RNA–Protein interactions for RNA: ENST00000355123.8

ITSN2-201, Transcript of intersectin 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ITSN2, Length 6,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-201ENST00000355123 RUNDC1Q96C34 613 aa20.45■□□□□ 0.86
ITSN2-201ENST00000355123 WASHC4Q2M389 1173 aa20.45■□□□□ 0.86
ITSN2-201ENST00000355123 CABP2Q9NPB3 220 aa20.45■□□□□ 0.86
ITSN2-201ENST00000355123 API5Q9BZZ5 524 aaKnown RBP20.44■□□□□ 0.86
ITSN2-201ENST00000355123 LRRFIP1Q32MZ4 808 aaKnown RBP20.44■□□□□ 0.86
ITSN2-201ENST00000355123 NFKBIBQ15653 356 aa20.44■□□□□ 0.86
ITSN2-201ENST00000355123 MPNDQ8N594 471 aa20.44■□□□□ 0.86
ITSN2-201ENST00000355123 RNF20Q5VTR2 975 aa20.43■□□□□ 0.86
ITSN2-201ENST00000355123 RIC3Q7Z5B4 369 aa20.43■□□□□ 0.86
ITSN2-201ENST00000355123 NOM1Q5C9Z4 860 aaKnown RBP20.43■□□□□ 0.86
ITSN2-201ENST00000355123 ANKRD20A12PQ8NF67 263 aa20.43■□□□□ 0.86
ITSN2-201ENST00000355123 FAM177BA6PVY3 158 aa20.43■□□□□ 0.86
ITSN2-201ENST00000355123 DDX58O95786 925 aaKnown RBP20.43■□□□□ 0.86
ITSN2-201ENST00000355123 CAGE1Q8TC20 777 aa20.42■□□□□ 0.86
ITSN2-201ENST00000355123 CCDC47Q96A33 483 aaKnown RBP20.42■□□□□ 0.86
ITSN2-201ENST00000355123 MEX3CQ5U5Q3 659 aaKnown RBP20.42■□□□□ 0.86
ITSN2-201ENST00000355123 IL27Q8NEV9 243 aa20.42■□□□□ 0.86
ITSN2-201ENST00000355123 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.42■□□□□ 0.866e-7■■■■■ 47.3
ITSN2-201ENST00000355123 C1orf115Q9H7X2 142 aa20.41■□□□□ 0.86
ITSN2-201ENST00000355123 H0YHG0 523 aa20.41■□□□□ 0.86
ITSN2-201ENST00000355123 CNKSR2Q8WXI2 1034 aa20.41■□□□□ 0.86
ITSN2-201ENST00000355123 ARGLU1Q9NWB6 273 aaPredicted RBP20.4■□□□□ 0.86
ITSN2-201ENST00000355123 CHMP4CQ96CF2 233 aa20.4■□□□□ 0.86
ITSN2-201ENST00000355123 NASPP49321 788 aaPredicted RBP20.4■□□□□ 0.86
ITSN2-201ENST00000355123 ZFYVE27Q5T4F4 411 aa20.39■□□□□ 0.85
ITSN2-201ENST00000355123 HOOK1Q9UJC3 728 aaKnown RBP20.39■□□□□ 0.85
ITSN2-201ENST00000355123 CT47A1Q5JQC4 288 aaPredicted RBP20.39■□□□□ 0.85
ITSN2-201ENST00000355123 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
ITSN2-201ENST00000355123 ROCK1Q13464 1354 aa20.39■□□□□ 0.85
ITSN2-201ENST00000355123 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
ITSN2-201ENST00000355123 TMEM132EQ6IEE7 984 aa20.38■□□□□ 0.85
ITSN2-201ENST00000355123 CCDC43Q96MW1 224 aaKnown RBP20.38■□□□□ 0.85
ITSN2-201ENST00000355123 HSP90B2PQ58FF3 399 aa20.38■□□□□ 0.85
ITSN2-201ENST00000355123 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
ITSN2-201ENST00000355123 KIF7Q2M1P5 1343 aa20.38■□□□□ 0.85
ITSN2-201ENST00000355123 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
ITSN2-201ENST00000355123 CCDC73Q6ZRK6 1079 aa20.37■□□□□ 0.85
ITSN2-201ENST00000355123 ZNF644Q9H582 1327 aaPredicted RBP20.37■□□□□ 0.85
ITSN2-201ENST00000355123 SPC24Q8NBT2 197 aa20.37■□□□□ 0.85
ITSN2-201ENST00000355123 DNAJC2Q99543 621 aaKnown RBP20.37■□□□□ 0.85
ITSN2-201ENST00000355123 CDCA7LQ96GN5 454 aa20.36■□□□□ 0.85
ITSN2-201ENST00000355123 HSP90AB3PQ58FF7 597 aa20.36■□□□□ 0.85
ITSN2-201ENST00000355123 STK11IPQ8N1F8 1099 aa20.36■□□□□ 0.85
ITSN2-201ENST00000355123 PKNOX2Q96KN3 472 aa20.36■□□□□ 0.85
ITSN2-201ENST00000355123 CAVIN1Q6NZI2 390 aaKnown RBP20.36■□□□□ 0.85
ITSN2-201ENST00000355123 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
ITSN2-201ENST00000355123 RBM33Q96EV2 1170 aaKnown RBP20.35■□□□□ 0.85
ITSN2-201ENST00000355123 ERC2O15083 957 aa20.35■□□□□ 0.85
ITSN2-201ENST00000355123 RALYLQ86SE5 291 aaKnown RBP20.35■□□□□ 0.85
ITSN2-201ENST00000355123 CCDC39Q9UFE4 941 aa20.35■□□□□ 0.85
ITSN2-201ENST00000355123 UBTFL1P0CB47 393 aaPredicted RBP20.34■□□□□ 0.85
ITSN2-201ENST00000355123 ATP2B1P20020 1258 aa20.34■□□□□ 0.85
ITSN2-201ENST00000355123 CEBPZQ03701 1054 aaKnown RBP20.34■□□□□ 0.85
ITSN2-201ENST00000355123 GNAI1P63096 354 aa20.34■□□□□ 0.85
ITSN2-201ENST00000355123 SMC2O95347 1197 aa20.34■□□□□ 0.85
ITSN2-201ENST00000355123 NUCB2P80303 420 aa20.34■□□□□ 0.85
ITSN2-201ENST00000355123 BRPF1P55201 1214 aaPredicted RBP20.34■□□□□ 0.85
ITSN2-201ENST00000355123 CWC22Q9HCG8 908 aaKnown RBP20.34■□□□□ 0.85
ITSN2-201ENST00000355123 SAFBQ15424 915 aaKnown RBP eCLIP20.33■□□□□ 0.85
ITSN2-201ENST00000355123 FMNL2Q96PY5 1086 aa20.33■□□□□ 0.85
ITSN2-201ENST00000355123 ADAMTS8Q9UP79 889 aa20.33■□□□□ 0.85
ITSN2-201ENST00000355123 CDC45O75419 566 aa20.33■□□□□ 0.85
ITSN2-201ENST00000355123 ODF2Q5BJF6 829 aa20.33■□□□□ 0.85
ITSN2-201ENST00000355123 FSD1Q9BTV5 496 aa20.33■□□□□ 0.84
ITSN2-201ENST00000355123 KRI1Q8N9T8 703 aaKnown RBP20.33■□□□□ 0.84
ITSN2-201ENST00000355123 NLRP2Q9NX02 1062 aa20.33■□□□□ 0.84
ITSN2-201ENST00000355123 CCDC7Q96M83 1385 aa20.32■□□□□ 0.84
ITSN2-201ENST00000355123 ACBD3Q9H3P7 528 aa20.32■□□□□ 0.84
ITSN2-201ENST00000355123 MAP4K4O95819 1239 aaPredicted RBP20.32■□□□□ 0.84
ITSN2-201ENST00000355123 RDXP35241 583 aaKnown RBP20.32■□□□□ 0.84
ITSN2-201ENST00000355123 EPS15P42566 896 aa20.31■□□□□ 0.84
ITSN2-201ENST00000355123 RAPGEF4Q8WZA2 1011 aa20.31■□□□□ 0.84
ITSN2-201ENST00000355123 OLFM4Q6UX06 510 aa20.3■□□□□ 0.84
ITSN2-201ENST00000355123 TRIM5Q9C035 493 aa20.3■□□□□ 0.84
ITSN2-201ENST00000355123 TSPYL1Q9H0U9 437 aa20.3■□□□□ 0.84
ITSN2-201ENST00000355123 CDR1P51861 262 aa20.3■□□□□ 0.84
ITSN2-201ENST00000355123 PTPRGP23470 1445 aa20.29■□□□□ 0.84
ITSN2-201ENST00000355123 IKQ13123 557 aaPredicted RBP20.28■□□□□ 0.84
ITSN2-201ENST00000355123 CNTROBQ8N137 903 aa20.28■□□□□ 0.84
ITSN2-201ENST00000355123 CCDC191Q8NCU4 936 aa20.28■□□□□ 0.84
ITSN2-201ENST00000355123 NINLQ9Y2I6 1382 aa20.28■□□□□ 0.84
ITSN2-201ENST00000355123 TRAK2O60296 914 aa20.28■□□□□ 0.84
ITSN2-201ENST00000355123 PRPF40AO75400 957 aaKnown RBP20.28■□□□□ 0.84
ITSN2-201ENST00000355123 SDF4Q9BRK5 362 aa20.28■□□□□ 0.84
ITSN2-201ENST00000355123 AXDND1Q5T1B0 1012 aaPredicted RBP20.27■□□□□ 0.84
ITSN2-201ENST00000355123 MTHFSP49914 203 aa20.27■□□□□ 0.84
ITSN2-201ENST00000355123 CNTLNQ9NXG0 1405 aa20.27■□□□□ 0.84
ITSN2-201ENST00000355123 STK3Q13188 491 aa20.26■□□□□ 0.83
ITSN2-201ENST00000355123 SURF6O75683 361 aaKnown RBP20.26■□□□□ 0.83
ITSN2-201ENST00000355123 HSP90AB4PQ58FF6 505 aa20.26■□□□□ 0.83
ITSN2-201ENST00000355123 CWC15Q9P013 229 aaKnown RBP20.26■□□□□ 0.83
ITSN2-201ENST00000355123 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
ITSN2-201ENST00000355123 OFD1O75665 1012 aa20.25■□□□□ 0.83
ITSN2-201ENST00000355123 MRE11P49959 708 aa20.25■□□□□ 0.83
ITSN2-201ENST00000355123 TSR2Q969E8 191 aaKnown RBP20.25■□□□□ 0.83
ITSN2-201ENST00000355123 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
ITSN2-201ENST00000355123 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.24■□□□□ 0.83
ITSN2-201ENST00000355123 NEK4P51957 841 aa20.24■□□□□ 0.83
ITSN2-201ENST00000355123 FAM177A1Q8N128 213 aaPredicted RBP20.24■□□□□ 0.83
ITSN2-201ENST00000355123 BRMS1Q9HCU9 246 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms