RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 MRS2Q9HD23 443 aa28.95■■■□□ 2.23
VRK2-201ENST00000340157 WAPLQ7Z5K2 1190 aa28.95■■■□□ 2.22
VRK2-201ENST00000340157 AMER1Q5JTC6 1135 aaPredicted RBP28.93■■■□□ 2.22
VRK2-201ENST00000340157 CC2D1BQ5T0F9 858 aaKnown RBP28.93■■■□□ 2.22
VRK2-201ENST00000340157 CABP2Q9NPB3 220 aa28.92■■■□□ 2.22
VRK2-201ENST00000340157 MYBBP1AQ9BQG0 1328 aaKnown RBP28.92■■■□□ 2.22
VRK2-201ENST00000340157 CARD14Q9BXL6 1004 aa28.91■■■□□ 2.22
VRK2-201ENST00000340157 FAM135BQ49AJ0 1406 aa28.91■■■□□ 2.22
VRK2-201ENST00000340157 DIP2AQ14689 1571 aa28.91■■■□□ 2.22
VRK2-201ENST00000340157 SLC26A8Q96RN1 970 aa28.91■■■□□ 2.22
VRK2-201ENST00000340157 SLC12A5Q9H2X9 1139 aa28.91■■■□□ 2.22
VRK2-201ENST00000340157 KNSTRNQ9Y448 316 aa28.91■■■□□ 2.22
VRK2-201ENST00000340157 PTPRUQ92729 1446 aa28.91■■■□□ 2.22
VRK2-201ENST00000340157 SIRT1Q96EB6 747 aa28.88■■■□□ 2.21
VRK2-201ENST00000340157 ROBO2Q9HCK4 1378 aa28.87■■■□□ 2.21
VRK2-201ENST00000340157 NPC1L1Q9UHC9 1359 aa28.87■■■□□ 2.21
VRK2-201ENST00000340157 TMC1Q8TDI8 760 aa28.87■■■□□ 2.21
VRK2-201ENST00000340157 TBX22Q9Y458 520 aa28.86■■■□□ 2.21
VRK2-201ENST00000340157 SRPK2P78362 688 aaKnown RBP28.84■■■□□ 2.21
VRK2-201ENST00000340157 BRD4O60885 1362 aaPredicted RBP28.83■■■□□ 2.21
VRK2-201ENST00000340157 CDK19Q9BWU1 502 aa28.83■■■□□ 2.2
VRK2-201ENST00000340157 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.82■■■□□ 2.2
VRK2-201ENST00000340157 ATAD2Q6PL18 1390 aa28.82■■■□□ 2.2
VRK2-201ENST00000340157 USP32Q8NFA0 1604 aa28.82■■■□□ 2.2
VRK2-201ENST00000340157 XRN1Q8IZH2 1706 aaKnown RBP28.82■■■□□ 2.2
VRK2-201ENST00000340157 NSD3Q9BZ95 1437 aa28.81■■■□□ 2.2
VRK2-201ENST00000340157 ANKRD36BQ8N2N9 1353 aa28.8■■■□□ 2.2
VRK2-201ENST00000340157 FAM9BQ8IZU0 186 aa28.8■■■□□ 2.2
VRK2-201ENST00000340157 NINLQ9Y2I6 1382 aa28.8■■■□□ 2.2
VRK2-201ENST00000340157 NLRP13Q86W25 1043 aa28.79■■■□□ 2.2
VRK2-201ENST00000340157 CD163L1Q9NR16 1453 aa28.78■■■□□ 2.2
VRK2-201ENST00000340157 ADGRB2O60241 1585 aa28.78■■■□□ 2.2
VRK2-201ENST00000340157 ANKLE2Q86XL3 938 aa28.77■■■□□ 2.2
VRK2-201ENST00000340157 PNISRQ8TF01 805 aaKnown RBP28.76■■■□□ 2.19
VRK2-201ENST00000340157 PTCH1Q13635 1447 aa28.75■■■□□ 2.19
VRK2-201ENST00000340157 AMOTL2Q9Y2J4 779 aa28.75■■■□□ 2.19
VRK2-201ENST00000340157 A0A1W2PP64 1363 aa28.75■■■□□ 2.19
VRK2-201ENST00000340157 WASLO00401 505 aaPredicted RBP28.74■■■□□ 2.19
VRK2-201ENST00000340157 CHD2O14647 1828 aaKnown RBP28.72■■■□□ 2.19
VRK2-201ENST00000340157 PIK3R4Q99570 1358 aa28.71■■■□□ 2.19
VRK2-201ENST00000340157 PPP2R1AP30153 589 aa28.7■■■□□ 2.19
VRK2-201ENST00000340157 HNRNPUQ00839 825 aaKnown RBP eCLIP28.7■■■□□ 2.18
VRK2-201ENST00000340157 CABP1Q9NZU7 370 aa28.68■■■□□ 2.18
VRK2-201ENST00000340157 NPHP4O75161 1426 aaPredicted RBP28.66■■■□□ 2.18
VRK2-201ENST00000340157 ATP7BP35670 1465 aa28.66■■■□□ 2.18
VRK2-201ENST00000340157 KCNA6P17658 529 aa28.64■■■□□ 2.18
VRK2-201ENST00000340157 CGNL1Q0VF96 1302 aa28.64■■■□□ 2.18
VRK2-201ENST00000340157 TOPAZ1Q8N9V7 1692 aa28.64■■■□□ 2.18
VRK2-201ENST00000340157 KDM4FA0A1W2PPD8 638 aa28.63■■■□□ 2.17
VRK2-201ENST00000340157 TERF2IPQ9NYB0 399 aa28.63■■■□□ 2.17
VRK2-201ENST00000340157 PRR36Q9H6K5 1346 aa28.63■■■□□ 2.17
VRK2-201ENST00000340157 PPIP5K1Q6PFW1 1433 aa28.63■■■□□ 2.17
VRK2-201ENST00000340157 NUDT16Q96DE0 195 aaKnown RBP28.61■■■□□ 2.17
VRK2-201ENST00000340157 ANKRD26Q9UPS8 1709 aa28.61■■■□□ 2.17
VRK2-201ENST00000340157 NCKAP5LQ9HCH0 1330 aa28.61■■■□□ 2.17
VRK2-201ENST00000340157 CDC42BPGQ6DT37 1551 aa28.6■■■□□ 2.17
VRK2-201ENST00000340157 AKAP12Q02952 1782 aa28.6■■■□□ 2.17
VRK2-201ENST00000340157 NSD2O96028 1365 aa28.6■■■□□ 2.17
VRK2-201ENST00000340157 KIF20BQ96Q89 1820 aa28.59■■■□□ 2.17
VRK2-201ENST00000340157 CPSF1Q10570 1443 aaKnown RBP28.59■■■□□ 2.17
VRK2-201ENST00000340157 MON2Q7Z3U7 1717 aa28.58■■■□□ 2.17
VRK2-201ENST00000340157 HDGFL2Q7Z4V5 671 aaPredicted RBP28.57■■■□□ 2.16
VRK2-201ENST00000340157 ITSN1Q15811 1721 aa28.57■■■□□ 2.16
VRK2-201ENST00000340157 CCDC61Q9Y6R9 512 aa28.56■■■□□ 2.16
VRK2-201ENST00000340157 MORC1Q86VD1 984 aa28.55■■■□□ 2.16
VRK2-201ENST00000340157 RGPD8O14715 1765 aaPredicted RBP28.55■■■□□ 2.16
VRK2-201ENST00000340157 NALCNQ8IZF0 1738 aa28.55■■■□□ 2.16
VRK2-201ENST00000340157 SCAF1Q9H7N4 1312 aaKnown RBP28.54■■■□□ 2.16
VRK2-201ENST00000340157 ZBED9Q6R2W3 1325 aa28.52■■■□□ 2.16
VRK2-201ENST00000340157 NWD1Q149M9 1564 aa28.52■■■□□ 2.16
VRK2-201ENST00000340157 FYB1O15117 783 aa28.51■■■□□ 2.15
VRK2-201ENST00000340157 NKTRP30414 1462 aaKnown RBP28.51■■■□□ 2.15
VRK2-201ENST00000340157 FMN2Q9NZ56 1722 aa28.5■■■□□ 2.15
VRK2-201ENST00000340157 GGNBP2Q9H3C7 697 aa28.49■■■□□ 2.15
VRK2-201ENST00000340157 TNNT2P45379 298 aaPredicted RBP28.49■■■□□ 2.15
VRK2-201ENST00000340157 BLMP54132 1417 aaPredicted RBP28.48■■■□□ 2.15
VRK2-201ENST00000340157 EDC4Q6P2E9 1401 aaKnown RBP28.48■■■□□ 2.15
VRK2-201ENST00000340157 NUTM2FA1L443 756 aa28.48■■■□□ 2.15
VRK2-201ENST00000340157 NRKQ7Z2Y5 1582 aa28.48■■■□□ 2.15
VRK2-201ENST00000340157 INSRP06213 1382 aa28.48■■■□□ 2.15
VRK2-201ENST00000340157 SHPRHQ149N8 1683 aa28.46■■■□□ 2.15
VRK2-201ENST00000340157 LMTK3Q96Q04 1460 aa28.46■■■□□ 2.15
VRK2-201ENST00000340157 GTF3C3Q9Y5Q9 886 aa28.45■■■□□ 2.15
VRK2-201ENST00000340157 POLR3AO14802 1390 aaPredicted RBP28.45■■■□□ 2.14
VRK2-201ENST00000340157 PLEKHG3A1L390 1219 aa28.44■■■□□ 2.14
VRK2-201ENST00000340157 HSPA2P54652 639 aa28.44■■■□□ 2.14
VRK2-201ENST00000340157 SENP3-EIF4A1A0A087X0R7 540 aa28.43■■■□□ 2.14
VRK2-201ENST00000340157 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.42■■■□□ 2.14
VRK2-201ENST00000340157 ADAMTS8Q9UP79 889 aa28.42■■■□□ 2.14
VRK2-201ENST00000340157 RBM33Q96EV2 1170 aaKnown RBP28.42■■■□□ 2.14
VRK2-201ENST00000340157 ANKARQ7Z5J8 1434 aa28.4■■■□□ 2.14
VRK2-201ENST00000340157 STRCP1A6NGW2 1772 aa28.4■■■□□ 2.14
VRK2-201ENST00000340157 ACEP12821 1306 aa28.4■■■□□ 2.14
VRK2-201ENST00000340157 ADGRL3Q9HAR2 1447 aa28.4■■■□□ 2.14
VRK2-201ENST00000340157 MTHFSP49914 203 aa28.39■■■□□ 2.14
VRK2-201ENST00000340157 STRCQ7RTU9 1775 aa28.38■■■□□ 2.13
VRK2-201ENST00000340157 ZNF692Q9BU19 519 aaPredicted RBP28.38■■■□□ 2.13
VRK2-201ENST00000340157 USP6P35125 1406 aa28.36■■■□□ 2.13
VRK2-201ENST00000340157 WDR43Q15061 677 aaKnown RBP eCLIP28.36■■■□□ 2.13
VRK2-201ENST00000340157 NME9Q86XW9 330 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms