RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 PRG4Q92954 1404 aaPredicted RBP5.94□□□□□ -1.46
PTPN22-201ENST00000359785 CALD1Q05682 793 aaKnown RBP5.93□□□□□ -1.46
PTPN22-201ENST00000359785 CCDC184Q52MB2 194 aa5.93□□□□□ -1.46
PTPN22-201ENST00000359785 MAPK8IP3Q9UPT6 1336 aa5.93□□□□□ -1.46
PTPN22-201ENST00000359785 SSH2Q76I76 1423 aa5.93□□□□□ -1.46
PTPN22-201ENST00000359785 POTEHQ6S545 545 aa5.93□□□□□ -1.46
PTPN22-201ENST00000359785 CT47B1P0C2W7 299 aaPredicted RBP5.93□□□□□ -1.46
PTPN22-201ENST00000359785 BRPF1P55201 1214 aaPredicted RBP5.93□□□□□ -1.46
PTPN22-201ENST00000359785 FMN2Q9NZ56 1722 aa5.92□□□□□ -1.46
PTPN22-201ENST00000359785 VGFO15240 615 aaPredicted RBP5.92□□□□□ -1.46
PTPN22-201ENST00000359785 FAM161AQ3B820 660 aa5.92□□□□□ -1.46
PTPN22-201ENST00000359785 DLG5Q8TDM6 1919 aa5.92□□□□□ -1.46
PTPN22-201ENST00000359785 FAM208AQ9UK61 1670 aaKnown RBP5.92□□□□□ -1.46
PTPN22-201ENST00000359785 ATP7BP35670 1465 aa5.92□□□□□ -1.46
PTPN22-201ENST00000359785 TPM2P07951 284 aa5.92□□□□□ -1.46
PTPN22-201ENST00000359785 ERCC6L2Q5T890 1561 aa5.92□□□□□ -1.46
PTPN22-201ENST00000359785 TSPOAP1O95153 1857 aa5.92□□□□□ -1.46
PTPN22-201ENST00000359785 TRAPPC8Q9Y2L5 1435 aa5.92□□□□□ -1.46
PTPN22-201ENST00000359785 TESK2Q96S53 571 aa5.92□□□□□ -1.46
PTPN22-201ENST00000359785 DAXXQ9UER7 740 aaPredicted RBP5.92□□□□□ -1.46
PTPN22-201ENST00000359785 NEO1Q92859 1461 aa5.91□□□□□ -1.46
PTPN22-201ENST00000359785 C3P01024 1663 aa5.91□□□□□ -1.46
PTPN22-201ENST00000359785 PDE3AQ14432 1141 aa5.91□□□□□ -1.46
PTPN22-201ENST00000359785 CASZ1Q86V15 1759 aa5.91□□□□□ -1.46
PTPN22-201ENST00000359785 PPP1R9BQ96SB3 815 aa5.91□□□□□ -1.46
PTPN22-201ENST00000359785 ZNF692Q9BU19 519 aaPredicted RBP5.91□□□□□ -1.46
PTPN22-201ENST00000359785 CIZ1Q9ULV3 898 aaPredicted RBP5.91□□□□□ -1.46
PTPN22-201ENST00000359785 SIGLEC1Q9BZZ2 1709 aa5.91□□□□□ -1.46
PTPN22-201ENST00000359785 UTP14CQ5TAP6 766 aaKnown RBP5.9□□□□□ -1.46
PTPN22-201ENST00000359785 MAP7D2Q96T17 732 aa5.9□□□□□ -1.46
PTPN22-201ENST00000359785 XRN1Q8IZH2 1706 aaKnown RBP5.9□□□□□ -1.46
PTPN22-201ENST00000359785 NFKBIBQ15653 356 aa5.9□□□□□ -1.46
PTPN22-201ENST00000359785 SNX21Q969T3 373 aa5.9□□□□□ -1.46
PTPN22-201ENST00000359785 SALL2Q9Y467 1007 aaPredicted RBP5.9□□□□□ -1.46
PTPN22-201ENST00000359785 SPATA31D1Q6ZQQ2 1576 aa5.9□□□□□ -1.46
PTPN22-201ENST00000359785 NOS1P29475 1434 aa5.9□□□□□ -1.47
PTPN22-201ENST00000359785 RTL5Q5HYW3 569 aaPredicted RBP5.9□□□□□ -1.47
PTPN22-201ENST00000359785 NUP155O75694 1391 aa5.9□□□□□ -1.47
PTPN22-201ENST00000359785 HSP90AB1P08238 724 aaKnown RBP5.89□□□□□ -1.47
PTPN22-201ENST00000359785 RCAN3Q9UKA8 241 aa5.89□□□□□ -1.47
PTPN22-201ENST00000359785 PLCH2O75038 1416 aa5.89□□□□□ -1.47
PTPN22-201ENST00000359785 FAM193AP78312 1265 aa5.89□□□□□ -1.47
PTPN22-201ENST00000359785 MTERF4Q7Z6M4 381 aaKnown RBP5.89□□□□□ -1.47
PTPN22-201ENST00000359785 TRIM52Q96A61 297 aa5.89□□□□□ -1.47
PTPN22-201ENST00000359785 CHMP7Q8WUX9 453 aaPredicted RBP5.89□□□□□ -1.47
PTPN22-201ENST00000359785 JPH4Q96JJ6 628 aa5.89□□□□□ -1.47
PTPN22-201ENST00000359785 ANO8Q9HCE9 1232 aaPredicted RBP5.89□□□□□ -1.47
PTPN22-201ENST00000359785 ADAMTS7Q9UKP4 1686 aa5.89□□□□□ -1.47
PTPN22-201ENST00000359785 RICTORQ6R327 1708 aa5.89□□□□□ -1.47
PTPN22-201ENST00000359785 PARP4Q9UKK3 1724 aaKnown RBP5.89□□□□□ -1.47
PTPN22-201ENST00000359785 MRS2Q9HD23 443 aa5.88□□□□□ -1.47
PTPN22-201ENST00000359785 CAMTA1Q9Y6Y1 1673 aa5.88□□□□□ -1.47
PTPN22-201ENST00000359785 DUSP27Q5VZP5 1158 aa5.88□□□□□ -1.47
PTPN22-201ENST00000359785 PTCH1Q13635 1447 aa5.88□□□□□ -1.47
PTPN22-201ENST00000359785 EIF5BO60841 1220 aaKnown RBP5.88□□□□□ -1.47
PTPN22-201ENST00000359785 MCM5P33992 734 aa5.88□□□□□ -1.47
PTPN22-201ENST00000359785 MARF1Q9Y4F3 1742 aaKnown RBP5.87□□□□□ -1.47
PTPN22-201ENST00000359785 PIK3C2AO00443 1686 aa5.87□□□□□ -1.47
PTPN22-201ENST00000359785 GTF2F1P35269 517 aaKnown RBP eCLIP5.86□□□□□ -1.47
PTPN22-201ENST00000359785 TBC1D32Q96NH3 1257 aa5.86□□□□□ -1.47
PTPN22-201ENST00000359785 ARHGAP5Q13017 1502 aa5.86□□□□□ -1.47
PTPN22-201ENST00000359785 DIP2BQ9P265 1576 aa5.86□□□□□ -1.47
PTPN22-201ENST00000359785 GLIPR1L2Q4G1C9 344 aa5.86□□□□□ -1.47
PTPN22-201ENST00000359785 B4GALNT3Q6L9W6 998 aa5.86□□□□□ -1.47
PTPN22-201ENST00000359785 TULP4Q9NRJ4 1543 aa5.86□□□□□ -1.47
PTPN22-201ENST00000359785 DISP3Q9P2K9 1392 aa5.86□□□□□ -1.47
PTPN22-201ENST00000359785 AGLP35573 1532 aa5.86□□□□□ -1.47
PTPN22-201ENST00000359785 PDLIM2Q96JY6 352 aa5.86□□□□□ -1.47
PTPN22-201ENST00000359785 KIF13AQ9H1H9 1805 aa5.86□□□□□ -1.47
PTPN22-201ENST00000359785 ZNF500O60304 480 aaPredicted RBP5.85□□□□□ -1.47
PTPN22-201ENST00000359785 RBM25P49756 843 aaKnown RBP5.85□□□□□ -1.47
PTPN22-201ENST00000359785 SLFN5Q08AF3 891 aa5.85□□□□□ -1.47
PTPN22-201ENST00000359785 PDCL3Q9H2J4 239 aa5.85□□□□□ -1.47
PTPN22-201ENST00000359785 PRDM4Q9UKN5 801 aa5.85□□□□□ -1.47
PTPN22-201ENST00000359785 ABCC11Q96J66 1382 aa5.85□□□□□ -1.47
PTPN22-201ENST00000359785 IL16Q14005 1332 aa5.85□□□□□ -1.47
PTPN22-201ENST00000359785 ANKRD36BQ8N2N9 1353 aa5.85□□□□□ -1.47
PTPN22-201ENST00000359785 MLH3Q9UHC1 1453 aa5.84□□□□□ -1.47
PTPN22-201ENST00000359785 EPB41L2O43491 1005 aaKnown RBP5.84□□□□□ -1.47
PTPN22-201ENST00000359785 SLC20A2Q08357 652 aa5.84□□□□□ -1.47
PTPN22-201ENST00000359785 SMC5Q8IY18 1101 aa5.84□□□□□ -1.47
PTPN22-201ENST00000359785 SMAP1Q8IYB5 467 aaPredicted RBP5.84□□□□□ -1.47
PTPN22-201ENST00000359785 RAD50Q92878 1312 aa5.84□□□□□ -1.47
PTPN22-201ENST00000359785 ABCC6O95255 1503 aa5.84□□□□□ -1.47
PTPN22-201ENST00000359785 ITGAEP38570 1179 aa5.84□□□□□ -1.47
PTPN22-201ENST00000359785 AK9Q5TCS8 1911 aa5.84□□□□□ -1.48
PTPN22-201ENST00000359785 MRE11P49959 708 aa5.84□□□□□ -1.48
PTPN22-201ENST00000359785 AMER1Q5JTC6 1135 aaPredicted RBP5.84□□□□□ -1.48
PTPN22-201ENST00000359785 FRAT1Q92837 279 aaPredicted RBP5.84□□□□□ -1.48
PTPN22-201ENST00000359785 PNPLA6Q8IY17 1366 aa5.83□□□□□ -1.48
PTPN22-201ENST00000359785 RTL1A6NKG5 1358 aa5.83□□□□□ -1.48
PTPN22-201ENST00000359785 NEFMP07197 916 aa5.83□□□□□ -1.48
PTPN22-201ENST00000359785 CPSF1Q10570 1443 aaKnown RBP5.83□□□□□ -1.48
PTPN22-201ENST00000359785 RIMS2Q9UQ26 1411 aa5.83□□□□□ -1.48
PTPN22-201ENST00000359785 SIPA1L3O60292 1781 aaPredicted RBP5.83□□□□□ -1.48
PTPN22-201ENST00000359785 HDAC1Q13547 482 aaPredicted RBP5.83□□□□□ -1.48
PTPN22-201ENST00000359785 DCAF11Q8TEB1 546 aa5.83□□□□□ -1.48
PTPN22-201ENST00000359785 PKNOX2Q96KN3 472 aa5.82□□□□□ -1.48
PTPN22-201ENST00000359785 CPS1P31327 1500 aa5.82□□□□□ -1.48
PTPN22-201ENST00000359785 PXDNLA1KZ92 1463 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms