RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 XPCQ01831 940 aaPredicted RBP18.6■□□□□ 0.57
CLCN1-201ENST00000343257 RIPK4P57078 832 aa18.6■□□□□ 0.57
CLCN1-201ENST00000343257 ABCC2Q92887 1545 aa18.59■□□□□ 0.57
CLCN1-201ENST00000343257 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
CLCN1-201ENST00000343257 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLCN1-201ENST00000343257 ZSCAN30Q86W11 494 aa18.59■□□□□ 0.57
CLCN1-201ENST00000343257 EXOSC9Q06265 439 aaKnown RBP18.58■□□□□ 0.57
CLCN1-201ENST00000343257 RAB3GAP1Q15042 981 aa18.58■□□□□ 0.57
CLCN1-201ENST00000343257 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.57
CLCN1-201ENST00000343257 TRIM27P14373 513 aa18.58■□□□□ 0.57
CLCN1-201ENST00000343257 MTHFSP49914 203 aa18.58■□□□□ 0.57
CLCN1-201ENST00000343257 CCDC173Q0VFZ6 552 aa18.58■□□□□ 0.57
CLCN1-201ENST00000343257 ABCC10Q5T3U5 1492 aa18.57■□□□□ 0.56
CLCN1-201ENST00000343257 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
CLCN1-201ENST00000343257 DDIT3P35638 169 aa18.56■□□□□ 0.56
CLCN1-201ENST00000343257 GAS2L2Q8NHY3 880 aa18.56■□□□□ 0.56
CLCN1-201ENST00000343257 SLC12A5Q9H2X9 1139 aa18.56■□□□□ 0.56
CLCN1-201ENST00000343257 PRDM10Q9NQV6 1147 aa18.56■□□□□ 0.56
CLCN1-201ENST00000343257 ATP10BO94823 1461 aa18.56■□□□□ 0.56
CLCN1-201ENST00000343257 MCTP1Q6DN14 999 aa18.56■□□□□ 0.56
CLCN1-201ENST00000343257 CAVIN1Q6NZI2 390 aaKnown RBP18.56■□□□□ 0.56
CLCN1-201ENST00000343257 ISY1Q9ULR0 285 aaKnown RBP18.56■□□□□ 0.56
CLCN1-201ENST00000343257 NOB1Q9ULX3 412 aaKnown RBP18.56■□□□□ 0.56
CLCN1-201ENST00000343257 SKOR2Q2VWA4 1001 aaPredicted RBP18.56■□□□□ 0.56
CLCN1-201ENST00000343257 SMC5Q8IY18 1101 aa18.56■□□□□ 0.56
CLCN1-201ENST00000343257 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
CLCN1-201ENST00000343257 PODXL2Q9NZ53 605 aa18.56■□□□□ 0.56
CLCN1-201ENST00000343257 OFD1O75665 1012 aa18.55■□□□□ 0.56
CLCN1-201ENST00000343257 SSH1Q8WYL5 1049 aa18.55■□□□□ 0.56
CLCN1-201ENST00000343257 A0A0U1RQG5 324 aaPredicted RBP18.55■□□□□ 0.56
CLCN1-201ENST00000343257 PLEKHG5O94827 1062 aa18.55■□□□□ 0.56
CLCN1-201ENST00000343257 C1orf115Q9H7X2 142 aa18.55■□□□□ 0.56
CLCN1-201ENST00000343257 MYO5CQ9NQX4 1742 aa18.54■□□□□ 0.56
CLCN1-201ENST00000343257 GOLGA6L22H0YM25 854 aa18.54■□□□□ 0.56
CLCN1-201ENST00000343257 ANKRD45Q5TZF3 282 aa18.54■□□□□ 0.56
CLCN1-201ENST00000343257 GRIN2AQ12879 1464 aa18.53■□□□□ 0.56
CLCN1-201ENST00000343257 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
CLCN1-201ENST00000343257 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
CLCN1-201ENST00000343257 CHAMP1Q96JM3 812 aa18.53■□□□□ 0.56
CLCN1-201ENST00000343257 NGEFQ8N5V2 710 aa18.53■□□□□ 0.56
CLCN1-201ENST00000343257 AAMPQ13685 434 aa18.52■□□□□ 0.56
CLCN1-201ENST00000343257 FOXD4L5Q5VV16 416 aaPredicted RBP18.52■□□□□ 0.56
CLCN1-201ENST00000343257 FOXD4L4Q8WXT5 416 aaPredicted RBP18.52■□□□□ 0.56
CLCN1-201ENST00000343257 SCAF11Q99590 1463 aaKnown RBP18.52■□□□□ 0.56
CLCN1-201ENST00000343257 NUP160Q12769 1436 aa18.52■□□□□ 0.56
CLCN1-201ENST00000343257 UQCRHLA0A096LP55 91 aa18.52■□□□□ 0.56
CLCN1-201ENST00000343257 UQCRHP07919 91 aa18.52■□□□□ 0.56
CLCN1-201ENST00000343257 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.52■□□□□ 0.56
CLCN1-201ENST00000343257 EIF2AK4Q9P2K8 1649 aaKnown RBP18.52■□□□□ 0.55
CLCN1-201ENST00000343257 RBM25P49756 843 aaKnown RBP18.52■□□□□ 0.55
CLCN1-201ENST00000343257 MPNDQ8N594 471 aa18.52■□□□□ 0.55
CLCN1-201ENST00000343257 SNX21Q969T3 373 aa18.51■□□□□ 0.55
CLCN1-201ENST00000343257 KIF2CQ99661 725 aa18.51■□□□□ 0.55
CLCN1-201ENST00000343257 RBM27Q9P2N5 1060 aaKnown RBP18.51■□□□□ 0.55
CLCN1-201ENST00000343257 CARMIL2Q6F5E8 1435 aa18.51■□□□□ 0.55
CLCN1-201ENST00000343257 K7ELQ4 463 aaPredicted RBP18.51■□□□□ 0.55
CLCN1-201ENST00000343257 BAG4O95429 457 aaKnown RBP18.51■□□□□ 0.55
CLCN1-201ENST00000343257 PPP1R9BQ96SB3 815 aa18.5■□□□□ 0.55
CLCN1-201ENST00000343257 DDX19BQ9UMR2 479 aa18.5■□□□□ 0.55
CLCN1-201ENST00000343257 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
CLCN1-201ENST00000343257 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
CLCN1-201ENST00000343257 TRAK1Q9UPV9 953 aa18.5■□□□□ 0.55
CLCN1-201ENST00000343257 ATF7IPQ6VMQ6 1270 aa18.49■□□□□ 0.55
CLCN1-201ENST00000343257 RBSNQ9H1K0 784 aa18.49■□□□□ 0.55
CLCN1-201ENST00000343257 CIZ1Q9ULV3 898 aaPredicted RBP18.49■□□□□ 0.55
CLCN1-201ENST00000343257 SYNMO15061 1565 aa18.49■□□□□ 0.55
CLCN1-201ENST00000343257 HDAC1Q13547 482 aaPredicted RBP18.49■□□□□ 0.55
CLCN1-201ENST00000343257 PKP1Q13835 747 aa18.48■□□□□ 0.55
CLCN1-201ENST00000343257 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
CLCN1-201ENST00000343257 LAMC1P11047 1609 aa18.48■□□□□ 0.55
CLCN1-201ENST00000343257 NSD3Q9BZ95 1437 aa18.48■□□□□ 0.55
CLCN1-201ENST00000343257 CALD1Q05682 793 aaKnown RBP18.48■□□□□ 0.55
CLCN1-201ENST00000343257 CHD1LQ86WJ1 897 aa18.48■□□□□ 0.55
CLCN1-201ENST00000343257 SYCP2Q9BX26 1530 aa18.48■□□□□ 0.55
CLCN1-201ENST00000343257 POLR3AO14802 1390 aaPredicted RBP18.48■□□□□ 0.55
CLCN1-201ENST00000343257 PRDM4Q9UKN5 801 aa18.48■□□□□ 0.55
CLCN1-201ENST00000343257 ZHX1Q9UKY1 873 aaPredicted RBP18.48■□□□□ 0.55
CLCN1-201ENST00000343257 RSPH4AQ5TD94 716 aa18.47■□□□□ 0.55
CLCN1-201ENST00000343257 RNF214Q8ND24 703 aa18.47■□□□□ 0.55
CLCN1-201ENST00000343257 JARID2Q92833 1246 aaPredicted RBP18.47■□□□□ 0.55
CLCN1-201ENST00000343257 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
CLCN1-201ENST00000343257 NCOA3Q9Y6Q9 1424 aa18.47■□□□□ 0.55
CLCN1-201ENST00000343257 TBC1D9Q6ZT07 1266 aa18.46■□□□□ 0.55
CLCN1-201ENST00000343257 ADGRF5Q8IZF2 1346 aa18.46■□□□□ 0.55
CLCN1-201ENST00000343257 PRIM1P49642 420 aaKnown RBP18.46■□□□□ 0.55
CLCN1-201ENST00000343257 TPRNQ4KMQ1 711 aa18.46■□□□□ 0.55
CLCN1-201ENST00000343257 ZMYM3Q14202 1370 aa18.46■□□□□ 0.55
CLCN1-201ENST00000343257 NUCB1Q02818 461 aa18.46■□□□□ 0.55
CLCN1-201ENST00000343257 SAMD9LQ8IVG5 1584 aa18.46■□□□□ 0.54
CLCN1-201ENST00000343257 PRPF40AO75400 957 aaKnown RBP18.45■□□□□ 0.54
CLCN1-201ENST00000343257 KLHL40Q2TBA0 621 aa18.45■□□□□ 0.54
CLCN1-201ENST00000343257 ZSCAN23Q3MJ62 389 aa18.45■□□□□ 0.54
CLCN1-201ENST00000343257 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
CLCN1-201ENST00000343257 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
CLCN1-201ENST00000343257 TSC1Q92574 1164 aa18.43■□□□□ 0.54
CLCN1-201ENST00000343257 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.43■□□□□ 0.54
CLCN1-201ENST00000343257 AK9Q5TCS8 1911 aa18.43■□□□□ 0.54
CLCN1-201ENST00000343257 ELL2O00472 640 aaPredicted RBP18.42■□□□□ 0.54
CLCN1-201ENST00000343257 PLXNC1O60486 1568 aa18.42■□□□□ 0.54
CLCN1-201ENST00000343257 ARHGAP5Q13017 1502 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms