RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 FAM198AQ9UFP1 575 aa3.27□□□□□ -1.89
RNU6-478P-201ENST00000363904 ARHGEF15O94989 841 aa3.26□□□□□ -1.89
RNU6-478P-201ENST00000363904 ITGB2P05107 769 aa3.26□□□□□ -1.89
RNU6-478P-201ENST00000363904 ACTN4O43707 911 aaKnown RBP3.25□□□□□ -1.89
RNU6-478P-201ENST00000363904 YBX3P16989 372 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU6-478P-201ENST00000363904 KRT76Q01546 638 aa3.25□□□□□ -1.89
RNU6-478P-201ENST00000363904 SCARF1Q14162 830 aa3.25□□□□□ -1.89
RNU6-478P-201ENST00000363904 NBPF11Q86T75 865 aa3.25□□□□□ -1.89
RNU6-478P-201ENST00000363904 CERKQ8TCT0 537 aa3.25□□□□□ -1.89
RNU6-478P-201ENST00000363904 SPSB2Q99619 263 aa3.25□□□□□ -1.89
RNU6-478P-201ENST00000363904 SOBPA7XYQ1 873 aa3.24□□□□□ -1.89
RNU6-478P-201ENST00000363904 PPFIA3O75145 1194 aa3.24□□□□□ -1.89
RNU6-478P-201ENST00000363904 MAP3K10Q02779 954 aa3.24□□□□□ -1.89
RNU6-478P-201ENST00000363904 EN1Q05925 392 aaPredicted RBP3.24□□□□□ -1.89
RNU6-478P-201ENST00000363904 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
RNU6-478P-201ENST00000363904 DDX12PQ92771 950 aa3.24□□□□□ -1.89
RNU6-478P-201ENST00000363904 ALDH1A1P00352 501 aa3.23□□□□□ -1.89
RNU6-478P-201ENST00000363904 NBR1Q14596 966 aa3.23□□□□□ -1.89
RNU6-478P-201ENST00000363904 WHAMMQ8TF30 809 aa3.23□□□□□ -1.89
RNU6-478P-201ENST00000363904 DDX27Q96GQ7 796 aaKnown RBP3.23□□□□□ -1.89
RNU6-478P-201ENST00000363904 COL25A1Q9BXS0 654 aaPredicted RBP3.23□□□□□ -1.89
RNU6-478P-201ENST00000363904 EMILIN3Q9NT22 766 aa3.23□□□□□ -1.89
RNU6-478P-201ENST00000363904 MAN1A2O60476 641 aa3.22□□□□□ -1.89
RNU6-478P-201ENST00000363904 PODNQ7Z5L7 613 aa3.22□□□□□ -1.89
RNU6-478P-201ENST00000363904 SCUBE3Q8IX30 993 aa3.21□□□□□ -1.9
RNU6-478P-201ENST00000363904 GPR161Q8N6U8 529 aaKnown RBP3.21□□□□□ -1.9
RNU6-478P-201ENST00000363904 BEND7Q8N7W2 519 aaPredicted RBP3.21□□□□□ -1.9
RNU6-478P-201ENST00000363904 LARP6Q9BRS8 491 aaKnown RBP3.21□□□□□ -1.9
RNU6-478P-201ENST00000363904 ENAMQ9NRM1 1142 aa3.21□□□□□ -1.9
RNU6-478P-201ENST00000363904 WASF2Q9Y6W5 498 aa3.21□□□□□ -1.9
RNU6-478P-201ENST00000363904 CFHP08603 1231 aa3.2□□□□□ -1.9
RNU6-478P-201ENST00000363904 TRIM32Q13049 653 aa3.2□□□□□ -1.9
RNU6-478P-201ENST00000363904 PURBQ96QR8 312 aaKnown RBP3.2□□□□□ -1.9
RNU6-478P-201ENST00000363904 CNTNAP5Q8WYK1 1306 aa3.19□□□□□ -1.9
RNU6-478P-201ENST00000363904 NCKAP5LQ9HCH0 1330 aa3.19□□□□□ -1.9
RNU6-478P-201ENST00000363904 MRPL14Q6P1L8 145 aaKnown RBP3.19□□□□□ -1.9
RNU6-478P-201ENST00000363904 KRTAP9-8Q9BYQ0 159 aa3.19□□□□□ -1.9
RNU6-478P-201ENST00000363904 ZFP64Q9NPA5 681 aa3.19□□□□□ -1.9
RNU6-478P-201ENST00000363904 ARID1BQ8NFD5 2236 aaPredicted RBP3.19□□□□□ -1.9
RNU6-478P-201ENST00000363904 TXKP42681 527 aa3.18□□□□□ -1.9
RNU6-478P-201ENST00000363904 FZD5Q13467 585 aa3.18□□□□□ -1.9
RNU6-478P-201ENST00000363904 RC3H1Q5TC82 1133 aaKnown RBP3.18□□□□□ -1.9
RNU6-478P-201ENST00000363904 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
RNU6-478P-201ENST00000363904 KRTAP4-5Q9BYR2 181 aa3.18□□□□□ -1.9
RNU6-478P-201ENST00000363904 SEMA6BQ9H3T3 888 aa3.18□□□□□ -1.9
RNU6-478P-201ENST00000363904 RNFT1Q5M7Z0 435 aa3.17□□□□□ -1.9
RNU6-478P-201ENST00000363904 RBM27Q9P2N5 1060 aaKnown RBP3.17□□□□□ -1.9
RNU6-478P-201ENST00000363904 PAX4O43316 350 aa3.15□□□□□ -1.91
RNU6-478P-201ENST00000363904 PUS10Q3MIT2 529 aaKnown RBP3.15□□□□□ -1.91
RNU6-478P-201ENST00000363904 LYPD4Q6UWN0 246 aa3.15□□□□□ -1.91
RNU6-478P-201ENST00000363904 ADAMTS2O95450 1211 aa3.14□□□□□ -1.91
RNU6-478P-201ENST00000363904 ARTNQ5T4W7 220 aa3.14□□□□□ -1.91
RNU6-478P-201ENST00000363904 NEDD1Q8NHV4 660 aa3.14□□□□□ -1.91
RNU6-478P-201ENST00000363904 KRBA1A5PL33 1030 aa3.13□□□□□ -1.91
RNU6-478P-201ENST00000363904 DPYSL4O14531 572 aa3.13□□□□□ -1.91
RNU6-478P-201ENST00000363904 FMNL1O95466 1100 aaPredicted RBP3.13□□□□□ -1.91
RNU6-478P-201ENST00000363904 CELA2BP08218 269 aaPredicted RBP3.13□□□□□ -1.91
RNU6-478P-201ENST00000363904 ITGB7P26010 798 aa3.13□□□□□ -1.91
RNU6-478P-201ENST00000363904 PRDM9Q9NQV7 894 aa3.13□□□□□ -1.91
RNU6-478P-201ENST00000363904 DNAJB2P25686 324 aa3.12□□□□□ -1.91
RNU6-478P-201ENST00000363904 WNT7BP56706 349 aa3.12□□□□□ -1.91
RNU6-478P-201ENST00000363904 MFSD10Q14728 455 aa3.12□□□□□ -1.91
RNU6-478P-201ENST00000363904 FAM160A2Q8N612 972 aaPredicted RBP3.12□□□□□ -1.91
RNU6-478P-201ENST00000363904 FECHP22830 423 aa3.11□□□□□ -1.91
RNU6-478P-201ENST00000363904 C6orf118Q5T5N4 469 aa3.11□□□□□ -1.91
RNU6-478P-201ENST00000363904 PADI6Q6TGC4 694 aa3.11□□□□□ -1.91
RNU6-478P-201ENST00000363904 EHBP1Q8NDI1 1231 aa3.11□□□□□ -1.91
RNU6-478P-201ENST00000363904 NANOS1Q8WY41 292 aaKnown RBP3.11□□□□□ -1.91
RNU6-478P-201ENST00000363904 EYA1Q99502 592 aa3.11□□□□□ -1.91
RNU6-478P-201ENST00000363904 CDC14CA4D256 554 aa3.1□□□□□ -1.91
RNU6-478P-201ENST00000363904 ECM2O94769 699 aaPredicted RBP3.1□□□□□ -1.91
RNU6-478P-201ENST00000363904 SKOR1P84550 965 aa3.1□□□□□ -1.91
RNU6-478P-201ENST00000363904 ALYREFQ86V81 257 aaKnown RBP3.1□□□□□ -1.91
RNU6-478P-201ENST00000363904 RYDENQ9NUL5 291 aaKnown RBP3.1□□□□□ -1.91
RNU6-478P-201ENST00000363904 UPP2O95045 317 aa3.09□□□□□ -1.91
RNU6-478P-201ENST00000363904 SRSF11Q05519 484 aaKnown RBP3.09□□□□□ -1.91
RNU6-478P-201ENST00000363904 MCTP1Q6DN14 999 aa3.09□□□□□ -1.91
RNU6-478P-201ENST00000363904 SV2AQ7L0J3 742 aa3.09□□□□□ -1.91
RNU6-478P-201ENST00000363904 TTC13Q8NBP0 860 aa3.09□□□□□ -1.91
RNU6-478P-201ENST00000363904 BMP2P12643 396 aa3.08□□□□□ -1.92
RNU6-478P-201ENST00000363904 WDR4P57081 412 aaKnown RBP3.08□□□□□ -1.92
RNU6-478P-201ENST00000363904 RSPH4AQ5TD94 716 aa3.08□□□□□ -1.92
RNU6-478P-201ENST00000363904 VWA5B2Q8N398 1253 aa3.08□□□□□ -1.92
RNU6-478P-201ENST00000363904 THAP11Q96EK4 314 aa3.08□□□□□ -1.92
RNU6-478P-201ENST00000363904 TMEM134Q9H6X4 195 aa3.08□□□□□ -1.92
RNU6-478P-201ENST00000363904 CDHR5Q9HBB8 845 aa3.08□□□□□ -1.92
RNU6-478P-201ENST00000363904 SIAH2O43255 324 aa3.07□□□□□ -1.92
RNU6-478P-201ENST00000363904 SLC10A3P09131 477 aa3.07□□□□□ -1.92
RNU6-478P-201ENST00000363904 PTSQ03393 145 aa3.07□□□□□ -1.92
RNU6-478P-201ENST00000363904 DOC2BQ14184 412 aa3.07□□□□□ -1.92
RNU6-478P-201ENST00000363904 FOXD4L6Q3SYB3 417 aaPredicted RBP3.07□□□□□ -1.92
RNU6-478P-201ENST00000363904 FOXD4L3Q6VB84 417 aaPredicted RBP3.07□□□□□ -1.92
RNU6-478P-201ENST00000363904 SH3RF1Q7Z6J0 888 aa3.07□□□□□ -1.92
RNU6-478P-201ENST00000363904 CCDC24Q8N4L8 307 aa3.07□□□□□ -1.92
RNU6-478P-201ENST00000363904 ADH1CP00326 375 aa3.06□□□□□ -1.92
RNU6-478P-201ENST00000363904 NNTQ13423 1086 aa3.06□□□□□ -1.92
RNU6-478P-201ENST00000363904 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.06□□□□□ -1.92
RNU6-478P-201ENST00000363904 MSS51Q4VC12 460 aa3.06□□□□□ -1.92
RNU6-478P-201ENST00000363904 DNMT3LQ9UJW3 386 aa3.06□□□□□ -1.92
RNU6-478P-201ENST00000363904 GRXCR2A6NFK2 248 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms