RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 HSP90AB3PQ58FF7 597 aa10.04□□□□□ -0.8
CTNND1-202ENST00000361332 RBM5P52756 815 aaKnown RBP eCLIP10.04□□□□□ -0.8
CTNND1-202ENST00000361332 CDK5RAP3Q96JB5 506 aa10.04□□□□□ -0.8
CTNND1-202ENST00000361332 BRMS1Q9HCU9 246 aa10.04□□□□□ -0.8
CTNND1-202ENST00000361332 FMN1Q68DA7 1419 aa10.04□□□□□ -0.8
CTNND1-202ENST00000361332 TTLL5Q6EMB2 1281 aa10.04□□□□□ -0.8
CTNND1-202ENST00000361332 PDE3BQ13370 1112 aa10.04□□□□□ -0.8
CTNND1-202ENST00000361332 CA8P35219 290 aa10.04□□□□□ -0.8
CTNND1-202ENST00000361332 EIF4G1Q04637 1599 aaKnown RBP10.03□□□□□ -0.8
CTNND1-202ENST00000361332 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
CTNND1-202ENST00000361332 NECTIN2Q92692 538 aa10.03□□□□□ -0.8
CTNND1-202ENST00000361332 CCDC39Q9UFE4 941 aa10.03□□□□□ -0.8
CTNND1-202ENST00000361332 CENPJQ9HC77 1338 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-202ENST00000361332 CBX1P83916 185 aa10.03□□□□□ -0.8
CTNND1-202ENST00000361332 IFIT2P09913 472 aaKnown RBP10.02□□□□□ -0.8
CTNND1-202ENST00000361332 BICD2Q8TD16 824 aa10.02□□□□□ -0.8
CTNND1-202ENST00000361332 NASPP49321 788 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-202ENST00000361332 ENOX2Q16206 610 aaKnown RBP10.02□□□□□ -0.81
CTNND1-202ENST00000361332 EZRP15311 586 aaKnown RBP10.02□□□□□ -0.81
CTNND1-202ENST00000361332 EXOC6Q8TAG9 804 aa10.02□□□□□ -0.81
CTNND1-202ENST00000361332 PSMD1Q99460 953 aa10.02□□□□□ -0.81
CTNND1-202ENST00000361332 WASHC4Q2M389 1173 aa10.01□□□□□ -0.81
CTNND1-202ENST00000361332 ELL2O00472 640 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-202ENST00000361332 RSPH4AQ5TD94 716 aa10.01□□□□□ -0.81
CTNND1-202ENST00000361332 DHX37Q8IY37 1157 aaKnown RBP10.01□□□□□ -0.81
CTNND1-202ENST00000361332 SCLT1Q96NL6 688 aa10.01□□□□□ -0.81
CTNND1-202ENST00000361332 MAPK8IP2Q13387 824 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-202ENST00000361332 PDILTQ8N807 584 aa10.01□□□□□ -0.81
CTNND1-202ENST00000361332 DESP17661 470 aa10□□□□□ -0.81
CTNND1-202ENST00000361332 LEKR1Q6ZMV7 388 aa10□□□□□ -0.81
CTNND1-202ENST00000361332 PSME1Q06323 249 aa10□□□□□ -0.81
CTNND1-202ENST00000361332 ZKSCAN1P17029 563 aaPredicted RBP10□□□□□ -0.81
CTNND1-202ENST00000361332 TRIM21P19474 475 aaKnown RBP10□□□□□ -0.81
CTNND1-202ENST00000361332 NEUROD6Q96NK8 337 aa10□□□□□ -0.81
CTNND1-202ENST00000361332 ZHX3Q9H4I2 956 aa10□□□□□ -0.81
CTNND1-202ENST00000361332 RRP9O43818 475 aaKnown RBP9.99□□□□□ -0.81
CTNND1-202ENST00000361332 RUFY2Q8WXA3 655 aa9.99□□□□□ -0.81
CTNND1-202ENST00000361332 ANKRD45Q5TZF3 282 aa9.99□□□□□ -0.81
CTNND1-202ENST00000361332 PRKRIP1Q9H875 184 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-202ENST00000361332 XBP1P17861 261 aa9.99□□□□□ -0.81
CTNND1-202ENST00000361332 ROCK2O75116 1388 aaKnown RBP9.99□□□□□ -0.81
CTNND1-202ENST00000361332 TTLL12Q14166 644 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-202ENST00000361332 SASS6Q6UVJ0 657 aa9.98□□□□□ -0.81
CTNND1-202ENST00000361332 RALYLQ86SE5 291 aaKnown RBP9.98□□□□□ -0.81
CTNND1-202ENST00000361332 CCDC146Q8IYE0 955 aa9.98□□□□□ -0.81
CTNND1-202ENST00000361332 TSPYL1Q9H0U9 437 aa9.98□□□□□ -0.81
CTNND1-202ENST00000361332 NUTM2BA6NNL0 878 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-202ENST00000361332 NUTM2EB1AL46 878 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-202ENST00000361332 G3BP1Q13283 466 aaKnown RBP eCLIP9.98□□□□□ -0.818e-9■□□□□ 11.1
CTNND1-202ENST00000361332 NUTM2AQ8IVF1 878 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-202ENST00000361332 ZBED9Q6R2W3 1325 aa9.98□□□□□ -0.81
CTNND1-202ENST00000361332 DDX58O95786 925 aaKnown RBP9.98□□□□□ -0.81
CTNND1-202ENST00000361332 ERCC4Q92889 916 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-202ENST00000361332 FHOD3Q2V2M9 1422 aa9.98□□□□□ -0.81
CTNND1-202ENST00000361332 CRBNQ96SW2 442 aa9.97□□□□□ -0.81
CTNND1-202ENST00000361332 COMMD10Q9Y6G5 202 aa9.97□□□□□ -0.81
CTNND1-202ENST00000361332 ATF3P18847 181 aa9.97□□□□□ -0.81
CTNND1-202ENST00000361332 RRP1P56182 461 aaKnown RBP9.97□□□□□ -0.81
CTNND1-202ENST00000361332 DRC1Q96MC2 740 aa9.97□□□□□ -0.81
CTNND1-202ENST00000361332 NUCB2P80303 420 aa9.97□□□□□ -0.81
CTNND1-202ENST00000361332 OLFM4Q6UX06 510 aa9.97□□□□□ -0.81
CTNND1-202ENST00000361332 NLRP13Q86W25 1043 aa9.97□□□□□ -0.81
CTNND1-202ENST00000361332 ATP2B1P20020 1258 aa9.96□□□□□ -0.81
CTNND1-202ENST00000361332 RNF214Q8ND24 703 aa9.96□□□□□ -0.81
CTNND1-202ENST00000361332 HOMER2Q9NSB8 354 aa9.96□□□□□ -0.81
CTNND1-202ENST00000361332 MAGEC2Q9UBF1 373 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-202ENST00000361332 ZSCAN29Q8IWY8 852 aaPredicted RBP9.96□□□□□ -0.82
CTNND1-202ENST00000361332 NUP155O75694 1391 aa9.96□□□□□ -0.82
CTNND1-202ENST00000361332 GRM1Q13255 1194 aa9.96□□□□□ -0.82
CTNND1-202ENST00000361332 WDR78Q5VTH9 848 aa9.96□□□□□ -0.82
CTNND1-202ENST00000361332 ERLIN2O94905 339 aa9.95□□□□□ -0.82
CTNND1-202ENST00000361332 SLC3A2P08195 630 aaKnown RBP9.95□□□□□ -0.82
CTNND1-202ENST00000361332 TRAK2O60296 914 aa9.95□□□□□ -0.82
CTNND1-202ENST00000361332 SSR1P43307 286 aaKnown RBP9.95□□□□□ -0.82
CTNND1-202ENST00000361332 RNF20Q5VTR2 975 aa9.95□□□□□ -0.82
CTNND1-202ENST00000361332 TAX1BP1Q86VP1 789 aa9.95□□□□□ -0.82
CTNND1-202ENST00000361332 CCDC112Q8NEF3 446 aa9.95□□□□□ -0.82
CTNND1-202ENST00000361332 COG3Q96JB2 828 aa9.95□□□□□ -0.82
CTNND1-202ENST00000361332 AIMP1Q12904 312 aaKnown RBP9.95□□□□□ -0.82
CTNND1-202ENST00000361332 VPS37CA5D8V6 355 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-202ENST00000361332 TTC16Q8NEE8 873 aa9.95□□□□□ -0.82
CTNND1-202ENST00000361332 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
CTNND1-202ENST00000361332 SMARCA2P51531 1590 aa9.94□□□□□ -0.82
CTNND1-202ENST00000361332 DEF6Q9H4E7 631 aa9.94□□□□□ -0.82
CTNND1-202ENST00000361332 GBP2P32456 591 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-202ENST00000361332 BRPF1P55201 1214 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-202ENST00000361332 WASHC2CQ9Y4E1 1318 aa9.94□□□□□ -0.82
CTNND1-202ENST00000361332 CCDC181Q5TID7 509 aa9.94□□□□□ -0.82
CTNND1-202ENST00000361332 REC8O95072 547 aa9.94□□□□□ -0.82
CTNND1-202ENST00000361332 AXDND1Q5T1B0 1012 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-202ENST00000361332 BCCIPQ9P287 314 aaKnown RBP eCLIP9.94□□□□□ -0.821e-6■■■■□ 21.2
CTNND1-202ENST00000361332 ANAPC15P60006 121 aa9.93□□□□□ -0.82
CTNND1-202ENST00000361332 CCDC73Q6ZRK6 1079 aa9.93□□□□□ -0.82
CTNND1-202ENST00000361332 RIC3Q7Z5B4 369 aa9.93□□□□□ -0.82
CTNND1-202ENST00000361332 RAPGEF4Q8WZA2 1011 aa9.93□□□□□ -0.82
CTNND1-202ENST00000361332 DNAI2Q9GZS0 605 aa9.93□□□□□ -0.82
CTNND1-202ENST00000361332 PABPN1LA6NDY0 278 aaKnown RBP9.93□□□□□ -0.82
CTNND1-202ENST00000361332 TAF3Q5VWG9 929 aa9.93□□□□□ -0.82
CTNND1-202ENST00000361332 STK11IPQ8N1F8 1099 aa9.93□□□□□ -0.82
CTNND1-202ENST00000361332 MYBBP1AQ9BQG0 1328 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms