RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 WWC2Q6AWC2 1192 aa15.79■□□□□ 0.12
NLRC3-202ENST00000359128 MTMR7Q9Y216 660 aa15.79■□□□□ 0.12
NLRC3-202ENST00000359128 COG6Q9Y2V7 657 aa15.78■□□□□ 0.12
NLRC3-202ENST00000359128 RALYLQ86SE5 291 aaKnown RBP15.78■□□□□ 0.12
NLRC3-202ENST00000359128 THEMISQ8N1K5 641 aaPredicted RBP15.78■□□□□ 0.12
NLRC3-202ENST00000359128 TATP17735 454 aaPredicted RBP15.78■□□□□ 0.12
NLRC3-202ENST00000359128 TMEM132AQ24JP5 1023 aa15.78■□□□□ 0.12
NLRC3-202ENST00000359128 RBM19Q9Y4C8 960 aaKnown RBP15.78■□□□□ 0.12
NLRC3-202ENST00000359128 ARID3AQ99856 593 aa15.77■□□□□ 0.12
NLRC3-202ENST00000359128 DZIP1LQ8IYY4 767 aaKnown RBP15.77■□□□□ 0.11
NLRC3-202ENST00000359128 GGNBP2Q9H3C7 697 aa15.77■□□□□ 0.11
NLRC3-202ENST00000359128 FBXO3Q9UK99 471 aa15.77■□□□□ 0.11
NLRC3-202ENST00000359128 TBC1D2BQ9UPU7 963 aa15.76■□□□□ 0.11
NLRC3-202ENST00000359128 STAC3Q96MF2 364 aa15.76■□□□□ 0.11
NLRC3-202ENST00000359128 DEKP35659 375 aaKnown RBP15.76■□□□□ 0.11
NLRC3-202ENST00000359128 FOSBP53539 338 aa15.76■□□□□ 0.11
NLRC3-202ENST00000359128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.76■□□□□ 0.11
NLRC3-202ENST00000359128 IPO7O95373 1038 aaKnown RBP15.75■□□□□ 0.11
NLRC3-202ENST00000359128 UBTFL1P0CB47 393 aaPredicted RBP15.75■□□□□ 0.11
NLRC3-202ENST00000359128 TOM1L2Q6ZVM7 507 aa15.75■□□□□ 0.11
NLRC3-202ENST00000359128 RRBP1Q9P2E9 1410 aaKnown RBP15.75■□□□□ 0.11
NLRC3-202ENST00000359128 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
NLRC3-202ENST00000359128 TMEM132EQ6IEE7 984 aa15.75■□□□□ 0.11
NLRC3-202ENST00000359128 CCAR2Q8N163 923 aaKnown RBP15.75■□□□□ 0.11
NLRC3-202ENST00000359128 GAS2L2Q8NHY3 880 aa15.75■□□□□ 0.11
NLRC3-202ENST00000359128 CRBNQ96SW2 442 aa15.75■□□□□ 0.11
NLRC3-202ENST00000359128 SLC3A2P08195 630 aaKnown RBP15.75■□□□□ 0.11
NLRC3-202ENST00000359128 NINLQ9Y2I6 1382 aa15.75■□□□□ 0.11
NLRC3-202ENST00000359128 SLC4A3P48751 1232 aa15.74■□□□□ 0.11
NLRC3-202ENST00000359128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.74■□□□□ 0.11
NLRC3-202ENST00000359128 XBP1P17861 261 aa15.74■□□□□ 0.11
NLRC3-202ENST00000359128 SYNJ2O15056 1496 aa15.74■□□□□ 0.11
NLRC3-202ENST00000359128 CABP4P57796 275 aa15.74■□□□□ 0.11
NLRC3-202ENST00000359128 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
NLRC3-202ENST00000359128 ODF2Q5BJF6 829 aa15.73■□□□□ 0.11
NLRC3-202ENST00000359128 CCDC30Q5VVM6 783 aa15.73■□□□□ 0.11
NLRC3-202ENST00000359128 CT47A1Q5JQC4 288 aaPredicted RBP15.72■□□□□ 0.11
NLRC3-202ENST00000359128 BICD2Q8TD16 824 aa15.72■□□□□ 0.11
NLRC3-202ENST00000359128 FAM161AQ3B820 660 aa15.72■□□□□ 0.11
NLRC3-202ENST00000359128 RRP1P56182 461 aaKnown RBP15.72■□□□□ 0.11
NLRC3-202ENST00000359128 EPS15P42566 896 aa15.72■□□□□ 0.11
NLRC3-202ENST00000359128 GNL3LQ9NVN8 582 aaKnown RBP15.72■□□□□ 0.11
NLRC3-202ENST00000359128 INTS3Q68E01 1043 aaKnown RBP15.72■□□□□ 0.11
NLRC3-202ENST00000359128 CNNM1Q9NRU3 951 aa15.72■□□□□ 0.11
NLRC3-202ENST00000359128 PRG4Q92954 1404 aaPredicted RBP15.72■□□□□ 0.11
NLRC3-202ENST00000359128 ANKLE2Q86XL3 938 aa15.71■□□□□ 0.11
NLRC3-202ENST00000359128 DDX54Q8TDD1 881 aaKnown RBP15.71■□□□□ 0.11
NLRC3-202ENST00000359128 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
NLRC3-202ENST00000359128 TTC39AQ5SRH9 613 aa15.71■□□□□ 0.11
NLRC3-202ENST00000359128 SART3Q15020 963 aaKnown RBP15.71■□□□□ 0.1
NLRC3-202ENST00000359128 IPO9Q96P70 1041 aaKnown RBP15.71■□□□□ 0.1
NLRC3-202ENST00000359128 DDX49Q9Y6V7 483 aaKnown RBP15.7■□□□□ 0.1
NLRC3-202ENST00000359128 SPG7Q9UQ90 795 aa15.7■□□□□ 0.1
NLRC3-202ENST00000359128 SMC3Q9UQE7 1217 aa15.69■□□□□ 0.1
NLRC3-202ENST00000359128 ZNF644Q9H582 1327 aaPredicted RBP15.69■□□□□ 0.1
NLRC3-202ENST00000359128 RBM5P52756 815 aaKnown RBP eCLIP15.69■□□□□ 0.1
NLRC3-202ENST00000359128 CNTROBQ8N137 903 aa15.69■□□□□ 0.1
NLRC3-202ENST00000359128 SKOR2Q2VWA4 1001 aaPredicted RBP15.69■□□□□ 0.1
NLRC3-202ENST00000359128 DNAJC2Q99543 621 aaKnown RBP15.69■□□□□ 0.1
NLRC3-202ENST00000359128 VPS37CA5D8V6 355 aaPredicted RBP15.68■□□□□ 0.1
NLRC3-202ENST00000359128 PRAM1Q96QH2 718 aa15.68■□□□□ 0.1
NLRC3-202ENST00000359128 KDM4AO75164 1064 aa15.68■□□□□ 0.1
NLRC3-202ENST00000359128 FSD1Q9BTV5 496 aa15.68■□□□□ 0.1
NLRC3-202ENST00000359128 NAP1L1P55209 391 aaKnown RBP15.67■□□□□ 0.1
NLRC3-202ENST00000359128 ANKRD50Q9ULJ7 1429 aa15.67■□□□□ 0.1
NLRC3-202ENST00000359128 ATP2B2Q01814 1243 aa15.67■□□□□ 0.1
NLRC3-202ENST00000359128 AFAP1Q8N556 730 aa15.67■□□□□ 0.1
NLRC3-202ENST00000359128 EXOC6Q8TAG9 804 aa15.66■□□□□ 0.1
NLRC3-202ENST00000359128 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
NLRC3-202ENST00000359128 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
NLRC3-202ENST00000359128 HMGB2P26583 209 aaKnown RBP15.66■□□□□ 0.1
NLRC3-202ENST00000359128 CCDC158Q5M9N0 1113 aa15.66■□□□□ 0.1
NLRC3-202ENST00000359128 PRKRIP1Q9H875 184 aaPredicted RBP15.66■□□□□ 0.1
NLRC3-202ENST00000359128 PSMA5P28066 241 aa15.66■□□□□ 0.1
NLRC3-202ENST00000359128 ZFYVE27Q5T4F4 411 aa15.65■□□□□ 0.1
NLRC3-202ENST00000359128 CDK5RAP3Q96JB5 506 aa15.65■□□□□ 0.1
NLRC3-202ENST00000359128 IGF1RP08069 1367 aa15.64■□□□□ 0.09
NLRC3-202ENST00000359128 FGD6Q6ZV73 1430 aa15.64■□□□□ 0.09
NLRC3-202ENST00000359128 TNNT3P45378 269 aaPredicted RBP15.64■□□□□ 0.09
NLRC3-202ENST00000359128 RRP12Q5JTH9 1297 aaKnown RBP15.64■□□□□ 0.09
NLRC3-202ENST00000359128 SASS6Q6UVJ0 657 aa15.64■□□□□ 0.09
NLRC3-202ENST00000359128 CDK19Q9BWU1 502 aa15.63■□□□□ 0.09
NLRC3-202ENST00000359128 CCDC73Q6ZRK6 1079 aa15.63■□□□□ 0.09
NLRC3-202ENST00000359128 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.63■□□□□ 0.09
NLRC3-202ENST00000359128 GPS2Q13227 327 aa15.63■□□□□ 0.09
NLRC3-202ENST00000359128 ERC1Q8IUD2 1116 aa15.62■□□□□ 0.09
NLRC3-202ENST00000359128 CLASRPQ8N2M8 674 aaKnown RBP15.62■□□□□ 0.09
NLRC3-202ENST00000359128 PAF1Q8N7H5 531 aa15.62■□□□□ 0.09
NLRC3-202ENST00000359128 GNAI3P08754 354 aa15.62■□□□□ 0.09
NLRC3-202ENST00000359128 OLFM4Q6UX06 510 aa15.62■□□□□ 0.09
NLRC3-202ENST00000359128 PRDM11Q9NQV5 511 aa15.62■□□□□ 0.09
NLRC3-202ENST00000359128 ZNF592Q92610 1267 aa15.61■□□□□ 0.09
NLRC3-202ENST00000359128 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
NLRC3-202ENST00000359128 ZBED9Q6R2W3 1325 aa15.61■□□□□ 0.09
NLRC3-202ENST00000359128 CNTLNQ9NXG0 1405 aa15.61■□□□□ 0.09
NLRC3-202ENST00000359128 PNISRQ8TF01 805 aaKnown RBP15.61■□□□□ 0.09
NLRC3-202ENST00000359128 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
NLRC3-202ENST00000359128 MTHFSP49914 203 aa15.61■□□□□ 0.09
NLRC3-202ENST00000359128 HIP1O00291 1037 aa15.61■□□□□ 0.09
NLRC3-202ENST00000359128 HSP90AB2PQ58FF8 381 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms