RNA–Protein interactions for RNA: ENST00000354209.7

PRKAA1-202, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-202ENST00000354209 PLEKHH1Q9ULM0 1364 aa29.49■■■□□ 2.31
PRKAA1-202ENST00000354209 CNGB1Q14028 1251 aaPredicted RBP29.48■■■□□ 2.31
PRKAA1-202ENST00000354209 MINK1Q8N4C8 1332 aaPredicted RBP29.47■■■□□ 2.31
PRKAA1-202ENST00000354209 TBX22Q9Y458 520 aa29.46■■■□□ 2.31
PRKAA1-202ENST00000354209 WAPLQ7Z5K2 1190 aa29.45■■■□□ 2.31
PRKAA1-202ENST00000354209 KNSTRNQ9Y448 316 aa29.45■■■□□ 2.31
PRKAA1-202ENST00000354209 MRS2Q9HD23 443 aa29.45■■■□□ 2.3
PRKAA1-202ENST00000354209 MYBBP1AQ9BQG0 1328 aaKnown RBP29.45■■■□□ 2.3
PRKAA1-202ENST00000354209 NPC1L1Q9UHC9 1359 aa29.44■■■□□ 2.3
PRKAA1-202ENST00000354209 PTPRUQ92729 1446 aa29.44■■■□□ 2.3
PRKAA1-202ENST00000354209 AMER1Q5JTC6 1135 aaPredicted RBP29.43■■■□□ 2.3
PRKAA1-202ENST00000354209 SLC26A8Q96RN1 970 aa29.43■■■□□ 2.3
PRKAA1-202ENST00000354209 CABP2Q9NPB3 220 aa29.43■■■□□ 2.3
PRKAA1-202ENST00000354209 NINLQ9Y2I6 1382 aa29.42■■■□□ 2.3
PRKAA1-202ENST00000354209 ATAD2Q6PL18 1390 aa29.41■■■□□ 2.3
PRKAA1-202ENST00000354209 ROBO2Q9HCK4 1378 aa29.41■■■□□ 2.3
PRKAA1-202ENST00000354209 CC2D1BQ5T0F9 858 aaKnown RBP29.4■■■□□ 2.3
PRKAA1-202ENST00000354209 SLC12A5Q9H2X9 1139 aa29.4■■■□□ 2.3
PRKAA1-202ENST00000354209 CARD14Q9BXL6 1004 aa29.39■■■□□ 2.3
PRKAA1-202ENST00000354209 SRPK2P78362 688 aaKnown RBP29.39■■■□□ 2.3
PRKAA1-202ENST00000354209 ANKLE2Q86XL3 938 aa29.38■■■□□ 2.29
PRKAA1-202ENST00000354209 TMC1Q8TDI8 760 aa29.38■■■□□ 2.29
PRKAA1-202ENST00000354209 BRD4O60885 1362 aaPredicted RBP29.38■■■□□ 2.29
PRKAA1-202ENST00000354209 XRN1Q8IZH2 1706 aaKnown RBP29.36■■■□□ 2.29
PRKAA1-202ENST00000354209 ANKRD36BQ8N2N9 1353 aa29.36■■■□□ 2.29
PRKAA1-202ENST00000354209 CDK19Q9BWU1 502 aa29.36■■■□□ 2.29
PRKAA1-202ENST00000354209 PTCH1Q13635 1447 aa29.36■■■□□ 2.29
PRKAA1-202ENST00000354209 USP32Q8NFA0 1604 aa29.36■■■□□ 2.29
PRKAA1-202ENST00000354209 ADGRB2O60241 1585 aa29.35■■■□□ 2.29
PRKAA1-202ENST00000354209 PIK3R4Q99570 1358 aa29.34■■■□□ 2.29
PRKAA1-202ENST00000354209 NSD3Q9BZ95 1437 aa29.33■■■□□ 2.29
PRKAA1-202ENST00000354209 NLRP13Q86W25 1043 aa29.33■■■□□ 2.29
PRKAA1-202ENST00000354209 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.31■■■□□ 2.28
PRKAA1-202ENST00000354209 AMOTL2Q9Y2J4 779 aa29.31■■■□□ 2.28
PRKAA1-202ENST00000354209 WASLO00401 505 aaPredicted RBP29.3■■■□□ 2.28
PRKAA1-202ENST00000354209 CD163L1Q9NR16 1453 aa29.28■■■□□ 2.28
PRKAA1-202ENST00000354209 A0A1W2PP64 1363 aa29.27■■■□□ 2.28
PRKAA1-202ENST00000354209 NPHP4O75161 1426 aaPredicted RBP29.26■■■□□ 2.27
PRKAA1-202ENST00000354209 FAM9BQ8IZU0 186 aa29.26■■■□□ 2.27
PRKAA1-202ENST00000354209 PNISRQ8TF01 805 aaKnown RBP29.24■■■□□ 2.27
PRKAA1-202ENST00000354209 ATP7BP35670 1465 aa29.23■■■□□ 2.27
PRKAA1-202ENST00000354209 CHD2O14647 1828 aaKnown RBP29.23■■■□□ 2.27
PRKAA1-202ENST00000354209 TERF2IPQ9NYB0 399 aa29.21■■■□□ 2.27
PRKAA1-202ENST00000354209 PPP2R1AP30153 589 aa29.2■■■□□ 2.27
PRKAA1-202ENST00000354209 CGNL1Q0VF96 1302 aa29.2■■■□□ 2.26
PRKAA1-202ENST00000354209 KDM4FA0A1W2PPD8 638 aa29.2■■■□□ 2.26
PRKAA1-202ENST00000354209 NSD2O96028 1365 aa29.19■■■□□ 2.26
PRKAA1-202ENST00000354209 CABP1Q9NZU7 370 aa29.19■■■□□ 2.26
PRKAA1-202ENST00000354209 KCNA6P17658 529 aa29.18■■■□□ 2.26
PRKAA1-202ENST00000354209 PPIP5K1Q6PFW1 1433 aa29.17■■■□□ 2.26
PRKAA1-202ENST00000354209 HNRNPUQ00839 825 aaKnown RBP eCLIP29.16■■■□□ 2.26
PRKAA1-202ENST00000354209 NUDT16Q96DE0 195 aaKnown RBP29.16■■■□□ 2.26
PRKAA1-202ENST00000354209 TOPAZ1Q8N9V7 1692 aa29.15■■■□□ 2.26
PRKAA1-202ENST00000354209 HDGFL2Q7Z4V5 671 aaPredicted RBP29.15■■■□□ 2.26
PRKAA1-202ENST00000354209 CDC42BPGQ6DT37 1551 aa29.14■■■□□ 2.26
PRKAA1-202ENST00000354209 PRR36Q9H6K5 1346 aa29.14■■■□□ 2.26
PRKAA1-202ENST00000354209 NCKAP5LQ9HCH0 1330 aa29.14■■■□□ 2.26
PRKAA1-202ENST00000354209 CPSF1Q10570 1443 aaKnown RBP29.13■■■□□ 2.25
PRKAA1-202ENST00000354209 CCDC61Q9Y6R9 512 aa29.13■■■□□ 2.25
PRKAA1-202ENST00000354209 NWD1Q149M9 1564 aa29.1■■■□□ 2.25
PRKAA1-202ENST00000354209 ANKRD26Q9UPS8 1709 aa29.09■■■□□ 2.25
PRKAA1-202ENST00000354209 MORC1Q86VD1 984 aa29.08■■■□□ 2.25
PRKAA1-202ENST00000354209 MON2Q7Z3U7 1717 aa29.07■■■□□ 2.24
PRKAA1-202ENST00000354209 AKAP12Q02952 1782 aa29.07■■■□□ 2.24
PRKAA1-202ENST00000354209 ITSN1Q15811 1721 aa29.06■■■□□ 2.24
PRKAA1-202ENST00000354209 KIF20BQ96Q89 1820 aa29.06■■■□□ 2.24
PRKAA1-202ENST00000354209 INSRP06213 1382 aa29.06■■■□□ 2.24
PRKAA1-202ENST00000354209 EDC4Q6P2E9 1401 aaKnown RBP29.05■■■□□ 2.24
PRKAA1-202ENST00000354209 NALCNQ8IZF0 1738 aa29.05■■■□□ 2.24
PRKAA1-202ENST00000354209 LMTK3Q96Q04 1460 aa29.03■■■□□ 2.24
PRKAA1-202ENST00000354209 ZBED9Q6R2W3 1325 aa29.02■■■□□ 2.24
PRKAA1-202ENST00000354209 FYB1O15117 783 aa29.02■■■□□ 2.24
PRKAA1-202ENST00000354209 NKTRP30414 1462 aaKnown RBP29.02■■■□□ 2.24
PRKAA1-202ENST00000354209 FMN2Q9NZ56 1722 aa29.02■■■□□ 2.24
PRKAA1-202ENST00000354209 ANKARQ7Z5J8 1434 aa29.01■■■□□ 2.23
PRKAA1-202ENST00000354209 PLEKHG3A1L390 1219 aa29■■■□□ 2.23
PRKAA1-202ENST00000354209 GGNBP2Q9H3C7 697 aa28.99■■■□□ 2.23
PRKAA1-202ENST00000354209 POLR3AO14802 1390 aaPredicted RBP28.99■■■□□ 2.23
PRKAA1-202ENST00000354209 NRKQ7Z2Y5 1582 aa28.98■■■□□ 2.23
PRKAA1-202ENST00000354209 BLMP54132 1417 aaPredicted RBP28.98■■■□□ 2.23
PRKAA1-202ENST00000354209 ADGRL3Q9HAR2 1447 aa28.98■■■□□ 2.23
PRKAA1-202ENST00000354209 ZNF692Q9BU19 519 aaPredicted RBP28.98■■■□□ 2.23
PRKAA1-202ENST00000354209 HSPA2P54652 639 aa28.96■■■□□ 2.23
PRKAA1-202ENST00000354209 NUTM2FA1L443 756 aa28.96■■■□□ 2.23
PRKAA1-202ENST00000354209 TNNT2P45379 298 aaPredicted RBP28.94■■■□□ 2.22
PRKAA1-202ENST00000354209 RGPD8O14715 1765 aaPredicted RBP28.94■■■□□ 2.22
PRKAA1-202ENST00000354209 ACEP12821 1306 aa28.94■■■□□ 2.22
PRKAA1-202ENST00000354209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.92■■■□□ 2.227e-7■□□□□ 11.1
PRKAA1-202ENST00000354209 USP6P35125 1406 aa28.91■■■□□ 2.22
PRKAA1-202ENST00000354209 WDR43Q15061 677 aaKnown RBP eCLIP28.9■■■□□ 2.22
PRKAA1-202ENST00000354209 SHPRHQ149N8 1683 aa28.9■■■□□ 2.22
PRKAA1-202ENST00000354209 ADAMTS8Q9UP79 889 aa28.9■■■□□ 2.22
PRKAA1-202ENST00000354209 MTHFSP49914 203 aa28.88■■■□□ 2.21
PRKAA1-202ENST00000354209 STRCQ7RTU9 1775 aa28.88■■■□□ 2.21
PRKAA1-202ENST00000354209 SSH2Q76I76 1423 aa28.88■■■□□ 2.21
PRKAA1-202ENST00000354209 RBM33Q96EV2 1170 aaKnown RBP28.87■■■□□ 2.21
PRKAA1-202ENST00000354209 NME9Q86XW9 330 aa28.86■■■□□ 2.21
PRKAA1-202ENST00000354209 STRCP1A6NGW2 1772 aa28.86■■■□□ 2.21
PRKAA1-202ENST00000354209 SCAF1Q9H7N4 1312 aaKnown RBP28.85■■■□□ 2.21
PRKAA1-202ENST00000354209 TTC21BQ7Z4L5 1316 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms