RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 C1orf115Q9H7X2 142 aa15.76■□□□□ 0.11
PTPRK-207ENST00000368226 XPCQ01831 940 aaPredicted RBP15.75■□□□□ 0.11
PTPRK-207ENST00000368226 PPP1R1BQ9UD71 204 aaPredicted RBP15.75■□□□□ 0.11
PTPRK-207ENST00000368226 CFTRP13569 1480 aa15.75■□□□□ 0.11
PTPRK-207ENST00000368226 CDCA7LQ96GN5 454 aa15.75■□□□□ 0.11
PTPRK-207ENST00000368226 VPS37CA5D8V6 355 aaPredicted RBP15.74■□□□□ 0.11
PTPRK-207ENST00000368226 RAPGEF3O95398 923 aa15.74■□□□□ 0.11
PTPRK-207ENST00000368226 CEP89Q96ST8 783 aa15.74■□□□□ 0.11
PTPRK-207ENST00000368226 TPM3P06753 285 aa15.74■□□□□ 0.11
PTPRK-207ENST00000368226 TRDNQ13061 729 aa15.74■□□□□ 0.11
PTPRK-207ENST00000368226 PRKAR2BP31323 418 aa15.74■□□□□ 0.11
PTPRK-207ENST00000368226 LRRFIP1Q32MZ4 808 aaKnown RBP15.74■□□□□ 0.11
PTPRK-207ENST00000368226 DDX11L8A8MPP1 907 aa15.73■□□□□ 0.11
PTPRK-207ENST00000368226 UBTFL1P0CB47 393 aaPredicted RBP15.73■□□□□ 0.11
PTPRK-207ENST00000368226 CCAR2Q8N163 923 aaKnown RBP15.73■□□□□ 0.11
PTPRK-207ENST00000368226 BECN2A8MW95 431 aa15.73■□□□□ 0.11
PTPRK-207ENST00000368226 REC8O95072 547 aa15.73■□□□□ 0.11
PTPRK-207ENST00000368226 GPRASP1Q5JY77 1395 aa15.73■□□□□ 0.11
PTPRK-207ENST00000368226 GOLGA6L19H0YKK7 550 aa15.73■□□□□ 0.11
PTPRK-207ENST00000368226 PCMTD1Q96MG8 357 aaPredicted RBP15.72■□□□□ 0.11
PTPRK-207ENST00000368226 GRIN2BQ13224 1484 aa15.72■□□□□ 0.11
PTPRK-207ENST00000368226 DDX54Q8TDD1 881 aaKnown RBP15.72■□□□□ 0.11
PTPRK-207ENST00000368226 SLC26A8Q96RN1 970 aa15.72■□□□□ 0.11
PTPRK-207ENST00000368226 PIP4K2BP78356 416 aa15.72■□□□□ 0.11
PTPRK-207ENST00000368226 WASHC2AQ641Q2 1341 aa15.72■□□□□ 0.11
PTPRK-207ENST00000368226 SLC12A5Q9H2X9 1139 aa15.72■□□□□ 0.11
PTPRK-207ENST00000368226 ROCK1Q13464 1354 aa15.72■□□□□ 0.11
PTPRK-207ENST00000368226 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.11
PTPRK-207ENST00000368226 CPLX2Q6PUV4 134 aaKnown RBP15.71■□□□□ 0.11
PTPRK-207ENST00000368226 DNAJC2Q99543 621 aaKnown RBP15.71■□□□□ 0.11
PTPRK-207ENST00000368226 TCP11L2Q8N4U5 519 aa15.71■□□□□ 0.11
PTPRK-207ENST00000368226 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.11
PTPRK-207ENST00000368226 ERICH2A1L162 156 aa15.71■□□□□ 0.11
PTPRK-207ENST00000368226 BICD2Q8TD16 824 aa15.71■□□□□ 0.11
PTPRK-207ENST00000368226 TSR2Q969E8 191 aaKnown RBP15.71■□□□□ 0.11
PTPRK-207ENST00000368226 CWC22Q9HCG8 908 aaKnown RBP15.71■□□□□ 0.11
PTPRK-207ENST00000368226 CDK19Q9BWU1 502 aa15.71■□□□□ 0.1
PTPRK-207ENST00000368226 SYNJ2O15056 1496 aa15.7■□□□□ 0.1
PTPRK-207ENST00000368226 CABP1Q9NZU7 370 aa15.7■□□□□ 0.1
PTPRK-207ENST00000368226 STK11IPQ8N1F8 1099 aa15.7■□□□□ 0.1
PTPRK-207ENST00000368226 CNTLNQ9NXG0 1405 aa15.7■□□□□ 0.1
PTPRK-207ENST00000368226 CASKIN1Q8WXD9 1431 aa15.7■□□□□ 0.1
PTPRK-207ENST00000368226 ATP6V1DQ9Y5K8 247 aa15.69■□□□□ 0.1
PTPRK-207ENST00000368226 EXOSC9Q06265 439 aaKnown RBP15.68■□□□□ 0.1
PTPRK-207ENST00000368226 PPP2R1AP30153 589 aa15.68■□□□□ 0.1
PTPRK-207ENST00000368226 RNF20Q5VTR2 975 aa15.68■□□□□ 0.1
PTPRK-207ENST00000368226 ZNF592Q92610 1267 aa15.68■□□□□ 0.1
PTPRK-207ENST00000368226 INTS3Q68E01 1043 aaKnown RBP15.68■□□□□ 0.1
PTPRK-207ENST00000368226 TSR1Q2NL82 804 aaKnown RBP15.67■□□□□ 0.1
PTPRK-207ENST00000368226 ERC2O15083 957 aa15.67■□□□□ 0.1
PTPRK-207ENST00000368226 BCL11BQ9C0K0 894 aaPredicted RBP15.67■□□□□ 0.1
PTPRK-207ENST00000368226 SULT6B1Q6IMI4 303 aa15.67■□□□□ 0.1
PTPRK-207ENST00000368226 TOM1L2Q6ZVM7 507 aa15.67■□□□□ 0.1
PTPRK-207ENST00000368226 FSD1Q9BTV5 496 aa15.67■□□□□ 0.1
PTPRK-207ENST00000368226 RRBP1Q9P2E9 1410 aaKnown RBP15.67■□□□□ 0.1
PTPRK-207ENST00000368226 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
PTPRK-207ENST00000368226 SURF6O75683 361 aaKnown RBP15.66■□□□□ 0.1
PTPRK-207ENST00000368226 SMC3Q9UQE7 1217 aa15.66■□□□□ 0.1
PTPRK-207ENST00000368226 MYL6BP14649 208 aa15.66■□□□□ 0.1
PTPRK-207ENST00000368226 RRS1Q15050 365 aaKnown RBP15.66■□□□□ 0.1
PTPRK-207ENST00000368226 FBXO3Q9UK99 471 aa15.66■□□□□ 0.1
PTPRK-207ENST00000368226 TPM2P07951 284 aa15.65■□□□□ 0.1
PTPRK-207ENST00000368226 KIF6Q6ZMV9 814 aa15.65■□□□□ 0.1
PTPRK-207ENST00000368226 RALYLQ86SE5 291 aaKnown RBP15.65■□□□□ 0.1
PTPRK-207ENST00000368226 SIL1Q9H173 461 aa15.65■□□□□ 0.1
PTPRK-207ENST00000368226 PLEKHO1Q53GL0 409 aaPredicted RBP15.65■□□□□ 0.1
PTPRK-207ENST00000368226 SYNJ1O43426 1573 aa15.65■□□□□ 0.1
PTPRK-207ENST00000368226 MAP4K4O95819 1239 aaPredicted RBP15.64■□□□□ 0.09
PTPRK-207ENST00000368226 CCDC30Q5VVM6 783 aa15.64■□□□□ 0.09
PTPRK-207ENST00000368226 IKQ13123 557 aaPredicted RBP15.64■□□□□ 0.09
PTPRK-207ENST00000368226 C9orf84Q5VXU9 1444 aa15.64■□□□□ 0.09
PTPRK-207ENST00000368226 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
PTPRK-207ENST00000368226 GOLGA6L1Q8N7Z2 621 aa15.64■□□□□ 0.09
PTPRK-207ENST00000368226 TWISTNBQ3B726 338 aaPredicted RBP15.64■□□□□ 0.09
PTPRK-207ENST00000368226 HSP90AB4PQ58FF6 505 aa15.64■□□□□ 0.09
PTPRK-207ENST00000368226 NCAPD3P42695 1498 aa15.63■□□□□ 0.09
PTPRK-207ENST00000368226 GAS2L2Q8NHY3 880 aa15.63■□□□□ 0.09
PTPRK-207ENST00000368226 CCDC43Q96MW1 224 aaKnown RBP15.63■□□□□ 0.09
PTPRK-207ENST00000368226 NOB1Q9ULX3 412 aaKnown RBP15.63■□□□□ 0.09
PTPRK-207ENST00000368226 RRP12Q5JTH9 1297 aaKnown RBP15.63■□□□□ 0.09
PTPRK-207ENST00000368226 C22orf23Q9BZE7 217 aa15.63■□□□□ 0.09
PTPRK-207ENST00000368226 TATP17735 454 aaPredicted RBP15.63■□□□□ 0.09
PTPRK-207ENST00000368226 CABP4P57796 275 aa15.62■□□□□ 0.09
PTPRK-207ENST00000368226 MRC2Q9UBG0 1479 aa15.62■□□□□ 0.09
PTPRK-207ENST00000368226 NBPF8Q3BBV2 869 aa15.62■□□□□ 0.09
PTPRK-207ENST00000368226 BCAR3O75815 825 aa15.62■□□□□ 0.09
PTPRK-207ENST00000368226 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
PTPRK-207ENST00000368226 SMG6Q86US8 1419 aaKnown RBP15.61■□□□□ 0.09
PTPRK-207ENST00000368226 ATP2B1P20020 1258 aa15.61■□□□□ 0.09
PTPRK-207ENST00000368226 TPM1P09493 284 aa15.61■□□□□ 0.09
PTPRK-207ENST00000368226 CHMP4CQ96CF2 233 aa15.61■□□□□ 0.09
PTPRK-207ENST00000368226 CNNM1Q9NRU3 951 aa15.61■□□□□ 0.09
PTPRK-207ENST00000368226 THEMISQ8N1K5 641 aaPredicted RBP15.6■□□□□ 0.09
PTPRK-207ENST00000368226 ZNF530Q6P9A1 599 aaPredicted RBP15.6■□□□□ 0.09
PTPRK-207ENST00000368226 CNTROBQ8N137 903 aa15.6■□□□□ 0.09
PTPRK-207ENST00000368226 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
PTPRK-207ENST00000368226 ZC3H6P61129 1189 aaKnown RBP15.59■□□□□ 0.09
PTPRK-207ENST00000368226 HDGFL1Q5TGJ6 251 aa15.59■□□□□ 0.09
PTPRK-207ENST00000368226 CDC45O75419 566 aa15.59■□□□□ 0.09
PTPRK-207ENST00000368226 CC2D2AQ9P2K1 1620 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms