RNA–Protein interactions for RNA: ENST00000366981.8

ATF3-203, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-203ENST00000366981 C14orf93Q9H972 538 aaKnown RBP10.28□□□□□ -0.76
ATF3-203ENST00000366981 NRXN3Q9Y4C0 1643 aa10.28□□□□□ -0.76
ATF3-203ENST00000366981 SETD1BQ9UPS6 1966 aaKnown RBP10.26□□□□□ -0.77
ATF3-203ENST00000366981 MYOM1P52179 1685 aa10.26□□□□□ -0.77
ATF3-203ENST00000366981 NLRP1Q9C000 1473 aa10.25□□□□□ -0.77
ATF3-203ENST00000366981 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
ATF3-203ENST00000366981 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
ATF3-203ENST00000366981 VGFO15240 615 aaPredicted RBP10.24□□□□□ -0.77
ATF3-203ENST00000366981 ECM2O94769 699 aaPredicted RBP10.24□□□□□ -0.77
ATF3-203ENST00000366981 CFAP70Q5T0N1 1121 aa10.24□□□□□ -0.77
ATF3-203ENST00000366981 ARXQ96QS3 562 aa10.24□□□□□ -0.77
ATF3-203ENST00000366981 ALKQ9UM73 1620 aa10.24□□□□□ -0.77
ATF3-203ENST00000366981 QRICH2Q9H0J4 1663 aa10.24□□□□□ -0.77
ATF3-203ENST00000366981 TNRQ92752 1358 aa10.24□□□□□ -0.77
ATF3-203ENST00000366981 CCER2I3L3R5 266 aa10.23□□□□□ -0.77
ATF3-203ENST00000366981 ERICH6Q7L0X2 663 aa10.23□□□□□ -0.77
ATF3-203ENST00000366981 DAXXQ9UER7 740 aaPredicted RBP10.23□□□□□ -0.77
ATF3-203ENST00000366981 KNDC1Q76NI1 1749 aa10.23□□□□□ -0.77
ATF3-203ENST00000366981 EIF3AQ14152 1382 aaKnown RBP10.23□□□□□ -0.77
ATF3-203ENST00000366981 ARHGAP23Q9P227 1491 aa10.23□□□□□ -0.77
ATF3-203ENST00000366981 SLIT1O75093 1534 aa10.23□□□□□ -0.77
ATF3-203ENST00000366981 ZNF142P52746 1687 aaPredicted RBP10.22□□□□□ -0.77
ATF3-203ENST00000366981 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
ATF3-203ENST00000366981 ZNF335Q9H4Z2 1342 aaPredicted RBP10.22□□□□□ -0.77
ATF3-203ENST00000366981 DLC1Q96QB1 1528 aa10.22□□□□□ -0.77
ATF3-203ENST00000366981 TSHZ2Q9NRE2 1034 aa10.21□□□□□ -0.77
ATF3-203ENST00000366981 RIMS2Q9UQ26 1411 aa10.21□□□□□ -0.78
ATF3-203ENST00000366981 TULP1O00294 542 aaPredicted RBP10.2□□□□□ -0.78
ATF3-203ENST00000366981 HSPA1LP34931 641 aa10.2□□□□□ -0.78
ATF3-203ENST00000366981 CHGAP10645 457 aaKnown RBP10.19□□□□□ -0.78
ATF3-203ENST00000366981 MED14O60244 1454 aa10.18□□□□□ -0.78
ATF3-203ENST00000366981 TMEM2Q9UHN6 1383 aa10.18□□□□□ -0.78
ATF3-203ENST00000366981 PER1O15534 1290 aaPredicted RBP10.18□□□□□ -0.78
ATF3-203ENST00000366981 ANP32CO43423 234 aa10.18□□□□□ -0.78
ATF3-203ENST00000366981 TMF1P82094 1093 aa10.18□□□□□ -0.78
ATF3-203ENST00000366981 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
ATF3-203ENST00000366981 ESF1Q9H501 851 aaKnown RBP10.18□□□□□ -0.78
ATF3-203ENST00000366981 PRKRIP1Q9H875 184 aaPredicted RBP10.18□□□□□ -0.78
ATF3-203ENST00000366981 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
ATF3-203ENST00000366981 KTN1Q86UP2 1357 aaKnown RBP10.17□□□□□ -0.78
ATF3-203ENST00000366981 TULP4Q9NRJ4 1543 aa10.17□□□□□ -0.78
ATF3-203ENST00000366981 TECPR2O15040 1411 aa10.16□□□□□ -0.78
ATF3-203ENST00000366981 YTHDC2Q9H6S0 1430 aaKnown RBP10.16□□□□□ -0.78
ATF3-203ENST00000366981 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.16□□□□□ -0.78
ATF3-203ENST00000366981 CEP170BQ9Y4F5 1589 aaPredicted RBP10.16□□□□□ -0.78
ATF3-203ENST00000366981 CPS1P31327 1500 aa10.16□□□□□ -0.78
ATF3-203ENST00000366981 CENPJQ9HC77 1338 aaPredicted RBP10.15□□□□□ -0.78
ATF3-203ENST00000366981 CDCA8Q53HL2 280 aa10.15□□□□□ -0.78
ATF3-203ENST00000366981 ADAMTS13Q76LX8 1427 aa10.15□□□□□ -0.79
ATF3-203ENST00000366981 USP32Q8NFA0 1604 aa10.15□□□□□ -0.79
ATF3-203ENST00000366981 LRPPRCP42704 1394 aaKnown RBP10.14□□□□□ -0.79
ATF3-203ENST00000366981 DIP2AQ14689 1571 aa10.14□□□□□ -0.79
ATF3-203ENST00000366981 NBR1Q14596 966 aa10.14□□□□□ -0.79
ATF3-203ENST00000366981 ABCC11Q96J66 1382 aa10.14□□□□□ -0.79
ATF3-203ENST00000366981 NPC1L1Q9UHC9 1359 aa10.14□□□□□ -0.79
ATF3-203ENST00000366981 PLEKHG1Q9ULL1 1385 aa10.14□□□□□ -0.79
ATF3-203ENST00000366981 NCKAP5LQ9HCH0 1330 aa10.13□□□□□ -0.79
ATF3-203ENST00000366981 SIRT1Q96EB6 747 aa10.13□□□□□ -0.79
ATF3-203ENST00000366981 PARD3Q8TEW0 1356 aa10.13□□□□□ -0.79
ATF3-203ENST00000366981 RGL2O15211 777 aa10.12□□□□□ -0.79
ATF3-203ENST00000366981 TOM1O60784 492 aa10.12□□□□□ -0.79
ATF3-203ENST00000366981 HDGFP51858 240 aaKnown RBP10.12□□□□□ -0.79
ATF3-203ENST00000366981 TMEM132EQ6IEE7 984 aa10.12□□□□□ -0.79
ATF3-203ENST00000366981 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
ATF3-203ENST00000366981 XRN1Q8IZH2 1706 aaKnown RBP10.11□□□□□ -0.79
ATF3-203ENST00000366981 ADGRB2O60241 1585 aa10.11□□□□□ -0.79
ATF3-203ENST00000366981 FAM135BQ49AJ0 1406 aa10.11□□□□□ -0.79
ATF3-203ENST00000366981 NUTM2DQ5VT03 806 aaPredicted RBP10.11□□□□□ -0.79
ATF3-203ENST00000366981 STAG3Q9UJ98 1225 aa10.11□□□□□ -0.79
ATF3-203ENST00000366981 TRAK1Q9UPV9 953 aa10.1□□□□□ -0.79
ATF3-203ENST00000366981 LTKP29376 864 aa10.09□□□□□ -0.79
ATF3-203ENST00000366981 RALBP1Q15311 655 aa10.09□□□□□ -0.79
ATF3-203ENST00000366981 METP08581 1390 aa10.09□□□□□ -0.79
ATF3-203ENST00000366981 CHD2O14647 1828 aaKnown RBP10.08□□□□□ -0.8
ATF3-203ENST00000366981 PIP4K2BP78356 416 aa10.08□□□□□ -0.8
ATF3-203ENST00000366981 PANK3Q9H999 370 aa10.08□□□□□ -0.8
ATF3-203ENST00000366981 NINLQ9Y2I6 1382 aa10.08□□□□□ -0.8
ATF3-203ENST00000366981 ANKRD26Q9UPS8 1709 aa10.07□□□□□ -0.8
ATF3-203ENST00000366981 THEMISQ8N1K5 641 aaPredicted RBP10.07□□□□□ -0.8
ATF3-203ENST00000366981 RGS17Q9UGC6 210 aaPredicted RBP10.07□□□□□ -0.8
ATF3-203ENST00000366981 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.07□□□□□ -0.8
ATF3-203ENST00000366981 BRD4O60885 1362 aaPredicted RBP10.06□□□□□ -0.8
ATF3-203ENST00000366981 CCDC184Q52MB2 194 aa10.06□□□□□ -0.8
ATF3-203ENST00000366981 PTCH1Q13635 1447 aa10.06□□□□□ -0.8
ATF3-203ENST00000366981 PTPRUQ92729 1446 aa10.06□□□□□ -0.8
ATF3-203ENST00000366981 EVC2Q86UK5 1308 aa10.06□□□□□ -0.8
ATF3-203ENST00000366981 TOPAZ1Q8N9V7 1692 aa10.06□□□□□ -0.8
ATF3-203ENST00000366981 CD163L1Q9NR16 1453 aa10.05□□□□□ -0.8
ATF3-203ENST00000366981 INSRP06213 1382 aa10.05□□□□□ -0.8
ATF3-203ENST00000366981 PIK3R4Q99570 1358 aa10.05□□□□□ -0.8
ATF3-203ENST00000366981 CENPBP07199 599 aaPredicted RBP10.05□□□□□ -0.8
ATF3-203ENST00000366981 TBX22Q9Y458 520 aa10.05□□□□□ -0.8
ATF3-203ENST00000366981 AKAP12Q02952 1782 aa10.05□□□□□ -0.8
ATF3-203ENST00000366981 MYBBP1AQ9BQG0 1328 aaKnown RBP10.05□□□□□ -0.8
ATF3-203ENST00000366981 POLR3GLQ9BT43 218 aa10.04□□□□□ -0.8
ATF3-203ENST00000366981 ATAD2Q6PL18 1390 aa10.03□□□□□ -0.8
ATF3-203ENST00000366981 ANKRD36BQ8N2N9 1353 aa10.03□□□□□ -0.8
ATF3-203ENST00000366981 PLEKHH1Q9ULM0 1364 aa10.03□□□□□ -0.8
ATF3-203ENST00000366981 MON2Q7Z3U7 1717 aa10.03□□□□□ -0.8
ATF3-203ENST00000366981 TXNDC2Q86VQ3 553 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms