RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 RBM33Q96EV2 1170 aaKnown RBP12.67□□□□□ -0.38
SPTAN1-201ENST00000358161 ANKRD30BQ9BXX2 1392 aa12.67□□□□□ -0.38
SPTAN1-201ENST00000358161 RAPGEF3O95398 923 aa12.67□□□□□ -0.38
SPTAN1-201ENST00000358161 CDK13Q14004 1512 aaKnown RBP12.67□□□□□ -0.38
SPTAN1-201ENST00000358161 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
SPTAN1-201ENST00000358161 UNC13AQ9UPW8 1703 aa12.66□□□□□ -0.38
SPTAN1-201ENST00000358161 MTHFSP49914 203 aa12.66□□□□□ -0.38
SPTAN1-201ENST00000358161 CTDP1Q9Y5B0 961 aaPredicted RBP12.66□□□□□ -0.38
SPTAN1-201ENST00000358161 RNF20Q5VTR2 975 aa12.66□□□□□ -0.38
SPTAN1-201ENST00000358161 ERC2O15083 957 aa12.66□□□□□ -0.38
SPTAN1-201ENST00000358161 CDK19Q9BWU1 502 aa12.66□□□□□ -0.38
SPTAN1-201ENST00000358161 APPP05067 770 aa12.65□□□□□ -0.38
SPTAN1-201ENST00000358161 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
SPTAN1-201ENST00000358161 TRDNQ13061 729 aa12.65□□□□□ -0.38
SPTAN1-201ENST00000358161 GZF1Q9H116 711 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-201ENST00000358161 CD109Q6YHK3 1445 aa12.65□□□□□ -0.38
SPTAN1-201ENST00000358161 CCDC30Q5VVM6 783 aa12.65□□□□□ -0.38
SPTAN1-201ENST00000358161 RTEL1-TNFRSF6BF6WH68 1400 aa12.64□□□□□ -0.39
SPTAN1-201ENST00000358161 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
SPTAN1-201ENST00000358161 EXOC6Q8TAG9 804 aa12.64□□□□□ -0.39
SPTAN1-201ENST00000358161 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
SPTAN1-201ENST00000358161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
SPTAN1-201ENST00000358161 PCF11O94913 1555 aaKnown RBP12.64□□□□□ -0.39
SPTAN1-201ENST00000358161 TRIM29Q14134 588 aa12.64□□□□□ -0.39
SPTAN1-201ENST00000358161 FBXW7Q969H0 707 aa12.64□□□□□ -0.39
SPTAN1-201ENST00000358161 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
SPTAN1-201ENST00000358161 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
SPTAN1-201ENST00000358161 DDX11L8A8MPP1 907 aa12.63□□□□□ -0.39
SPTAN1-201ENST00000358161 ARHGEF11O15085 1522 aa12.63□□□□□ -0.39
SPTAN1-201ENST00000358161 AIMP1Q12904 312 aaKnown RBP12.63□□□□□ -0.39
SPTAN1-201ENST00000358161 TCEAL9Q9UHQ7 104 aa12.63□□□□□ -0.39
SPTAN1-201ENST00000358161 UBTFL1P0CB47 393 aaPredicted RBP12.63□□□□□ -0.39
SPTAN1-201ENST00000358161 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
SPTAN1-201ENST00000358161 ERICH2A1L162 156 aa12.62□□□□□ -0.39
SPTAN1-201ENST00000358161 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
SPTAN1-201ENST00000358161 PTPN23Q9H3S7 1636 aa12.62□□□□□ -0.39
SPTAN1-201ENST00000358161 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
SPTAN1-201ENST00000358161 ANO2Q9NQ90 1003 aa12.61□□□□□ -0.39
SPTAN1-201ENST00000358161 GOLGA6L3A6NEY3 463 aa12.61□□□□□ -0.39
SPTAN1-201ENST00000358161 CAMSAP2Q08AD1 1489 aa12.61□□□□□ -0.39
SPTAN1-201ENST00000358161 STRN4Q9NRL3 753 aa12.61□□□□□ -0.39
SPTAN1-201ENST00000358161 INTS3Q68E01 1043 aaKnown RBP12.61□□□□□ -0.39
SPTAN1-201ENST00000358161 PPP2R1AP30153 589 aa12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 NOC3LQ8WTT2 800 aaKnown RBP12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 ADGRL1O94910 1474 aa12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 CPLX1O14810 134 aa12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 RAD21O60216 631 aa12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 CREBRFQ8IUR6 639 aa12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 USP35Q9P2H5 1018 aa12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 PNISRQ8TF01 805 aaKnown RBP12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 TPD52L1Q16890 204 aaPredicted RBP12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
SPTAN1-201ENST00000358161 PRKAR2BP31323 418 aa12.59□□□□□ -0.39
SPTAN1-201ENST00000358161 GNAI3P08754 354 aa12.59□□□□□ -0.39
SPTAN1-201ENST00000358161 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
SPTAN1-201ENST00000358161 SPG7Q9UQ90 795 aa12.59□□□□□ -0.39
SPTAN1-201ENST00000358161 PDE4AP27815 886 aa12.59□□□□□ -0.39
SPTAN1-201ENST00000358161 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
SPTAN1-201ENST00000358161 TPM2P07951 284 aa12.58□□□□□ -0.39
SPTAN1-201ENST00000358161 MCTP1Q6DN14 999 aa12.58□□□□□ -0.39
SPTAN1-201ENST00000358161 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.39
SPTAN1-201ENST00000358161 ADAMTS8Q9UP79 889 aa12.58□□□□□ -0.39
SPTAN1-201ENST00000358161 TOM1L2Q6ZVM7 507 aa12.58□□□□□ -0.4
SPTAN1-201ENST00000358161 NEUROD6Q96NK8 337 aa12.58□□□□□ -0.4
SPTAN1-201ENST00000358161 NFXL1Q6ZNB6 911 aa12.58□□□□□ -0.4
SPTAN1-201ENST00000358161 BIVM-ERCC5R4GMW8 1640 aa12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 KLHL34Q8N239 644 aa12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 HMGB2P26583 209 aaKnown RBP12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 CEP89Q96ST8 783 aa12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 DHX16O60231 1041 aaKnown RBP12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 FOXD4L5Q5VV16 416 aaPredicted RBP12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 FOXD4L4Q8WXT5 416 aaPredicted RBP12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 SF3B2Q13435 895 aaKnown RBP12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 SKOR2Q2VWA4 1001 aaPredicted RBP12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 DEKP35659 375 aaKnown RBP12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
SPTAN1-201ENST00000358161 CABP4P57796 275 aa12.56□□□□□ -0.4
SPTAN1-201ENST00000358161 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
SPTAN1-201ENST00000358161 SLC26A8Q96RN1 970 aa12.56□□□□□ -0.4
SPTAN1-201ENST00000358161 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
SPTAN1-201ENST00000358161 CCDC47Q96A33 483 aaKnown RBP12.56□□□□□ -0.4
SPTAN1-201ENST00000358161 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
SPTAN1-201ENST00000358161 PLB1Q6P1J6 1458 aa12.56□□□□□ -0.4
SPTAN1-201ENST00000358161 FAM135AQ9P2D6 1515 aa12.56□□□□□ -0.4
SPTAN1-201ENST00000358161 TPM3P06753 285 aa12.56□□□□□ -0.4
SPTAN1-201ENST00000358161 RTN4Q9NQC3 1192 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-201ENST00000358161 RALYLQ86SE5 291 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-201ENST00000358161 HOOK1Q9UJC3 728 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-201ENST00000358161 GOLGA6L19H0YKK7 550 aa12.55□□□□□ -0.4
SPTAN1-201ENST00000358161 CNTROBQ8N137 903 aa12.55□□□□□ -0.4
SPTAN1-201ENST00000358161 URB2Q14146 1524 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-201ENST00000358161 ERC1Q8IUD2 1116 aa12.55□□□□□ -0.4
SPTAN1-201ENST00000358161 TBC1D2BQ9UPU7 963 aa12.55□□□□□ -0.4
SPTAN1-201ENST00000358161 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
SPTAN1-201ENST00000358161 CLASRPQ8N2M8 674 aaKnown RBP12.54□□□□□ -0.4
SPTAN1-201ENST00000358161 PES1O00541 588 aaKnown RBP12.54□□□□□ -0.4
SPTAN1-201ENST00000358161 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
SPTAN1-201ENST00000358161 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms