RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 NEUROD6Q96NK8 337 aa22.74■■□□□ 1.23
UBE3C-201ENST00000348165 CABP1Q9NZU7 370 aa22.74■■□□□ 1.23
UBE3C-201ENST00000348165 NOL10Q9BSC4 688 aaKnown RBP22.74■■□□□ 1.23
UBE3C-201ENST00000348165 HFM1A2PYH4 1435 aa22.73■■□□□ 1.23
UBE3C-201ENST00000348165 TROQ12816 1431 aaPredicted RBP22.73■■□□□ 1.23
UBE3C-201ENST00000348165 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
UBE3C-201ENST00000348165 UBTFL1P0CB47 393 aaPredicted RBP22.72■■□□□ 1.23
UBE3C-201ENST00000348165 CHMP4CQ96CF2 233 aa22.72■■□□□ 1.23
UBE3C-201ENST00000348165 SLC26A8Q96RN1 970 aa22.72■■□□□ 1.23
UBE3C-201ENST00000348165 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
UBE3C-201ENST00000348165 HSP90AB4PQ58FF6 505 aa22.71■■□□□ 1.23
UBE3C-201ENST00000348165 CDK19Q9BWU1 502 aa22.71■■□□□ 1.23
UBE3C-201ENST00000348165 CPLX1O14810 134 aa22.71■■□□□ 1.23
UBE3C-201ENST00000348165 PRKCSHP14314 528 aaPredicted RBP22.71■■□□□ 1.23
UBE3C-201ENST00000348165 THEMISQ8N1K5 641 aaPredicted RBP22.71■■□□□ 1.23
UBE3C-201ENST00000348165 PES1O00541 588 aaKnown RBP22.71■■□□□ 1.23
UBE3C-201ENST00000348165 EXOSC9Q06265 439 aaKnown RBP22.71■■□□□ 1.23
UBE3C-201ENST00000348165 KIAA1107Q9UPP5 1409 aa22.7■■□□□ 1.22
UBE3C-201ENST00000348165 SLC52A1Q9NWF4 448 aa22.7■■□□□ 1.22
UBE3C-201ENST00000348165 SNAPC4Q5SXM2 1469 aa22.7■■□□□ 1.22
UBE3C-201ENST00000348165 FBXW7Q969H0 707 aa22.69■■□□□ 1.22
UBE3C-201ENST00000348165 TRDNQ13061 729 aa22.69■■□□□ 1.22
UBE3C-201ENST00000348165 AMOTL1Q8IY63 956 aa22.69■■□□□ 1.22
UBE3C-201ENST00000348165 GAS2L2Q8NHY3 880 aa22.69■■□□□ 1.22
UBE3C-201ENST00000348165 FANCIQ9NVI1 1328 aa22.69■■□□□ 1.22
UBE3C-201ENST00000348165 RNF20Q5VTR2 975 aa22.68■■□□□ 1.22
UBE3C-201ENST00000348165 PDE4CQ08493 712 aa22.68■■□□□ 1.22
UBE3C-201ENST00000348165 INTS3Q68E01 1043 aaKnown RBP22.67■■□□□ 1.22
UBE3C-201ENST00000348165 SULT6B1Q6IMI4 303 aa22.67■■□□□ 1.22
UBE3C-201ENST00000348165 STRN4Q9NRL3 753 aa22.67■■□□□ 1.22
UBE3C-201ENST00000348165 ERC2O15083 957 aa22.66■■□□□ 1.22
UBE3C-201ENST00000348165 GSE1Q14687 1217 aa22.66■■□□□ 1.22
UBE3C-201ENST00000348165 CC2D2AQ9P2K1 1620 aa22.66■■□□□ 1.22
UBE3C-201ENST00000348165 NOC3LQ8WTT2 800 aaKnown RBP22.66■■□□□ 1.22
UBE3C-201ENST00000348165 TSR2Q969E8 191 aaKnown RBP22.66■■□□□ 1.22
UBE3C-201ENST00000348165 FAM177BA6PVY3 158 aa22.65■■□□□ 1.22
UBE3C-201ENST00000348165 BECN2A8MW95 431 aa22.65■■□□□ 1.22
UBE3C-201ENST00000348165 PLEKHO1Q53GL0 409 aaPredicted RBP22.65■■□□□ 1.22
UBE3C-201ENST00000348165 TRIM34Q9BYJ4 488 aa22.65■■□□□ 1.22
UBE3C-201ENST00000348165 DHX16O60231 1041 aaKnown RBP22.65■■□□□ 1.22
UBE3C-201ENST00000348165 TPD52L1Q16890 204 aaPredicted RBP22.65■■□□□ 1.22
UBE3C-201ENST00000348165 TRIM29Q14134 588 aa22.65■■□□□ 1.22
UBE3C-201ENST00000348165 CCDC30Q5VVM6 783 aa22.65■■□□□ 1.22
UBE3C-201ENST00000348165 TWISTNBQ3B726 338 aaPredicted RBP22.64■■□□□ 1.22
UBE3C-201ENST00000348165 SURF6O75683 361 aaKnown RBP22.64■■□□□ 1.21
UBE3C-201ENST00000348165 WASHC4Q2M389 1173 aa22.63■■□□□ 1.21
UBE3C-201ENST00000348165 EFCAB5A4FU69 1503 aa22.63■■□□□ 1.21
UBE3C-201ENST00000348165 VPS37CA5D8V6 355 aaPredicted RBP22.63■■□□□ 1.21
UBE3C-201ENST00000348165 GOLGA6L19H0YKK7 550 aa22.63■■□□□ 1.21
UBE3C-201ENST00000348165 NFXL1Q6ZNB6 911 aa22.62■■□□□ 1.21
UBE3C-201ENST00000348165 C22orf23Q9BZE7 217 aa22.62■■□□□ 1.21
UBE3C-201ENST00000348165 PLEKHH2Q8IVE3 1493 aa22.62■■□□□ 1.21
UBE3C-201ENST00000348165 RBM42Q9BTD8 480 aaKnown RBP22.62■■□□□ 1.21
UBE3C-201ENST00000348165 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.62■■□□□ 1.21
UBE3C-201ENST00000348165 EHBP1L1Q8N3D4 1523 aa22.61■■□□□ 1.21
UBE3C-201ENST00000348165 SKOR2Q2VWA4 1001 aaPredicted RBP22.61■■□□□ 1.21
UBE3C-201ENST00000348165 RBM33Q96EV2 1170 aaKnown RBP22.61■■□□□ 1.21
UBE3C-201ENST00000348165 GNAI3P08754 354 aa22.61■■□□□ 1.21
UBE3C-201ENST00000348165 ZNF692Q9BU19 519 aaPredicted RBP22.6■■□□□ 1.21
UBE3C-201ENST00000348165 CLASRPQ8N2M8 674 aaKnown RBP22.6■■□□□ 1.21
UBE3C-201ENST00000348165 C1orf115Q9H7X2 142 aa22.6■■□□□ 1.21
UBE3C-201ENST00000348165 AAMPQ13685 434 aa22.59■■□□□ 1.21
UBE3C-201ENST00000348165 KLHL34Q8N239 644 aa22.59■■□□□ 1.21
UBE3C-201ENST00000348165 CHMP5Q9NZZ3 219 aa22.59■■□□□ 1.21
UBE3C-201ENST00000348165 TPM3P06753 285 aa22.59■■□□□ 1.21
UBE3C-201ENST00000348165 FOSBP53539 338 aa22.59■■□□□ 1.21
UBE3C-201ENST00000348165 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
UBE3C-201ENST00000348165 SMC3Q9UQE7 1217 aa22.59■■□□□ 1.21
UBE3C-201ENST00000348165 PKNOX2Q96KN3 472 aa22.58■■□□□ 1.21
UBE3C-201ENST00000348165 TOP2BQ02880 1626 aa22.58■■□□□ 1.21
UBE3C-201ENST00000348165 ZNF428Q96B54 188 aa22.58■■□□□ 1.21
UBE3C-201ENST00000348165 BCAR3O75815 825 aa22.58■■□□□ 1.2
UBE3C-201ENST00000348165 SLC4A2P04920 1241 aa22.57■■□□□ 1.2
UBE3C-201ENST00000348165 BICD2Q8TD16 824 aa22.57■■□□□ 1.2
UBE3C-201ENST00000348165 TATP17735 454 aaPredicted RBP22.57■■□□□ 1.2
UBE3C-201ENST00000348165 DAPK1P53355 1430 aa22.57■■□□□ 1.2
UBE3C-201ENST00000348165 HDGFL1Q5TGJ6 251 aa22.57■■□□□ 1.2
UBE3C-201ENST00000348165 FYB1O15117 783 aa22.56■■□□□ 1.2
UBE3C-201ENST00000348165 RALYLQ86SE5 291 aaKnown RBP22.56■■□□□ 1.2
UBE3C-201ENST00000348165 ERICH2A1L162 156 aa22.56■■□□□ 1.2
UBE3C-201ENST00000348165 CDC45O75419 566 aa22.56■■□□□ 1.2
UBE3C-201ENST00000348165 CCDC27Q2M243 656 aa22.56■■□□□ 1.2
UBE3C-201ENST00000348165 ANO8Q9HCE9 1232 aaPredicted RBP22.56■■□□□ 1.2
UBE3C-201ENST00000348165 ANKLE2Q86XL3 938 aa22.55■■□□□ 1.2
UBE3C-201ENST00000348165 ERBINQ96RT1 1412 aa22.55■■□□□ 1.2
UBE3C-201ENST00000348165 RRS1Q15050 365 aaKnown RBP22.55■■□□□ 1.2
UBE3C-201ENST00000348165 NOB1Q9ULX3 412 aaKnown RBP22.55■■□□□ 1.2
UBE3C-201ENST00000348165 RTEL1-TNFRSF6BF6WH68 1400 aa22.55■■□□□ 1.2
UBE3C-201ENST00000348165 ZNF530Q6P9A1 599 aaPredicted RBP22.55■■□□□ 1.2
UBE3C-201ENST00000348165 PNISRQ8TF01 805 aaKnown RBP22.55■■□□□ 1.2
UBE3C-201ENST00000348165 FSD1Q9BTV5 496 aa22.55■■□□□ 1.2
UBE3C-201ENST00000348165 DDX54Q8TDD1 881 aaKnown RBP22.54■■□□□ 1.2
UBE3C-201ENST00000348165 CTDP1Q9Y5B0 961 aaPredicted RBP22.54■■□□□ 1.2
UBE3C-201ENST00000348165 SAMD1Q6SPF0 538 aaPredicted RBP22.54■■□□□ 1.2
UBE3C-201ENST00000348165 XPCQ01831 940 aaPredicted RBP22.53■■□□□ 1.2
UBE3C-201ENST00000348165 TOM1L2Q6ZVM7 507 aa22.53■■□□□ 1.2
UBE3C-201ENST00000348165 HMGXB3Q12766 1538 aa22.53■■□□□ 1.2
UBE3C-201ENST00000348165 CEP89Q96ST8 783 aa22.53■■□□□ 1.2
UBE3C-201ENST00000348165 CDK13Q14004 1512 aaKnown RBP22.52■■□□□ 1.2
UBE3C-201ENST00000348165 TSR1Q2NL82 804 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms