RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 PLEKHH2Q8IVE3 1493 aa9.58□□□□□ -0.88
CLRN1-202ENST00000327047 FAM135BQ49AJ0 1406 aa9.58□□□□□ -0.88
CLRN1-202ENST00000327047 CEBPAP49715 358 aaPredicted RBP9.58□□□□□ -0.88
CLRN1-202ENST00000327047 MYO5CQ9NQX4 1742 aa9.57□□□□□ -0.88
CLRN1-202ENST00000327047 SETBP1Q9Y6X0 1596 aa9.57□□□□□ -0.88
CLRN1-202ENST00000327047 NCKAP5LQ9HCH0 1330 aa9.57□□□□□ -0.88
CLRN1-202ENST00000327047 FAM135AQ9P2D6 1515 aa9.57□□□□□ -0.88
CLRN1-202ENST00000327047 MYBBP1AQ9BQG0 1328 aaKnown RBP9.57□□□□□ -0.88
CLRN1-202ENST00000327047 EFCAB2Q5VUJ9 269 aa9.57□□□□□ -0.88
CLRN1-202ENST00000327047 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
CLRN1-202ENST00000327047 RRAGDQ9NQL2 400 aaPredicted RBP9.56□□□□□ -0.88
CLRN1-202ENST00000327047 DIP2CQ9Y2E4 1556 aa9.56□□□□□ -0.88
CLRN1-202ENST00000327047 PLXNC1O60486 1568 aa9.56□□□□□ -0.88
CLRN1-202ENST00000327047 GLIPR1L2Q4G1C9 344 aa9.56□□□□□ -0.88
CLRN1-202ENST00000327047 C20orf194Q5TEA3 1177 aa9.56□□□□□ -0.88
CLRN1-202ENST00000327047 BRD4O60885 1362 aaPredicted RBP9.55□□□□□ -0.88
CLRN1-202ENST00000327047 UNC13BO14795 1591 aa9.55□□□□□ -0.88
CLRN1-202ENST00000327047 MLECQ14165 292 aa9.55□□□□□ -0.88
CLRN1-202ENST00000327047 C8orf34Q49A92 452 aa9.55□□□□□ -0.88
CLRN1-202ENST00000327047 ZNF772Q68DY9 489 aaPredicted RBP9.55□□□□□ -0.88
CLRN1-202ENST00000327047 POGKQ9P215 609 aa9.55□□□□□ -0.88
CLRN1-202ENST00000327047 ABCC1P33527 1531 aa9.55□□□□□ -0.88
CLRN1-202ENST00000327047 FAM161AQ3B820 660 aa9.55□□□□□ -0.88
CLRN1-202ENST00000327047 A2ML1A8K2U0 1454 aa9.54□□□□□ -0.88
CLRN1-202ENST00000327047 MED14O60244 1454 aa9.54□□□□□ -0.88
CLRN1-202ENST00000327047 RGS3P49796 1198 aa9.54□□□□□ -0.88
CLRN1-202ENST00000327047 PDE3BQ13370 1112 aa9.54□□□□□ -0.88
CLRN1-202ENST00000327047 RNF216Q9NWF9 866 aaPredicted RBP9.53□□□□□ -0.88
CLRN1-202ENST00000327047 RALBP1Q15311 655 aa9.53□□□□□ -0.88
CLRN1-202ENST00000327047 AFAP1Q8N556 730 aa9.53□□□□□ -0.88
CLRN1-202ENST00000327047 DUOX2Q9NRD8 1548 aa9.53□□□□□ -0.88
CLRN1-202ENST00000327047 RALGAPBQ86X10 1494 aa9.53□□□□□ -0.88
CLRN1-202ENST00000327047 ZMYND15Q9H091 742 aa9.52□□□□□ -0.88
CLRN1-202ENST00000327047 KTN1Q86UP2 1357 aaKnown RBP9.52□□□□□ -0.88
CLRN1-202ENST00000327047 NAP1L5Q96NT1 182 aaPredicted RBP9.52□□□□□ -0.89
CLRN1-202ENST00000327047 ROCK2O75116 1388 aaKnown RBP9.52□□□□□ -0.89
CLRN1-202ENST00000327047 KDM2BQ8NHM5 1336 aa9.52□□□□□ -0.89
CLRN1-202ENST00000327047 ERBINQ96RT1 1412 aa9.52□□□□□ -0.89
CLRN1-202ENST00000327047 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
CLRN1-202ENST00000327047 IQGAP3Q86VI3 1631 aa9.51□□□□□ -0.89
CLRN1-202ENST00000327047 STRCP1A6NGW2 1772 aa9.51□□□□□ -0.89
CLRN1-202ENST00000327047 CENPQQ7L2Z9 268 aaPredicted RBP9.51□□□□□ -0.89
CLRN1-202ENST00000327047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.51□□□□□ -0.89
CLRN1-202ENST00000327047 CARD11Q9BXL7 1154 aa9.51□□□□□ -0.89
CLRN1-202ENST00000327047 RTEL1-TNFRSF6BF6WH68 1400 aa9.51□□□□□ -0.89
CLRN1-202ENST00000327047 SHPRHQ149N8 1683 aa9.5□□□□□ -0.89
CLRN1-202ENST00000327047 CHGAP10645 457 aaKnown RBP9.5□□□□□ -0.89
CLRN1-202ENST00000327047 IQGAP1P46940 1657 aa9.5□□□□□ -0.89
CLRN1-202ENST00000327047 XIRP1Q702N8 1843 aaKnown RBP9.5□□□□□ -0.89
CLRN1-202ENST00000327047 ST20-MTHFSA0A0A6YYL1 179 aa9.5□□□□□ -0.89
CLRN1-202ENST00000327047 NLRP13Q86W25 1043 aa9.5□□□□□ -0.89
CLRN1-202ENST00000327047 SLKQ9H2G2 1235 aaPredicted RBP9.5□□□□□ -0.89
CLRN1-202ENST00000327047 C1orf115Q9H7X2 142 aa9.49□□□□□ -0.89
CLRN1-202ENST00000327047 ZNF518AQ6AHZ1 1483 aa9.49□□□□□ -0.89
CLRN1-202ENST00000327047 SPDYE4A6NLX3 237 aa9.49□□□□□ -0.89
CLRN1-202ENST00000327047 HSP90AA2PQ14568 343 aaPredicted RBP9.49□□□□□ -0.89
CLRN1-202ENST00000327047 ABCA6Q8N139 1617 aa9.49□□□□□ -0.89
CLRN1-202ENST00000327047 SPAG9O60271 1321 aaKnown RBP9.48□□□□□ -0.89
CLRN1-202ENST00000327047 PRAG1Q86YV5 1406 aa9.48□□□□□ -0.89
CLRN1-202ENST00000327047 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
CLRN1-202ENST00000327047 CCDC144AA2RUR9 1427 aa9.48□□□□□ -0.89
CLRN1-202ENST00000327047 A2MP01023 1474 aa9.48□□□□□ -0.89
CLRN1-202ENST00000327047 PHLPP1O60346 1717 aa9.48□□□□□ -0.89
CLRN1-202ENST00000327047 JCADQ9P266 1359 aa9.47□□□□□ -0.89
CLRN1-202ENST00000327047 L1TD1Q5T7N2 865 aaKnown RBP9.47□□□□□ -0.89
CLRN1-202ENST00000327047 NWD1Q149M9 1564 aa9.47□□□□□ -0.89
CLRN1-202ENST00000327047 ROBO1Q9Y6N7 1651 aa9.47□□□□□ -0.89
CLRN1-202ENST00000327047 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
CLRN1-202ENST00000327047 NBPF1Q3BBV0 1214 aa9.46□□□□□ -0.89
CLRN1-202ENST00000327047 CC2D1BQ5T0F9 858 aaKnown RBP9.46□□□□□ -0.89
CLRN1-202ENST00000327047 PNNQ9H307 717 aaKnown RBP9.46□□□□□ -0.89
CLRN1-202ENST00000327047 MLH3Q9UHC1 1453 aa9.46□□□□□ -0.89
CLRN1-202ENST00000327047 HSP90AA1P07900 732 aaKnown RBP9.46□□□□□ -0.9
CLRN1-202ENST00000327047 RGL3Q3MIN7 710 aa9.46□□□□□ -0.9
CLRN1-202ENST00000327047 GPRASP1Q5JY77 1395 aa9.46□□□□□ -0.9
CLRN1-202ENST00000327047 CCDC125Q86Z20 511 aa9.45□□□□□ -0.9
CLRN1-202ENST00000327047 NECTIN2Q92692 538 aa9.45□□□□□ -0.9
CLRN1-202ENST00000327047 SCAPERQ9BY12 1400 aa9.45□□□□□ -0.9
CLRN1-202ENST00000327047 SLC34A2O95436 690 aa9.45□□□□□ -0.9
CLRN1-202ENST00000327047 SPATA31A6Q5VVP1 1343 aa9.45□□□□□ -0.9
CLRN1-202ENST00000327047 INO80Q9ULG1 1556 aaPredicted RBP9.44□□□□□ -0.9
CLRN1-202ENST00000327047 RXRBP28702 533 aa9.44□□□□□ -0.9
CLRN1-202ENST00000327047 GZF1Q9H116 711 aaPredicted RBP9.44□□□□□ -0.9
CLRN1-202ENST00000327047 TRPM1Q7Z4N2 1603 aa9.44□□□□□ -0.9
CLRN1-202ENST00000327047 PARD3Q8TEW0 1356 aa9.44□□□□□ -0.9
CLRN1-202ENST00000327047 XRCC6P12956 609 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLRN1-202ENST00000327047 PANK2Q9BZ23 570 aa9.44□□□□□ -0.9
CLRN1-202ENST00000327047 CLTCQ00610 1675 aaKnown RBP9.44□□□□□ -0.9
CLRN1-202ENST00000327047 IGSF3O75054 1194 aa9.43□□□□□ -0.9
CLRN1-202ENST00000327047 SEC24BO95487 1268 aa9.43□□□□□ -0.9
CLRN1-202ENST00000327047 ATP7AQ04656 1500 aa9.43□□□□□ -0.9
CLRN1-202ENST00000327047 USP19O94966 1318 aa9.43□□□□□ -0.9
CLRN1-202ENST00000327047 GOLGA6L3A6NEY3 463 aa9.43□□□□□ -0.9
CLRN1-202ENST00000327047 RRP9O43818 475 aaKnown RBP9.43□□□□□ -0.9
CLRN1-202ENST00000327047 E9PCH4 1651 aa9.42□□□□□ -0.9
CLRN1-202ENST00000327047 ZC3H13Q5T200 1668 aaKnown RBP9.42□□□□□ -0.9
CLRN1-202ENST00000327047 CLCN1P35523 988 aa9.42□□□□□ -0.9
CLRN1-202ENST00000327047 BECN1Q14457 450 aa9.42□□□□□ -0.9
CLRN1-202ENST00000327047 NPHP4O75161 1426 aaPredicted RBP9.42□□□□□ -0.9
CLRN1-202ENST00000327047 COL16A1Q07092 1604 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms