RNA–Protein interactions for RNA: ENST00000331536.7

CROT-201, Transcript of carnitine O-octanoyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CROT, Length 3,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-201ENST00000331536 CEP170BQ9Y4F5 1589 aaPredicted RBP20.67■□□□□ 0.9
CROT-201ENST00000331536 MYO3AQ8NEV4 1616 aa20.67■□□□□ 0.9
CROT-201ENST00000331536 MYBBP1AQ9BQG0 1328 aaKnown RBP20.67■□□□□ 0.9
CROT-201ENST00000331536 RBM33Q96EV2 1170 aaKnown RBP20.66■□□□□ 0.9
CROT-201ENST00000331536 CABP1Q9NZU7 370 aa20.65■□□□□ 0.9
CROT-201ENST00000331536 KDM5AP29375 1690 aaKnown RBP20.65■□□□□ 0.9
CROT-201ENST00000331536 ARHGEF28Q8N1W1 1705 aaKnown RBP20.65■□□□□ 0.9
CROT-201ENST00000331536 NCKAP5LQ9HCH0 1330 aa20.64■□□□□ 0.9
CROT-201ENST00000331536 HSPA2P54652 639 aa20.64■□□□□ 0.89
CROT-201ENST00000331536 AMER1Q5JTC6 1135 aaPredicted RBP20.64■□□□□ 0.89
CROT-201ENST00000331536 ROBO2Q9HCK4 1378 aa20.64■□□□□ 0.89
CROT-201ENST00000331536 SETD1BQ9UPS6 1966 aaKnown RBP20.63■□□□□ 0.89
CROT-201ENST00000331536 ARHGAP23Q9P227 1491 aa20.63■□□□□ 0.89
CROT-201ENST00000331536 NRXN3Q9Y4C0 1643 aa20.62■□□□□ 0.89
CROT-201ENST00000331536 SLIT1O75093 1534 aa20.62■□□□□ 0.89
CROT-201ENST00000331536 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
CROT-201ENST00000331536 KCNA6P17658 529 aa20.62■□□□□ 0.89
CROT-201ENST00000331536 NLRP13Q86W25 1043 aa20.62■□□□□ 0.89
CROT-201ENST00000331536 TULP4Q9NRJ4 1543 aa20.62■□□□□ 0.89
CROT-201ENST00000331536 NSD3Q9BZ95 1437 aa20.61■□□□□ 0.89
CROT-201ENST00000331536 TERF2IPQ9NYB0 399 aa20.6■□□□□ 0.89
CROT-201ENST00000331536 ATAD2Q6PL18 1390 aa20.6■□□□□ 0.89
CROT-201ENST00000331536 HDGFL2Q7Z4V5 671 aaPredicted RBP20.59■□□□□ 0.89
CROT-201ENST00000331536 C14orf37Q86TY3 774 aa20.59■□□□□ 0.89
CROT-201ENST00000331536 KDM4FA0A1W2PPD8 638 aa20.58■□□□□ 0.89
CROT-201ENST00000331536 MORC1Q86VD1 984 aa20.58■□□□□ 0.89
CROT-201ENST00000331536 PARD3Q8TEW0 1356 aa20.58■□□□□ 0.89
CROT-201ENST00000331536 PTPRUQ92729 1446 aa20.58■□□□□ 0.88
CROT-201ENST00000331536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.58■□□□□ 0.88
CROT-201ENST00000331536 NUDT16Q96DE0 195 aaKnown RBP20.58■□□□□ 0.88
CROT-201ENST00000331536 PUS7Q96PZ0 661 aaKnown RBP20.56■□□□□ 0.88
CROT-201ENST00000331536 CGNL1Q0VF96 1302 aa20.56■□□□□ 0.88
CROT-201ENST00000331536 PPP2R1AP30153 589 aa20.55■□□□□ 0.88
CROT-201ENST00000331536 GGNBP2Q9H3C7 697 aa20.55■□□□□ 0.88
CROT-201ENST00000331536 SIRT1Q96EB6 747 aa20.54■□□□□ 0.88
CROT-201ENST00000331536 SALL2Q9Y467 1007 aaPredicted RBP20.54■□□□□ 0.88
CROT-201ENST00000331536 CCDC61Q9Y6R9 512 aa20.54■□□□□ 0.88
CROT-201ENST00000331536 A0A1W2PP64 1363 aa20.54■□□□□ 0.88
CROT-201ENST00000331536 ANKRD36BQ8N2N9 1353 aa20.53■□□□□ 0.88
CROT-201ENST00000331536 FAM135BQ49AJ0 1406 aa20.53■□□□□ 0.88
CROT-201ENST00000331536 PNISRQ8TF01 805 aaKnown RBP20.53■□□□□ 0.88
CROT-201ENST00000331536 DLC1Q96QB1 1528 aa20.53■□□□□ 0.88
CROT-201ENST00000331536 BRD4O60885 1362 aaPredicted RBP20.53■□□□□ 0.88
CROT-201ENST00000331536 SETD1AO15047 1707 aaKnown RBP20.52■□□□□ 0.88
CROT-201ENST00000331536 MYOM1P52179 1685 aa20.51■□□□□ 0.87
CROT-201ENST00000331536 MED14O60244 1454 aa20.51■□□□□ 0.87
CROT-201ENST00000331536 TECPR2O15040 1411 aa20.51■□□□□ 0.87
CROT-201ENST00000331536 PMFBP1Q8TBY8 1022 aa20.5■□□□□ 0.87
CROT-201ENST00000331536 NPHP4O75161 1426 aaPredicted RBP20.5■□□□□ 0.87
CROT-201ENST00000331536 PPIP5K1Q6PFW1 1433 aa20.48■□□□□ 0.87
CROT-201ENST00000331536 PRR36Q9H6K5 1346 aa20.48■□□□□ 0.87
CROT-201ENST00000331536 WDR43Q15061 677 aaKnown RBP eCLIP20.48■□□□□ 0.87
CROT-201ENST00000331536 NINLQ9Y2I6 1382 aa20.47■□□□□ 0.87
CROT-201ENST00000331536 PROSER2Q86WR7 435 aaPredicted RBP20.45■□□□□ 0.86
CROT-201ENST00000331536 NGDNQ8NEJ9 315 aaKnown RBP20.45■□□□□ 0.86
CROT-201ENST00000331536 FYB1O15117 783 aa20.44■□□□□ 0.86
CROT-201ENST00000331536 PPM1GO15355 546 aaPredicted RBP20.44■□□□□ 0.86
CROT-201ENST00000331536 GTF3C3Q9Y5Q9 886 aa20.44■□□□□ 0.86
CROT-201ENST00000331536 CPS1P31327 1500 aa20.44■□□□□ 0.86
CROT-201ENST00000331536 NPC1L1Q9UHC9 1359 aa20.44■□□□□ 0.86
CROT-201ENST00000331536 PIK3R4Q99570 1358 aa20.42■□□□□ 0.86
CROT-201ENST00000331536 MTHFSP49914 203 aa20.42■□□□□ 0.86
CROT-201ENST00000331536 FBLN1P23142 703 aa20.42■□□□□ 0.86
CROT-201ENST00000331536 ACEP12821 1306 aa20.41■□□□□ 0.86
CROT-201ENST00000331536 SOX12O15370 315 aa20.41■□□□□ 0.86
CROT-201ENST00000331536 NME9Q86XW9 330 aa20.41■□□□□ 0.86
CROT-201ENST00000331536 ZNF142P52746 1687 aaPredicted RBP20.41■□□□□ 0.86
CROT-201ENST00000331536 ADAMTS8Q9UP79 889 aa20.4■□□□□ 0.86
CROT-201ENST00000331536 ZRANB1Q9UGI0 708 aa20.4■□□□□ 0.86
CROT-201ENST00000331536 PTCH1Q13635 1447 aa20.39■□□□□ 0.85
CROT-201ENST00000331536 DIP2AQ14689 1571 aa20.38■□□□□ 0.85
CROT-201ENST00000331536 PLEKHG5O94827 1062 aa20.38■□□□□ 0.85
CROT-201ENST00000331536 ZNF692Q9BU19 519 aaPredicted RBP20.37■□□□□ 0.85
CROT-201ENST00000331536 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.37■□□□□ 0.85
CROT-201ENST00000331536 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
CROT-201ENST00000331536 CCDC146Q8IYE0 955 aa20.36■□□□□ 0.85
CROT-201ENST00000331536 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
CROT-201ENST00000331536 PAK3O75914 559 aaPredicted RBP20.36■□□□□ 0.85
CROT-201ENST00000331536 KNDC1Q76NI1 1749 aa20.36■□□□□ 0.85
CROT-201ENST00000331536 ESCO1Q5FWF5 840 aa20.35■□□□□ 0.85
CROT-201ENST00000331536 ATP7BP35670 1465 aa20.35■□□□□ 0.85
CROT-201ENST00000331536 COG3Q96JB2 828 aa20.34■□□□□ 0.85
CROT-201ENST00000331536 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
CROT-201ENST00000331536 NSD2O96028 1365 aa20.33■□□□□ 0.84
CROT-201ENST00000331536 NUTM2GQ5VZR2 741 aa20.32■□□□□ 0.84
CROT-201ENST00000331536 ZBED9Q6R2W3 1325 aa20.32■□□□□ 0.84
CROT-201ENST00000331536 PLEKHG3A1L390 1219 aa20.32■□□□□ 0.84
CROT-201ENST00000331536 U2SURPO15042 1029 aaKnown RBP20.32■□□□□ 0.84
CROT-201ENST00000331536 TTC21BQ7Z4L5 1316 aa20.3■□□□□ 0.84
CROT-201ENST00000331536 CPSF1Q10570 1443 aaKnown RBP20.29■□□□□ 0.84
CROT-201ENST00000331536 PHF8Q9UPP1 1060 aa20.29■□□□□ 0.84
CROT-201ENST00000331536 EDC4Q6P2E9 1401 aaKnown RBP20.29■□□□□ 0.84
CROT-201ENST00000331536 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
CROT-201ENST00000331536 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
CROT-201ENST00000331536 XPCQ01831 940 aaPredicted RBP20.29■□□□□ 0.84
CROT-201ENST00000331536 LMOD2Q6P5Q4 547 aa20.29■□□□□ 0.84
CROT-201ENST00000331536 RRS1Q15050 365 aaKnown RBP20.28■□□□□ 0.84
CROT-201ENST00000331536 NEUROD2Q15784 382 aa20.28■□□□□ 0.84
CROT-201ENST00000331536 XRN1Q8IZH2 1706 aaKnown RBP20.28■□□□□ 0.84
CROT-201ENST00000331536 ATF3P18847 181 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms