RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
PTCH1-201ENST00000331920 ATP2B2Q01814 1243 aa19.69■□□□□ 0.74
PTCH1-201ENST00000331920 G3BP1Q13283 466 aaKnown RBP eCLIP19.69■□□□□ 0.74
PTCH1-201ENST00000331920 GOLGA6L10A0A0M3HER8 536 aa19.69■□□□□ 0.74
PTCH1-201ENST00000331920 TRIM5Q9C035 493 aa19.69■□□□□ 0.74
PTCH1-201ENST00000331920 SEPT11Q9NVA2 429 aaKnown RBP19.69■□□□□ 0.74
PTCH1-201ENST00000331920 FAM177A1Q8N128 213 aaPredicted RBP19.69■□□□□ 0.74
PTCH1-201ENST00000331920 DCAF8L1A6NGE4 600 aa19.69■□□□□ 0.74
PTCH1-201ENST00000331920 XBP1P17861 261 aa19.69■□□□□ 0.74
PTCH1-201ENST00000331920 CENPQQ7L2Z9 268 aaPredicted RBP19.68■□□□□ 0.74
PTCH1-201ENST00000331920 BCCIPQ9P287 314 aaKnown RBP eCLIP19.68■□□□□ 0.74
PTCH1-201ENST00000331920 CEBPZQ03701 1054 aaKnown RBP19.68■□□□□ 0.74
PTCH1-201ENST00000331920 MATR3P43243 847 aaKnown RBP eCLIP19.67■□□□□ 0.74
PTCH1-201ENST00000331920 INCENPQ9NQS7 918 aa19.67■□□□□ 0.74
PTCH1-201ENST00000331920 CCDC181Q5TID7 509 aa19.67■□□□□ 0.74
PTCH1-201ENST00000331920 PDE4AP27815 886 aa19.67■□□□□ 0.74
PTCH1-201ENST00000331920 HSP90AB4PQ58FF6 505 aa19.66■□□□□ 0.74
PTCH1-201ENST00000331920 DEF6Q9H4E7 631 aa19.66■□□□□ 0.74
PTCH1-201ENST00000331920 NASPP49321 788 aaPredicted RBP19.66■□□□□ 0.74
PTCH1-201ENST00000331920 FILIP1LQ4L180 1135 aa19.65■□□□□ 0.74
PTCH1-201ENST00000331920 CRBNQ96SW2 442 aa19.65■□□□□ 0.74
PTCH1-201ENST00000331920 CHMP5Q9NZZ3 219 aa19.65■□□□□ 0.74
PTCH1-201ENST00000331920 CCDC39Q9UFE4 941 aa19.65■□□□□ 0.74
PTCH1-201ENST00000331920 COG6Q9Y2V7 657 aa19.65■□□□□ 0.74
PTCH1-201ENST00000331920 TANGO6Q9C0B7 1094 aa19.64■□□□□ 0.74
PTCH1-201ENST00000331920 WDR70Q9NW82 654 aa19.64■□□□□ 0.73
PTCH1-201ENST00000331920 TAF3Q5VWG9 929 aa19.64■□□□□ 0.73
PTCH1-201ENST00000331920 BAZ1BQ9UIG0 1483 aaKnown RBP19.63■□□□□ 0.73
PTCH1-201ENST00000331920 AIMP1Q12904 312 aaKnown RBP19.63■□□□□ 0.73
PTCH1-201ENST00000331920 GIMAP7Q8NHV1 300 aa19.63■□□□□ 0.73
PTCH1-201ENST00000331920 FAM177BA6PVY3 158 aa19.63■□□□□ 0.73
PTCH1-201ENST00000331920 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.62■□□□□ 0.73
PTCH1-201ENST00000331920 SSR1P43307 286 aaKnown RBP19.62■□□□□ 0.73
PTCH1-201ENST00000331920 DNAJC2Q99543 621 aaKnown RBP19.62■□□□□ 0.73
PTCH1-201ENST00000331920 PUS7Q96PZ0 661 aaKnown RBP19.62■□□□□ 0.73
PTCH1-201ENST00000331920 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
PTCH1-201ENST00000331920 CCDC112Q8NEF3 446 aa19.61■□□□□ 0.73
PTCH1-201ENST00000331920 TRAK1Q9UPV9 953 aa19.61■□□□□ 0.73
PTCH1-201ENST00000331920 ERICH4A6NGS2 130 aa19.61■□□□□ 0.73
PTCH1-201ENST00000331920 PSMD1Q99460 953 aa19.61■□□□□ 0.73
PTCH1-201ENST00000331920 TXLNAP40222 546 aa19.6■□□□□ 0.73
PTCH1-201ENST00000331920 CEP63Q96MT8 703 aa19.6■□□□□ 0.73
PTCH1-201ENST00000331920 LRRFIP2Q9Y608 721 aaKnown RBP19.6■□□□□ 0.73
PTCH1-201ENST00000331920 ZNHIT6Q9NWK9 470 aaKnown RBP19.6■□□□□ 0.73
PTCH1-201ENST00000331920 DDX58O95786 925 aaKnown RBP19.59■□□□□ 0.73
PTCH1-201ENST00000331920 TICAM2Q86XR7 235 aa19.59■□□□□ 0.73
PTCH1-201ENST00000331920 RBM25P49756 843 aaKnown RBP19.59■□□□□ 0.73
PTCH1-201ENST00000331920 FKBP5Q13451 457 aaPredicted RBP19.59■□□□□ 0.73
PTCH1-201ENST00000331920 INTS3Q68E01 1043 aaKnown RBP19.59■□□□□ 0.73
PTCH1-201ENST00000331920 COG3Q96JB2 828 aa19.58■□□□□ 0.73
PTCH1-201ENST00000331920 KINO60870 393 aaKnown RBP19.58■□□□□ 0.73
PTCH1-201ENST00000331920 SERPINC1P01008 464 aa19.58■□□□□ 0.72
PTCH1-201ENST00000331920 RIC3Q7Z5B4 369 aa19.57■□□□□ 0.72
PTCH1-201ENST00000331920 CAVIN1Q6NZI2 390 aaKnown RBP19.56■□□□□ 0.72
PTCH1-201ENST00000331920 MPNDQ8N594 471 aa19.56■□□□□ 0.72
PTCH1-201ENST00000331920 NUCB2P80303 420 aa19.55■□□□□ 0.72
PTCH1-201ENST00000331920 ZNF428Q96B54 188 aa19.55■□□□□ 0.72
PTCH1-201ENST00000331920 EXOC6Q8TAG9 804 aa19.55■□□□□ 0.72
PTCH1-201ENST00000331920 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.55■□□□□ 0.72
PTCH1-201ENST00000331920 CCDC113Q9H0I3 377 aa19.54■□□□□ 0.72
PTCH1-201ENST00000331920 ERC2O15083 957 aa19.54■□□□□ 0.72
PTCH1-201ENST00000331920 SART3Q15020 963 aaKnown RBP19.54■□□□□ 0.72
PTCH1-201ENST00000331920 LRRCC1Q9C099 1032 aa19.53■□□□□ 0.72
PTCH1-201ENST00000331920 CFAP45Q9UL16 551 aa19.53■□□□□ 0.72
PTCH1-201ENST00000331920 CHMP4BP1P59074 171 aa19.53■□□□□ 0.72
PTCH1-201ENST00000331920 CCP110O43303 1012 aa19.53■□□□□ 0.72
PTCH1-201ENST00000331920 ANAPC15P60006 121 aa19.53■□□□□ 0.72
PTCH1-201ENST00000331920 MAP2K1Q02750 393 aaPredicted RBP19.53■□□□□ 0.72
PTCH1-201ENST00000331920 PPFIBP1Q86W92 1011 aa19.52■□□□□ 0.72
PTCH1-201ENST00000331920 TTC16Q8NEE8 873 aa19.52■□□□□ 0.72
PTCH1-201ENST00000331920 LNPKQ9C0E8 428 aa19.52■□□□□ 0.72
PTCH1-201ENST00000331920 PKNOX2Q96KN3 472 aa19.52■□□□□ 0.72
PTCH1-201ENST00000331920 RABEP1Q15276 862 aa19.52■□□□□ 0.71
PTCH1-201ENST00000331920 CCDC91Q7Z6B0 441 aa19.52■□□□□ 0.71
PTCH1-201ENST00000331920 DDX23Q9BUQ8 820 aaKnown RBP19.51■□□□□ 0.71
PTCH1-201ENST00000331920 MPHOSPH10O00566 681 aaKnown RBP19.51■□□□□ 0.71
PTCH1-201ENST00000331920 NINLQ9Y2I6 1382 aa19.51■□□□□ 0.71
PTCH1-201ENST00000331920 NUP155O75694 1391 aa19.5■□□□□ 0.71
PTCH1-201ENST00000331920 TSPY26PQ9H489 355 aa19.5■□□□□ 0.71
PTCH1-201ENST00000331920 PSME1Q06323 249 aa19.5■□□□□ 0.71
PTCH1-201ENST00000331920 MTERF4Q7Z6M4 381 aaKnown RBP19.5■□□□□ 0.71
PTCH1-201ENST00000331920 CCDC102AQ96A19 550 aa19.5■□□□□ 0.71
PTCH1-201ENST00000331920 SERPINA10Q9UK55 444 aa19.5■□□□□ 0.71
PTCH1-201ENST00000331920 KAT6BQ8WYB5 2073 aa19.5■□□□□ 0.71
PTCH1-201ENST00000331920 SPDYE4A6NLX3 237 aa19.5■□□□□ 0.71
PTCH1-201ENST00000331920 LUC7LQ9NQ29 371 aaKnown RBP19.5■□□□□ 0.71
PTCH1-201ENST00000331920 DESP17661 470 aa19.49■□□□□ 0.71
PTCH1-201ENST00000331920 STAMBPO95630 424 aa19.48■□□□□ 0.71
PTCH1-201ENST00000331920 SLC3A2P08195 630 aaKnown RBP19.48■□□□□ 0.71
PTCH1-201ENST00000331920 PSMA5P28066 241 aa19.48■□□□□ 0.71
PTCH1-201ENST00000331920 RBM5P52756 815 aaKnown RBP eCLIP19.48■□□□□ 0.71
PTCH1-201ENST00000331920 ROCK1Q13464 1354 aa19.48■□□□□ 0.71
PTCH1-201ENST00000331920 KIF3BO15066 747 aa19.48■□□□□ 0.71
PTCH1-201ENST00000331920 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
PTCH1-201ENST00000331920 NLRP13Q86W25 1043 aa19.48■□□□□ 0.71
PTCH1-201ENST00000331920 SLC26A8Q96RN1 970 aa19.48■□□□□ 0.71
PTCH1-201ENST00000331920 DDX19BQ9UMR2 479 aa19.48■□□□□ 0.71
PTCH1-201ENST00000331920 UBE4AQ14139 1066 aa19.47■□□□□ 0.71
PTCH1-201ENST00000331920 STK3Q13188 491 aa19.47■□□□□ 0.71
PTCH1-201ENST00000331920 FSD1Q9BTV5 496 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms