02818 461 aa18.55■□□□□ 0.56
SHC1-205ENST00000368453 TBC1D9Q6ZT07 1266 aa18.55■□□□□ 0.56
SHC1-205ENST00000368453 PKP1Q13835 747 aa18.54■□□□□ 0.56
SHC1-205ENST00000368453 TPRNQ4KMQ1 711 aa18.54■□□□□ 0.56
SHC1-205ENST00000368453 CHAMP1Q96JM3 812 aa18.54■□□□□ 0.56
SHC1-205ENST00000368453 ZKSCAN5Q9Y2L8 839 aa18.54■□□□□ 0.56
SHC1-205ENST00000368453 CSPP1Q1MSJ5 1256 aa18.54■□□□□ 0.56
SHC1-205ENST00000368453 CARMIL2Q6F5E8 1435 aa18.54■□□□□ 0.56
SHC1-205ENST00000368453 SYNMO15061 1565 aa18.53■□□□□ 0.56
SHC1-205ENST00000368453 AK9Q5TCS8 1911 aa18.53■□□□□ 0.56
SHC1-205ENST00000368453 SYCE3A1L190 88 aa18.53■□□□□ 0.56
SHC1-205ENST00000368453 DYNC1I1O14576 645 aa18.52■□□□□ 0.56
SHC1-205ENST00000368453 ZNF500O60304 480 aaPredicted RBP18.52■□□□□ 0.56
SHC1-205ENST00000368453 BMP2KLQ5H9B9 411 aa18.52■□□□□ 0.56
SHC1-205ENST00000368453 TSC1Q92574 1164 aa18.52■□□□□ 0.56
SHC1-205ENST00000368453 ZBTB40Q9NUA8 1239 aa18.52■□□□□ 0.56
SHC1-205ENST00000368453 LAMC1P11047 1609 aa18.52■□□□□ 0.56
SHC1-205ENST00000368453 CHGAP10645 457 aaKnown RBP18.52■□□□□ 0.55
SHC1-205ENST00000368453 ZNF445P59923 1031 aa18.52■□□□□ 0.55
SHC1-205ENST00000368453 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.55
SHC1-205ENST00000368453 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.52■□□□□ 0.55
SHC1-205ENST00000368453 KIF16BQ96L93 1317 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms