RNA–Protein interactions for RNA: ENST00000350592.7

C1orf43-201, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-201ENST00000350592 NPC1L1Q9UHC9 1359 aa22.49■■□□□ 1.19
C1orf43-201ENST00000350592 CNGB1Q14028 1251 aaPredicted RBP22.49■■□□□ 1.19
C1orf43-201ENST00000350592 CPS1P31327 1500 aa22.48■■□□□ 1.19
C1orf43-201ENST00000350592 DIP2AQ14689 1571 aa22.47■■□□□ 1.19
C1orf43-201ENST00000350592 SETD1BQ9UPS6 1966 aaKnown RBP22.47■■□□□ 1.19
C1orf43-201ENST00000350592 NINLQ9Y2I6 1382 aa22.47■■□□□ 1.19
C1orf43-201ENST00000350592 AMER1Q5JTC6 1135 aaPredicted RBP22.46■■□□□ 1.19
C1orf43-201ENST00000350592 TBX22Q9Y458 520 aa22.46■■□□□ 1.19
C1orf43-201ENST00000350592 MINK1Q8N4C8 1332 aaPredicted RBP22.46■■□□□ 1.19
C1orf43-201ENST00000350592 BRD4O60885 1362 aaPredicted RBP22.45■■□□□ 1.18
C1orf43-201ENST00000350592 CC2D1BQ5T0F9 858 aaKnown RBP22.45■■□□□ 1.18
C1orf43-201ENST00000350592 ATAD2Q6PL18 1390 aa22.45■■□□□ 1.18
C1orf43-201ENST00000350592 WAPLQ7Z5K2 1190 aa22.44■■□□□ 1.18
C1orf43-201ENST00000350592 CABP2Q9NPB3 220 aa22.44■■□□□ 1.18
C1orf43-201ENST00000350592 PLEKHH1Q9ULM0 1364 aa22.44■■□□□ 1.18
C1orf43-201ENST00000350592 TMC1Q8TDI8 760 aa22.43■■□□□ 1.18
C1orf43-201ENST00000350592 SLC12A5Q9H2X9 1139 aa22.43■■□□□ 1.18
C1orf43-201ENST00000350592 SRPK2P78362 688 aaKnown RBP22.42■■□□□ 1.18
C1orf43-201ENST00000350592 NLRP13Q86W25 1043 aa22.42■■□□□ 1.18
C1orf43-201ENST00000350592 CARD14Q9BXL6 1004 aa22.42■■□□□ 1.18
C1orf43-201ENST00000350592 SLC26A8Q96RN1 970 aa22.41■■□□□ 1.18
C1orf43-201ENST00000350592 ANKRD36BQ8N2N9 1353 aa22.4■■□□□ 1.18
C1orf43-201ENST00000350592 CDK19Q9BWU1 502 aa22.4■■□□□ 1.18
C1orf43-201ENST00000350592 ANKLE2Q86XL3 938 aa22.39■■□□□ 1.18
C1orf43-201ENST00000350592 PTPRUQ92729 1446 aa22.38■■□□□ 1.17
C1orf43-201ENST00000350592 ROBO2Q9HCK4 1378 aa22.37■■□□□ 1.17
C1orf43-201ENST00000350592 FAM9BQ8IZU0 186 aa22.37■■□□□ 1.17
C1orf43-201ENST00000350592 NSD3Q9BZ95 1437 aa22.37■■□□□ 1.17
C1orf43-201ENST00000350592 USP32Q8NFA0 1604 aa22.37■■□□□ 1.17
C1orf43-201ENST00000350592 PIK3R4Q99570 1358 aa22.37■■□□□ 1.17
C1orf43-201ENST00000350592 WASLO00401 505 aaPredicted RBP22.35■■□□□ 1.17
C1orf43-201ENST00000350592 PNISRQ8TF01 805 aaKnown RBP22.35■■□□□ 1.17
C1orf43-201ENST00000350592 PTCH1Q13635 1447 aa22.35■■□□□ 1.17
C1orf43-201ENST00000350592 AMOTL2Q9Y2J4 779 aa22.34■■□□□ 1.17
C1orf43-201ENST00000350592 ADGRB2O60241 1585 aa22.33■■□□□ 1.16
C1orf43-201ENST00000350592 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
C1orf43-201ENST00000350592 PPP2R1AP30153 589 aa22.31■■□□□ 1.16
C1orf43-201ENST00000350592 HNRNPUQ00839 825 aaKnown RBP eCLIP22.31■■□□□ 1.16
C1orf43-201ENST00000350592 XRN1Q8IZH2 1706 aaKnown RBP22.3■■□□□ 1.16
C1orf43-201ENST00000350592 A0A1W2PP64 1363 aa22.3■■□□□ 1.16
C1orf43-201ENST00000350592 CGNL1Q0VF96 1302 aa22.3■■□□□ 1.16
C1orf43-201ENST00000350592 CD163L1Q9NR16 1453 aa22.29■■□□□ 1.16
C1orf43-201ENST00000350592 NSD2O96028 1365 aa22.28■■□□□ 1.16
C1orf43-201ENST00000350592 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.28■■□□□ 1.16
C1orf43-201ENST00000350592 HDGFL2Q7Z4V5 671 aaPredicted RBP22.28■■□□□ 1.16
C1orf43-201ENST00000350592 ATP7BP35670 1465 aa22.27■■□□□ 1.16
C1orf43-201ENST00000350592 CABP1Q9NZU7 370 aa22.27■■□□□ 1.16
C1orf43-201ENST00000350592 NPHP4O75161 1426 aaPredicted RBP22.26■■□□□ 1.15
C1orf43-201ENST00000350592 NUDT16Q96DE0 195 aaKnown RBP22.24■■□□□ 1.15
C1orf43-201ENST00000350592 MORC1Q86VD1 984 aa22.23■■□□□ 1.15
C1orf43-201ENST00000350592 CCDC61Q9Y6R9 512 aa22.23■■□□□ 1.15
C1orf43-201ENST00000350592 INSRP06213 1382 aa22.23■■□□□ 1.15
C1orf43-201ENST00000350592 PPIP5K1Q6PFW1 1433 aa22.23■■□□□ 1.15
C1orf43-201ENST00000350592 KCNA6P17658 529 aa22.21■■□□□ 1.15
C1orf43-201ENST00000350592 CHD2O14647 1828 aaKnown RBP22.21■■□□□ 1.15
C1orf43-201ENST00000350592 ZBED9Q6R2W3 1325 aa22.2■■□□□ 1.15
C1orf43-201ENST00000350592 CPSF1Q10570 1443 aaKnown RBP22.2■■□□□ 1.14
C1orf43-201ENST00000350592 CDC42BPGQ6DT37 1551 aa22.19■■□□□ 1.14
C1orf43-201ENST00000350592 PRR36Q9H6K5 1346 aa22.17■■□□□ 1.14
C1orf43-201ENST00000350592 NCKAP5LQ9HCH0 1330 aa22.17■■□□□ 1.14
C1orf43-201ENST00000350592 TOPAZ1Q8N9V7 1692 aa22.16■■□□□ 1.14
C1orf43-201ENST00000350592 KDM4FA0A1W2PPD8 638 aa22.16■■□□□ 1.14
C1orf43-201ENST00000350592 FYB1O15117 783 aa22.15■■□□□ 1.14
C1orf43-201ENST00000350592 EDC4Q6P2E9 1401 aaKnown RBP22.15■■□□□ 1.14
C1orf43-201ENST00000350592 ANKRD26Q9UPS8 1709 aa22.15■■□□□ 1.14
C1orf43-201ENST00000350592 ZNF692Q9BU19 519 aaPredicted RBP22.14■■□□□ 1.14
C1orf43-201ENST00000350592 POLR3AO14802 1390 aaPredicted RBP22.14■■□□□ 1.13
C1orf43-201ENST00000350592 PLEKHG3A1L390 1219 aa22.13■■□□□ 1.13
C1orf43-201ENST00000350592 BLMP54132 1417 aaPredicted RBP22.12■■□□□ 1.13
C1orf43-201ENST00000350592 KIF20BQ96Q89 1820 aa22.12■■□□□ 1.13
C1orf43-201ENST00000350592 AKAP12Q02952 1782 aa22.12■■□□□ 1.13
C1orf43-201ENST00000350592 MON2Q7Z3U7 1717 aa22.11■■□□□ 1.13
C1orf43-201ENST00000350592 WDR43Q15061 677 aaKnown RBP eCLIP22.11■■□□□ 1.13
C1orf43-201ENST00000350592 NWD1Q149M9 1564 aa22.11■■□□□ 1.13
C1orf43-201ENST00000350592 ITSN1Q15811 1721 aa22.11■■□□□ 1.13
C1orf43-201ENST00000350592 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
C1orf43-201ENST00000350592 GGNBP2Q9H3C7 697 aa22.1■■□□□ 1.13
C1orf43-201ENST00000350592 GTF3C3Q9Y5Q9 886 aa22.1■■□□□ 1.13
C1orf43-201ENST00000350592 ANKARQ7Z5J8 1434 aa22.1■■□□□ 1.13
C1orf43-201ENST00000350592 TNNT2P45379 298 aaPredicted RBP22.09■■□□□ 1.13
C1orf43-201ENST00000350592 ADAMTS8Q9UP79 889 aa22.08■■□□□ 1.13
C1orf43-201ENST00000350592 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.06■■□□□ 1.12
C1orf43-201ENST00000350592 FMN2Q9NZ56 1722 aa22.06■■□□□ 1.12
C1orf43-201ENST00000350592 NKTRP30414 1462 aaKnown RBP22.06■■□□□ 1.12
C1orf43-201ENST00000350592 MTHFSP49914 203 aa22.06■■□□□ 1.12
C1orf43-201ENST00000350592 ACEP12821 1306 aa22.05■■□□□ 1.12
C1orf43-201ENST00000350592 NALCNQ8IZF0 1738 aa22.05■■□□□ 1.12
C1orf43-201ENST00000350592 NUTM2FA1L443 756 aa22.05■■□□□ 1.12
C1orf43-201ENST00000350592 CFAP53Q96M91 514 aa22.05■■□□□ 1.12
C1orf43-201ENST00000350592 ADGRL3Q9HAR2 1447 aa22.04■■□□□ 1.12
C1orf43-201ENST00000350592 USP6P35125 1406 aa22.02■■□□□ 1.12
C1orf43-201ENST00000350592 LMTK3Q96Q04 1460 aa22.02■■□□□ 1.12
C1orf43-201ENST00000350592 NRKQ7Z2Y5 1582 aa22.02■■□□□ 1.12
C1orf43-201ENST00000350592 HSPA2P54652 639 aa22■■□□□ 1.11
C1orf43-201ENST00000350592 NME9Q86XW9 330 aa22■■□□□ 1.11
C1orf43-201ENST00000350592 TTC21BQ7Z4L5 1316 aa21.99■■□□□ 1.11
C1orf43-201ENST00000350592 SHPRHQ149N8 1683 aa21.99■■□□□ 1.11
C1orf43-201ENST00000350592 SSH2Q76I76 1423 aa21.99■■□□□ 1.11
C1orf43-201ENST00000350592 RGPD8O14715 1765 aaPredicted RBP21.98■■□□□ 1.11
C1orf43-201ENST00000350592 COG3Q96JB2 828 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms