RNA–Protein interactions for RNA: ENST00000365155.1

RNU6-1240P-201, Transcript of RNA, U6 small nuclear 1240, pseudogene, humanhuman

BASIC

Gene RNU6-1240P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1240P-201ENST00000365155 SPRYD7Q5W111 196 aa4.4□□□□□ -1.71
RNU6-1240P-201ENST00000365155 GIGYF2Q6Y7W6 1299 aaKnown RBP4.4□□□□□ -1.71
RNU6-1240P-201ENST00000365155 FAM217BQ9NTX9 383 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1240P-201ENST00000365155 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1240P-201ENST00000365155 SWT1Q5T5J6 900 aaKnown RBP4.39□□□□□ -1.71
RNU6-1240P-201ENST00000365155 SAMD7Q7Z3H4 446 aa4.39□□□□□ -1.71
RNU6-1240P-201ENST00000365155 HDGFP51858 240 aaKnown RBP4.38□□□□□ -1.71
RNU6-1240P-201ENST00000365155 ZNF598Q86UK7 904 aaKnown RBP4.38□□□□□ -1.71
RNU6-1240P-201ENST00000365155 FAM117AQ9C073 453 aa4.38□□□□□ -1.71
RNU6-1240P-201ENST00000365155 SLC10A3P09131 477 aa4.37□□□□□ -1.71
RNU6-1240P-201ENST00000365155 CD46P15529 392 aa4.37□□□□□ -1.71
RNU6-1240P-201ENST00000365155 TMEM151AQ8N4L1 468 aa4.37□□□□□ -1.71
RNU6-1240P-201ENST00000365155 IL27Q8NEV9 243 aa4.37□□□□□ -1.71
RNU6-1240P-201ENST00000365155 PLEKHG3A1L390 1219 aa4.36□□□□□ -1.71
RNU6-1240P-201ENST00000365155 DDX11L8A8MPP1 907 aa4.36□□□□□ -1.71
RNU6-1240P-201ENST00000365155 SULF1Q8IWU6 871 aa4.36□□□□□ -1.71
RNU6-1240P-201ENST00000365155 LRCH3Q96II8 777 aa4.36□□□□□ -1.71
RNU6-1240P-201ENST00000365155 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
RNU6-1240P-201ENST00000365155 BTBD11A6QL63 1104 aa4.35□□□□□ -1.71
RNU6-1240P-201ENST00000365155 GDF11O95390 407 aa4.35□□□□□ -1.71
RNU6-1240P-201ENST00000365155 ZNF697Q5TEC3 545 aa4.35□□□□□ -1.71
RNU6-1240P-201ENST00000365155 SLF2Q8IX21 1173 aa4.35□□□□□ -1.71
RNU6-1240P-201ENST00000365155 BEGAINQ9BUH8 593 aa4.35□□□□□ -1.71
RNU6-1240P-201ENST00000365155 AXIN1O15169 862 aa4.34□□□□□ -1.71
RNU6-1240P-201ENST00000365155 GCGRP47871 477 aa4.34□□□□□ -1.71
RNU6-1240P-201ENST00000365155 TMEM132AQ24JP5 1023 aa4.34□□□□□ -1.71
RNU6-1240P-201ENST00000365155 RDH13Q8NBN7 331 aa4.34□□□□□ -1.71
RNU6-1240P-201ENST00000365155 DDRGK1Q96HY6 314 aa4.34□□□□□ -1.71
RNU6-1240P-201ENST00000365155 AVPP01185 164 aa4.33□□□□□ -1.72
RNU6-1240P-201ENST00000365155 GGCXP38435 758 aa4.33□□□□□ -1.72
RNU6-1240P-201ENST00000365155 PPP4CP60510 307 aa4.33□□□□□ -1.72
RNU6-1240P-201ENST00000365155 RASSF7Q02833 373 aa4.33□□□□□ -1.72
RNU6-1240P-201ENST00000365155 RSPH4AQ5TD94 716 aa4.33□□□□□ -1.72
RNU6-1240P-201ENST00000365155 LIAT1Q6ZQX7 453 aa4.33□□□□□ -1.72
RNU6-1240P-201ENST00000365155 SPIRE2Q8WWL2 714 aa4.33□□□□□ -1.72
RNU6-1240P-201ENST00000365155 RNF223E7ERA6 249 aa4.32□□□□□ -1.72
RNU6-1240P-201ENST00000365155 RNF40O75150 1001 aa4.32□□□□□ -1.72
RNU6-1240P-201ENST00000365155 SLC4A3P48751 1232 aa4.32□□□□□ -1.72
RNU6-1240P-201ENST00000365155 TBC1D2Q9BYX2 928 aa4.32□□□□□ -1.72
RNU6-1240P-201ENST00000365155 ACTN4O43707 911 aaKnown RBP4.31□□□□□ -1.72
RNU6-1240P-201ENST00000365155 KDM4AO75164 1064 aa4.31□□□□□ -1.72
RNU6-1240P-201ENST00000365155 CFHP08603 1231 aa4.31□□□□□ -1.72
RNU6-1240P-201ENST00000365155 APLP1P51693 650 aa4.31□□□□□ -1.72
RNU6-1240P-201ENST00000365155 MYSM1Q5VVJ2 828 aa4.31□□□□□ -1.72
RNU6-1240P-201ENST00000365155 GPAT2Q6NUI2 795 aa4.31□□□□□ -1.72
RNU6-1240P-201ENST00000365155 MOXD2PA6NHM9 499 aa4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 NDUFV2P19404 249 aa4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 FUT2Q10981 343 aa4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 SKIV2LQ15477 1246 aaKnown RBP4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 KMT5BQ4FZB7 885 aa4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 SH3D19Q5HYK7 790 aa4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 NUTM1Q86Y26 1132 aa4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 NECTIN2Q92692 538 aa4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 KRTAP17-1Q9BYP8 105 aa4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 RSPH6AQ9H0K4 717 aa4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 GOPCQ9HD26 462 aa4.3□□□□□ -1.72
RNU6-1240P-201ENST00000365155 ERBB4Q15303 1308 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 SPTLC1O15269 473 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 HOXA2O43364 376 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 ATP6V1AP38606 617 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 USP46P62068 366 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 DIXDC1Q155Q3 683 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 RIC3Q7Z5B4 369 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 PROCA1Q8NCQ7 364 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 SLC16A10Q8TF71 515 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 HLA-CQ95604 372 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 TRIM47Q96LD4 638 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 POLR3EQ9NVU0 708 aa4.29□□□□□ -1.72
RNU6-1240P-201ENST00000365155 ADAM23O75077 832 aa4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 GJA5P36382 358 aa4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 SMCPP49901 116 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 PUS10Q3MIT2 529 aaKnown RBP4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 MORN1Q5T089 497 aa4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 RSBN1LQ6PCB5 846 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 PRR14Q9BWN1 585 aa4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 ATP13A2Q9NQ11 1180 aa4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 PKD2L1Q9P0L9 805 aa4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 LIMD1Q9UGP4 676 aa4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 PCDHGC3Q9UN70 934 aa4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 PCDHB15Q9Y5E8 787 aa4.28□□□□□ -1.72
RNU6-1240P-201ENST00000365155 FDX1P10109 184 aa4.27□□□□□ -1.73
RNU6-1240P-201ENST00000365155 VEGFBP49765 207 aa4.27□□□□□ -1.73
RNU6-1240P-201ENST00000365155 GUCA2AQ02747 115 aa4.27□□□□□ -1.73
RNU6-1240P-201ENST00000365155 CTC1Q2NKJ3 1217 aa4.27□□□□□ -1.73
RNU6-1240P-201ENST00000365155 TUSC1Q2TAM9 212 aa4.27□□□□□ -1.73
RNU6-1240P-201ENST00000365155 FBXO31Q5XUX0 539 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1240P-201ENST00000365155 Q8N3U1 123 aa4.27□□□□□ -1.73
RNU6-1240P-201ENST00000365155 IRF7Q92985 503 aa4.27□□□□□ -1.73
RNU6-1240P-201ENST00000365155 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU6-1240P-201ENST00000365155 SLC27A5Q9Y2P5 690 aa4.27□□□□□ -1.73
RNU6-1240P-201ENST00000365155 CLK2P49760 499 aaKnown RBP4.26□□□□□ -1.73
RNU6-1240P-201ENST00000365155 GRIPAP1Q4V328 841 aa4.26□□□□□ -1.73
RNU6-1240P-201ENST00000365155 BLOC1S3Q6QNY0 202 aa4.26□□□□□ -1.73
RNU6-1240P-201ENST00000365155 SCUBE3Q8IX30 993 aa4.26□□□□□ -1.73
RNU6-1240P-201ENST00000365155 PCMTD1Q96MG8 357 aaPredicted RBP4.26□□□□□ -1.73
RNU6-1240P-201ENST00000365155 PCDHB3Q9Y5E6 796 aa4.26□□□□□ -1.73
RNU6-1240P-201ENST00000365155 PPEF1O14829 653 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1240P-201ENST00000365155 QPCTQ16769 361 aa4.25□□□□□ -1.73
RNU6-1240P-201ENST00000365155 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
RNU6-1240P-201ENST00000365155 SYMPKQ92797 1274 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms