RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 MIA2Q96PC5 1412 aa16.04■□□□□ 0.16
SCN8A-202ENST00000355133 ANKRD20A12PQ8NF67 263 aa16.04■□□□□ 0.16
SCN8A-202ENST00000355133 IGF1RP08069 1367 aa16.03■□□□□ 0.16
SCN8A-202ENST00000355133 MTMR7Q9Y216 660 aa16.03■□□□□ 0.16
SCN8A-202ENST00000355133 CCDC7Q96M83 1385 aa16.03■□□□□ 0.16
SCN8A-202ENST00000355133 CCDC43Q96MW1 224 aaKnown RBP16.03■□□□□ 0.16
SCN8A-202ENST00000355133 PRDM2Q13029 1718 aa16.03■□□□□ 0.16
SCN8A-202ENST00000355133 KDM4AO75164 1064 aa16.03■□□□□ 0.16
SCN8A-202ENST00000355133 FGD6Q6ZV73 1430 aa16.03■□□□□ 0.16
SCN8A-202ENST00000355133 IPO7O95373 1038 aaKnown RBP16.02■□□□□ 0.16
SCN8A-202ENST00000355133 RALYLQ86SE5 291 aaKnown RBP16.02■□□□□ 0.16
SCN8A-202ENST00000355133 HOOK1Q9UJC3 728 aaKnown RBP16.02■□□□□ 0.16
SCN8A-202ENST00000355133 MTHFSP49914 203 aa16.02■□□□□ 0.15
SCN8A-202ENST00000355133 ABTB2Q8N961 1025 aa16.02■□□□□ 0.15
SCN8A-202ENST00000355133 ESCO1Q5FWF5 840 aa16.01■□□□□ 0.15
SCN8A-202ENST00000355133 CCDC70Q6NSX1 233 aa16.01■□□□□ 0.15
SCN8A-202ENST00000355133 CHMP5Q9NZZ3 219 aa16.01■□□□□ 0.15
SCN8A-202ENST00000355133 SAFBQ15424 915 aaKnown RBP eCLIP16.01■□□□□ 0.15
SCN8A-202ENST00000355133 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
SCN8A-202ENST00000355133 AFAP1Q8N556 730 aa16■□□□□ 0.15
SCN8A-202ENST00000355133 AQRO60306 1485 aaKnown RBP eCLIP16■□□□□ 0.15
SCN8A-202ENST00000355133 ANKRD50Q9ULJ7 1429 aa16■□□□□ 0.15
SCN8A-202ENST00000355133 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
SCN8A-202ENST00000355133 CFAP70Q5T0N1 1121 aa16■□□□□ 0.15
SCN8A-202ENST00000355133 C22orf23Q9BZE7 217 aa15.99■□□□□ 0.15
SCN8A-202ENST00000355133 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
SCN8A-202ENST00000355133 SASS6Q6UVJ0 657 aa15.99■□□□□ 0.15
SCN8A-202ENST00000355133 HOMER1Q86YM7 354 aa15.99■□□□□ 0.15
SCN8A-202ENST00000355133 FSD1Q9BTV5 496 aa15.98■□□□□ 0.15
SCN8A-202ENST00000355133 GPRASP1Q5JY77 1395 aa15.98■□□□□ 0.15
SCN8A-202ENST00000355133 CCDC73Q6ZRK6 1079 aa15.97■□□□□ 0.15
SCN8A-202ENST00000355133 TXNDC2Q86VQ3 553 aa15.97■□□□□ 0.15
SCN8A-202ENST00000355133 STAC3Q96MF2 364 aa15.97■□□□□ 0.15
SCN8A-202ENST00000355133 STRN4Q9NRL3 753 aa15.97■□□□□ 0.15
SCN8A-202ENST00000355133 CDC45O75419 566 aa15.97■□□□□ 0.15
SCN8A-202ENST00000355133 DNAJC2Q99543 621 aaKnown RBP15.97■□□□□ 0.15
SCN8A-202ENST00000355133 CNKSR2Q8WXI2 1034 aa15.97■□□□□ 0.15
SCN8A-202ENST00000355133 FBXO3Q9UK99 471 aa15.97■□□□□ 0.15
SCN8A-202ENST00000355133 CUX1P39880 1505 aa15.96■□□□□ 0.15
SCN8A-202ENST00000355133 TCP11L2Q8N4U5 519 aa15.96■□□□□ 0.15
SCN8A-202ENST00000355133 CCDC30Q5VVM6 783 aa15.96■□□□□ 0.15
SCN8A-202ENST00000355133 ARHGAP5Q13017 1502 aa15.96■□□□□ 0.15
SCN8A-202ENST00000355133 SURF6O75683 361 aaKnown RBP15.96■□□□□ 0.14
SCN8A-202ENST00000355133 PRKAR2BP31323 418 aa15.95■□□□□ 0.14
SCN8A-202ENST00000355133 NUCB2P80303 420 aa15.95■□□□□ 0.14
SCN8A-202ENST00000355133 PROSER2Q86WR7 435 aaPredicted RBP15.95■□□□□ 0.14
SCN8A-202ENST00000355133 CNTROBQ8N137 903 aa15.95■□□□□ 0.14
SCN8A-202ENST00000355133 CNTLNQ9NXG0 1405 aa15.95■□□□□ 0.14
SCN8A-202ENST00000355133 NINLQ9Y2I6 1382 aa15.95■□□□□ 0.14
SCN8A-202ENST00000355133 IKQ13123 557 aaPredicted RBP15.95■□□□□ 0.14
SCN8A-202ENST00000355133 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
SCN8A-202ENST00000355133 PRAM1Q96QH2 718 aa15.95■□□□□ 0.14
SCN8A-202ENST00000355133 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
SCN8A-202ENST00000355133 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
SCN8A-202ENST00000355133 NAP1L1P55209 391 aaKnown RBP15.94■□□□□ 0.14
SCN8A-202ENST00000355133 GPS2Q13227 327 aa15.94■□□□□ 0.14
SCN8A-202ENST00000355133 KIF6Q6ZMV9 814 aa15.94■□□□□ 0.14
SCN8A-202ENST00000355133 HSP90AA2PQ14568 343 aaPredicted RBP15.93■□□□□ 0.14
SCN8A-202ENST00000355133 CLASRPQ8N2M8 674 aaKnown RBP15.93■□□□□ 0.14
SCN8A-202ENST00000355133 C1orf115Q9H7X2 142 aa15.93■□□□□ 0.14
SCN8A-202ENST00000355133 BRMS1Q9HCU9 246 aa15.93■□□□□ 0.14
SCN8A-202ENST00000355133 PATL2C9JE40 543 aaKnown RBP15.93■□□□□ 0.14
SCN8A-202ENST00000355133 EXOSC9Q06265 439 aaKnown RBP15.93■□□□□ 0.14
SCN8A-202ENST00000355133 CDCA7LQ96GN5 454 aa15.93■□□□□ 0.14
SCN8A-202ENST00000355133 TBC1D2BQ9UPU7 963 aa15.93■□□□□ 0.14
SCN8A-202ENST00000355133 GNAI3P08754 354 aa15.92■□□□□ 0.14
SCN8A-202ENST00000355133 PSMA5P28066 241 aa15.92■□□□□ 0.14
SCN8A-202ENST00000355133 PPP2R1AP30153 589 aa15.92■□□□□ 0.14
SCN8A-202ENST00000355133 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
SCN8A-202ENST00000355133 TWISTNBQ3B726 338 aaPredicted RBP15.9■□□□□ 0.14
SCN8A-202ENST00000355133 ATP2B1P20020 1258 aa15.9■□□□□ 0.14
SCN8A-202ENST00000355133 XBP1P17861 261 aa15.9■□□□□ 0.14
SCN8A-202ENST00000355133 LRRC9Q6ZRR7 1453 aa15.9■□□□□ 0.14
SCN8A-202ENST00000355133 RRBP1Q9P2E9 1410 aaKnown RBP15.9■□□□□ 0.14
SCN8A-202ENST00000355133 WASHC2AQ641Q2 1341 aa15.9■□□□□ 0.14
SCN8A-202ENST00000355133 CT47A1Q5JQC4 288 aaPredicted RBP15.9■□□□□ 0.14
SCN8A-202ENST00000355133 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
SCN8A-202ENST00000355133 FYCO1Q9BQS8 1478 aa15.9■□□□□ 0.14
SCN8A-202ENST00000355133 RRP12Q5JTH9 1297 aaKnown RBP15.89■□□□□ 0.13
SCN8A-202ENST00000355133 NBPF1Q3BBV0 1214 aa15.89■□□□□ 0.13
SCN8A-202ENST00000355133 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.89■□□□□ 0.13
SCN8A-202ENST00000355133 OLFM4Q6UX06 510 aa15.89■□□□□ 0.13
SCN8A-202ENST00000355133 IFT57Q9NWB7 429 aa15.89■□□□□ 0.13
SCN8A-202ENST00000355133 BRD4O60885 1362 aaPredicted RBP15.89■□□□□ 0.13
SCN8A-202ENST00000355133 TATP17735 454 aaPredicted RBP15.88■□□□□ 0.13
SCN8A-202ENST00000355133 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
SCN8A-202ENST00000355133 TSR2Q969E8 191 aaKnown RBP15.88■□□□□ 0.13
SCN8A-202ENST00000355133 SDF4Q9BRK5 362 aa15.88■□□□□ 0.13
SCN8A-202ENST00000355133 CNNM1Q9NRU3 951 aa15.88■□□□□ 0.13
SCN8A-202ENST00000355133 AAMPQ13685 434 aa15.88■□□□□ 0.13
SCN8A-202ENST00000355133 SETQ01105 290 aaPredicted RBP15.88■□□□□ 0.13
SCN8A-202ENST00000355133 PDILTQ8N807 584 aa15.88■□□□□ 0.13
SCN8A-202ENST00000355133 EPS15P42566 896 aa15.88■□□□□ 0.13
SCN8A-202ENST00000355133 CDK19Q9BWU1 502 aa15.88■□□□□ 0.13
SCN8A-202ENST00000355133 SMG6Q86US8 1419 aaKnown RBP15.88■□□□□ 0.13
SCN8A-202ENST00000355133 NUTM2BA6NNL0 878 aaPredicted RBP15.87■□□□□ 0.13
SCN8A-202ENST00000355133 NUTM2EB1AL46 878 aaPredicted RBP15.87■□□□□ 0.13
SCN8A-202ENST00000355133 NUTM2AQ8IVF1 878 aaPredicted RBP15.87■□□□□ 0.13
SCN8A-202ENST00000355133 DDX54Q8TDD1 881 aaKnown RBP15.87■□□□□ 0.13
SCN8A-202ENST00000355133 TTC39AQ5SRH9 613 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms