RNA–Protein interactions for RNA: ENST00000344100.7

CACNA1C-203, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-203ENST00000344100 SNAPC4Q5SXM2 1469 aa13.84□□□□□ -0.19
CACNA1C-203ENST00000344100 ZKSCAN1P17029 563 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-203ENST00000344100 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
CACNA1C-203ENST00000344100 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
CACNA1C-203ENST00000344100 PAXIP1Q6ZW49 1069 aaPredicted RBP13.84□□□□□ -0.19
CACNA1C-203ENST00000344100 MTMR7Q9Y216 660 aa13.84□□□□□ -0.19
CACNA1C-203ENST00000344100 SLC3A2P08195 630 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-203ENST00000344100 GGNBP2Q9H3C7 697 aa13.84□□□□□ -0.19
CACNA1C-203ENST00000344100 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
CACNA1C-203ENST00000344100 RNF20Q5VTR2 975 aa13.83□□□□□ -0.19
CACNA1C-203ENST00000344100 PCMTD1Q96MG8 357 aaPredicted RBP13.83□□□□□ -0.2
CACNA1C-203ENST00000344100 ERC2O15083 957 aa13.82□□□□□ -0.2
CACNA1C-203ENST00000344100 CNNM1Q9NRU3 951 aa13.82□□□□□ -0.2
CACNA1C-203ENST00000344100 WDHD1O75717 1129 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-203ENST00000344100 PRAM1Q96QH2 718 aa13.82□□□□□ -0.2
CACNA1C-203ENST00000344100 TPM1P09493 284 aa13.81□□□□□ -0.2
CACNA1C-203ENST00000344100 BRMS1Q9HCU9 246 aa13.81□□□□□ -0.2
CACNA1C-203ENST00000344100 IGF1RP08069 1367 aa13.81□□□□□ -0.2
CACNA1C-203ENST00000344100 SCAPERQ9BY12 1400 aa13.81□□□□□ -0.2
CACNA1C-203ENST00000344100 PHF14O94880 888 aa13.81□□□□□ -0.2
CACNA1C-203ENST00000344100 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-203ENST00000344100 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-203ENST00000344100 RALYLQ86SE5 291 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-203ENST00000344100 RUNDC1Q96C34 613 aa13.8□□□□□ -0.2
CACNA1C-203ENST00000344100 ZNF644Q9H582 1327 aaPredicted RBP13.8□□□□□ -0.2
CACNA1C-203ENST00000344100 RAPGEF3O95398 923 aa13.8□□□□□ -0.2
CACNA1C-203ENST00000344100 NESP48681 1621 aa13.8□□□□□ -0.2
CACNA1C-203ENST00000344100 ANKRD50Q9ULJ7 1429 aa13.79□□□□□ -0.2
CACNA1C-203ENST00000344100 SAFBQ15424 915 aaKnown RBP eCLIP13.79□□□□□ -0.2
CACNA1C-203ENST00000344100 CCDC30Q5VVM6 783 aa13.79□□□□□ -0.2
CACNA1C-203ENST00000344100 UBTFL1P0CB47 393 aaPredicted RBP13.79□□□□□ -0.2
CACNA1C-203ENST00000344100 SLC26A8Q96RN1 970 aa13.79□□□□□ -0.2
CACNA1C-203ENST00000344100 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.79□□□□□ -0.21e-7■■■■■ 115.4
CACNA1C-203ENST00000344100 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
CACNA1C-203ENST00000344100 HOOK1Q9UJC3 728 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-203ENST00000344100 TTC39AQ5SRH9 613 aa13.78□□□□□ -0.2
CACNA1C-203ENST00000344100 SLKQ9H2G2 1235 aaPredicted RBP13.78□□□□□ -0.2
CACNA1C-203ENST00000344100 NGLY1Q96IV0 654 aa13.78□□□□□ -0.2
CACNA1C-203ENST00000344100 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
CACNA1C-203ENST00000344100 ATP2B2Q01814 1243 aa13.78□□□□□ -0.2
CACNA1C-203ENST00000344100 XPCQ01831 940 aaPredicted RBP13.78□□□□□ -0.2
CACNA1C-203ENST00000344100 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
CACNA1C-203ENST00000344100 ATP6V1DQ9Y5K8 247 aa13.78□□□□□ -0.2
CACNA1C-203ENST00000344100 ANKRD20A12PQ8NF67 263 aa13.77□□□□□ -0.2
CACNA1C-203ENST00000344100 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.2
CACNA1C-203ENST00000344100 CDK19Q9BWU1 502 aa13.77□□□□□ -0.21
CACNA1C-203ENST00000344100 XBP1P17861 261 aa13.77□□□□□ -0.21
CACNA1C-203ENST00000344100 SLC52A1Q9NWF4 448 aa13.76□□□□□ -0.21
CACNA1C-203ENST00000344100 APAF1O14727 1248 aa13.76□□□□□ -0.21
CACNA1C-203ENST00000344100 RTEL1-TNFRSF6BF6WH68 1400 aa13.76□□□□□ -0.21
CACNA1C-203ENST00000344100 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-203ENST00000344100 MTHFSP49914 203 aa13.75□□□□□ -0.21
CACNA1C-203ENST00000344100 GOLGA6L1Q8N7Z2 621 aa13.75□□□□□ -0.21
CACNA1C-203ENST00000344100 NINLQ9Y2I6 1382 aa13.75□□□□□ -0.21
CACNA1C-203ENST00000344100 ZPR1O75312 459 aa13.75□□□□□ -0.21
CACNA1C-203ENST00000344100 PNISRQ8TF01 805 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-203ENST00000344100 ZNF530Q6P9A1 599 aaPredicted RBP13.74□□□□□ -0.21
CACNA1C-203ENST00000344100 TMOD2Q9NZR1 351 aa13.74□□□□□ -0.21
CACNA1C-203ENST00000344100 REC8O95072 547 aa13.74□□□□□ -0.21
CACNA1C-203ENST00000344100 CCDC158Q5M9N0 1113 aa13.74□□□□□ -0.21
CACNA1C-203ENST00000344100 ZSCAN29Q8IWY8 852 aaPredicted RBP13.74□□□□□ -0.21
CACNA1C-203ENST00000344100 MPHOSPH10O00566 681 aaKnown RBP13.74□□□□□ -0.21
CACNA1C-203ENST00000344100 PAF1Q8N7H5 531 aa13.74□□□□□ -0.21
CACNA1C-203ENST00000344100 ODF2Q5BJF6 829 aa13.73□□□□□ -0.21
CACNA1C-203ENST00000344100 GZF1Q9H116 711 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-203ENST00000344100 MPHOSPH8Q99549 860 aa13.73□□□□□ -0.21
CACNA1C-203ENST00000344100 TTLL12Q14166 644 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-203ENST00000344100 GOLGA6L19H0YKK7 550 aa13.73□□□□□ -0.21
CACNA1C-203ENST00000344100 DZIP1LQ8IYY4 767 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-203ENST00000344100 DNAJC2Q99543 621 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-203ENST00000344100 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
CACNA1C-203ENST00000344100 CT47A1Q5JQC4 288 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-203ENST00000344100 ZNF652Q9Y2D9 606 aa13.72□□□□□ -0.21
CACNA1C-203ENST00000344100 RUSC2Q8N2Y8 1516 aa13.72□□□□□ -0.21
CACNA1C-203ENST00000344100 EPS15P42566 896 aa13.71□□□□□ -0.21
CACNA1C-203ENST00000344100 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.21
CACNA1C-203ENST00000344100 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.21
CACNA1C-203ENST00000344100 FOSBP53539 338 aa13.71□□□□□ -0.21
CACNA1C-203ENST00000344100 CFAP70Q5T0N1 1121 aa13.71□□□□□ -0.21
CACNA1C-203ENST00000344100 ZC3H6P61129 1189 aaKnown RBP13.71□□□□□ -0.22
CACNA1C-203ENST00000344100 CD109Q6YHK3 1445 aa13.71□□□□□ -0.22
CACNA1C-203ENST00000344100 LRPPRCP42704 1394 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-203ENST00000344100 NCOA2Q15596 1464 aa13.7□□□□□ -0.22
CACNA1C-203ENST00000344100 BECN2A8MW95 431 aa13.7□□□□□ -0.22
CACNA1C-203ENST00000344100 FSD1Q9BTV5 496 aa13.7□□□□□ -0.22
CACNA1C-203ENST00000344100 HECW1Q76N89 1606 aa13.7□□□□□ -0.22
CACNA1C-203ENST00000344100 STARD3NLO95772 234 aa13.7□□□□□ -0.22
CACNA1C-203ENST00000344100 COG6Q9Y2V7 657 aa13.7□□□□□ -0.22
CACNA1C-203ENST00000344100 IPO7O95373 1038 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 MYL6BP14649 208 aa13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 KCNH5Q8NCM2 988 aa13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 CASKIN1Q8WXD9 1431 aa13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 UBAP1LF5GYI3 381 aa13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 RRP12Q5JTH9 1297 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 CDK5RAP3Q96JB5 506 aa13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 CCDC70Q6NSX1 233 aa13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 KIF21BO75037 1637 aa13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 EPRSP07814 1512 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-203ENST00000344100 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms