RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 LRPPRCP42704 1394 aaKnown RBP18.43■□□□□ 0.54
CCDC197-201ENST00000359253 ABCC11Q96J66 1382 aa18.43■□□□□ 0.54
CCDC197-201ENST00000359253 NRXN3Q9Y4C0 1643 aa18.43■□□□□ 0.54
CCDC197-201ENST00000359253 PER1O15534 1290 aaPredicted RBP18.43■□□□□ 0.54
CCDC197-201ENST00000359253 CHD2O14647 1828 aaKnown RBP18.43■□□□□ 0.54
CCDC197-201ENST00000359253 NKTRP30414 1462 aaKnown RBP18.43■□□□□ 0.54
CCDC197-201ENST00000359253 QRICH2Q9H0J4 1663 aa18.43■□□□□ 0.54
CCDC197-201ENST00000359253 EVC2Q86UK5 1308 aa18.43■□□□□ 0.54
CCDC197-201ENST00000359253 FBXO41Q8TF61 875 aa18.42■□□□□ 0.54
CCDC197-201ENST00000359253 LRRC7Q96NW7 1537 aa18.42■□□□□ 0.54
CCDC197-201ENST00000359253 PANK3Q9H999 370 aa18.41■□□□□ 0.54
CCDC197-201ENST00000359253 SETD1AO15047 1707 aaKnown RBP18.4■□□□□ 0.54
CCDC197-201ENST00000359253 NWD1Q149M9 1564 aa18.4■□□□□ 0.54
CCDC197-201ENST00000359253 TOM1O60784 492 aa18.4■□□□□ 0.54
CCDC197-201ENST00000359253 PTPRUQ92729 1446 aa18.4■□□□□ 0.54
CCDC197-201ENST00000359253 NPC1L1Q9UHC9 1359 aa18.39■□□□□ 0.53
CCDC197-201ENST00000359253 NINLQ9Y2I6 1382 aa18.39■□□□□ 0.53
CCDC197-201ENST00000359253 STRCP1A6NGW2 1772 aa18.38■□□□□ 0.53
CCDC197-201ENST00000359253 POGKQ9P215 609 aa18.38■□□□□ 0.53
CCDC197-201ENST00000359253 TMEM94Q12767 1356 aa18.38■□□□□ 0.53
CCDC197-201ENST00000359253 C19orf44Q9H6X5 657 aa18.37■□□□□ 0.53
CCDC197-201ENST00000359253 KNSTRNQ9Y448 316 aa18.37■□□□□ 0.53
CCDC197-201ENST00000359253 TECPR2O15040 1411 aa18.37■□□□□ 0.53
CCDC197-201ENST00000359253 FAM135BQ49AJ0 1406 aa18.37■□□□□ 0.53
CCDC197-201ENST00000359253 YTHDC1Q96MU7 727 aaKnown RBP18.36■□□□□ 0.53
CCDC197-201ENST00000359253 STK26Q9P289 416 aa18.36■□□□□ 0.53
CCDC197-201ENST00000359253 MYBBP1AQ9BQG0 1328 aaKnown RBP18.35■□□□□ 0.53
CCDC197-201ENST00000359253 KNDC1Q76NI1 1749 aa18.35■□□□□ 0.53
CCDC197-201ENST00000359253 PARD3Q8TEW0 1356 aa18.34■□□□□ 0.53
CCDC197-201ENST00000359253 PRAM1Q96QH2 718 aa18.34■□□□□ 0.53
CCDC197-201ENST00000359253 MYOM1P52179 1685 aa18.34■□□□□ 0.53
CCDC197-201ENST00000359253 ATAD2Q6PL18 1390 aa18.33■□□□□ 0.53
CCDC197-201ENST00000359253 UBAP1LF5GYI3 381 aa18.33■□□□□ 0.52
CCDC197-201ENST00000359253 PTCH1Q13635 1447 aa18.32■□□□□ 0.52
CCDC197-201ENST00000359253 BRD4O60885 1362 aaPredicted RBP18.32■□□□□ 0.52
CCDC197-201ENST00000359253 MSH6P52701 1360 aa18.32■□□□□ 0.52
CCDC197-201ENST00000359253 CADPS2Q86UW7 1296 aa18.32■□□□□ 0.52
CCDC197-201ENST00000359253 MRS2Q9HD23 443 aa18.32■□□□□ 0.52
CCDC197-201ENST00000359253 TULP4Q9NRJ4 1543 aa18.3■□□□□ 0.52
CCDC197-201ENST00000359253 XRN1Q8IZH2 1706 aaKnown RBP18.3■□□□□ 0.52
CCDC197-201ENST00000359253 C14orf37Q86TY3 774 aa18.3■□□□□ 0.52
CCDC197-201ENST00000359253 NLRP13Q86W25 1043 aa18.3■□□□□ 0.52
CCDC197-201ENST00000359253 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
CCDC197-201ENST00000359253 ROBO2Q9HCK4 1378 aa18.29■□□□□ 0.52
CCDC197-201ENST00000359253 ATF3P18847 181 aa18.28■□□□□ 0.52
CCDC197-201ENST00000359253 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
CCDC197-201ENST00000359253 SLAIN2Q9P270 581 aa18.27■□□□□ 0.52
CCDC197-201ENST00000359253 DCCP43146 1447 aa18.26■□□□□ 0.51
CCDC197-201ENST00000359253 SRPK2P78362 688 aaKnown RBP18.26■□□□□ 0.51
CCDC197-201ENST00000359253 TMC1Q8TDI8 760 aa18.26■□□□□ 0.51
CCDC197-201ENST00000359253 ANKRD36BQ8N2N9 1353 aa18.26■□□□□ 0.51
CCDC197-201ENST00000359253 WAPLQ7Z5K2 1190 aa18.25■□□□□ 0.51
CCDC197-201ENST00000359253 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
CCDC197-201ENST00000359253 XIRP1Q702N8 1843 aaKnown RBP18.24■□□□□ 0.51
CCDC197-201ENST00000359253 ILDR1Q86SU0 546 aaPredicted RBP18.24■□□□□ 0.51
CCDC197-201ENST00000359253 CDK19Q9BWU1 502 aa18.24■□□□□ 0.51
CCDC197-201ENST00000359253 SAFB2Q14151 953 aaKnown RBP eCLIP18.23■□□□□ 0.51
CCDC197-201ENST00000359253 TERF2IPQ9NYB0 399 aa18.23■□□□□ 0.51
CCDC197-201ENST00000359253 USP32Q8NFA0 1604 aa18.23■□□□□ 0.51
CCDC197-201ENST00000359253 ADGRL3Q9HAR2 1447 aa18.23■□□□□ 0.51
CCDC197-201ENST00000359253 NSD2O96028 1365 aa18.22■□□□□ 0.51
CCDC197-201ENST00000359253 CC2D1BQ5T0F9 858 aaKnown RBP18.22■□□□□ 0.51
CCDC197-201ENST00000359253 SLC12A5Q9H2X9 1139 aa18.22■□□□□ 0.51
CCDC197-201ENST00000359253 CABP2Q9NPB3 220 aa18.22■□□□□ 0.51
CCDC197-201ENST00000359253 INSRP06213 1382 aa18.21■□□□□ 0.51
CCDC197-201ENST00000359253 WASLO00401 505 aaPredicted RBP18.21■□□□□ 0.51
CCDC197-201ENST00000359253 CCDC184Q52MB2 194 aa18.2■□□□□ 0.5
CCDC197-201ENST00000359253 CARD14Q9BXL6 1004 aa18.2■□□□□ 0.5
CCDC197-201ENST00000359253 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
CCDC197-201ENST00000359253 ADGRB2O60241 1585 aa18.19■□□□□ 0.5
CCDC197-201ENST00000359253 PIP4K2BP78356 416 aa18.19■□□□□ 0.5
CCDC197-201ENST00000359253 HDGFL2Q7Z4V5 671 aaPredicted RBP18.19■□□□□ 0.5
CCDC197-201ENST00000359253 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
CCDC197-201ENST00000359253 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
CCDC197-201ENST00000359253 NSD3Q9BZ95 1437 aa18.18■□□□□ 0.5
CCDC197-201ENST00000359253 FAM9BQ8IZU0 186 aa18.17■□□□□ 0.5
CCDC197-201ENST00000359253 ATP7BP35670 1465 aa18.17■□□□□ 0.5
CCDC197-201ENST00000359253 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.17■□□□□ 0.5
CCDC197-201ENST00000359253 PPP2R1AP30153 589 aa18.15■□□□□ 0.5
CCDC197-201ENST00000359253 CNGB1Q14028 1251 aaPredicted RBP18.15■□□□□ 0.5
CCDC197-201ENST00000359253 SCAF1Q9H7N4 1312 aaKnown RBP18.15■□□□□ 0.5
CCDC197-201ENST00000359253 CCDC61Q9Y6R9 512 aa18.14■□□□□ 0.49
CCDC197-201ENST00000359253 HNRNPUQ00839 825 aaKnown RBP eCLIP18.13■□□□□ 0.49
CCDC197-201ENST00000359253 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
CCDC197-201ENST00000359253 A0A1W2PP64 1363 aa18.12■□□□□ 0.49
CCDC197-201ENST00000359253 MST1RQ04912 1400 aa18.12■□□□□ 0.49
CCDC197-201ENST00000359253 MORC1Q86VD1 984 aa18.11■□□□□ 0.49
CCDC197-201ENST00000359253 NUDT16Q96DE0 195 aaKnown RBP18.11■□□□□ 0.49
CCDC197-201ENST00000359253 CABP1Q9NZU7 370 aa18.11■□□□□ 0.49
CCDC197-201ENST00000359253 C1orf167Q5SNV9 1468 aa18.1■□□□□ 0.49
CCDC197-201ENST00000359253 CD163L1Q9NR16 1453 aa18.1■□□□□ 0.49
CCDC197-201ENST00000359253 ZBED9Q6R2W3 1325 aa18.1■□□□□ 0.49
CCDC197-201ENST00000359253 BRINP3Q76B58 766 aa18.1■□□□□ 0.49
CCDC197-201ENST00000359253 CDC42BPGQ6DT37 1551 aa18.09■□□□□ 0.49
CCDC197-201ENST00000359253 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
CCDC197-201ENST00000359253 CPSF1Q10570 1443 aaKnown RBP18.08■□□□□ 0.49
CCDC197-201ENST00000359253 PPIP5K1Q6PFW1 1433 aa18.08■□□□□ 0.49
CCDC197-201ENST00000359253 PLEKHG3A1L390 1219 aa18.07■□□□□ 0.48
CCDC197-201ENST00000359253 HSPA1LP34931 641 aa18.07■□□□□ 0.48
CCDC197-201ENST00000359253 ESCO1Q5FWF5 840 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms