RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 STAC3Q96MF2 364 aa23.29■■□□□ 1.32
TRAPPC12-201ENST00000324266 KIDINS220Q9ULH0 1771 aa23.29■■□□□ 1.32
TRAPPC12-201ENST00000324266 ADGRF5Q8IZF2 1346 aa23.28■■□□□ 1.32
TRAPPC12-201ENST00000324266 KDM5AP29375 1690 aaKnown RBP23.28■■□□□ 1.32
TRAPPC12-201ENST00000324266 E9PSI1 815 aa23.27■■□□□ 1.32
TRAPPC12-201ENST00000324266 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
TRAPPC12-201ENST00000324266 ERVK-7P63135 1459 aa23.26■■□□□ 1.31
TRAPPC12-201ENST00000324266 IGHDP01880 384 aa23.26■■□□□ 1.31
TRAPPC12-201ENST00000324266 MLH3Q9UHC1 1453 aa23.24■■□□□ 1.31
TRAPPC12-201ENST00000324266 KANK1Q14678 1352 aa23.24■■□□□ 1.31
TRAPPC12-201ENST00000324266 TRHP20396 242 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC12-201ENST00000324266 TET3O43151 1660 aa23.23■■□□□ 1.31
TRAPPC12-201ENST00000324266 RICTORQ6R327 1708 aa23.23■■□□□ 1.31
TRAPPC12-201ENST00000324266 HECW2Q9P2P5 1572 aa23.23■■□□□ 1.31
TRAPPC12-201ENST00000324266 PNNQ9H307 717 aaKnown RBP23.22■■□□□ 1.31
TRAPPC12-201ENST00000324266 DEPDC5O75140 1603 aa23.22■■□□□ 1.31
TRAPPC12-201ENST00000324266 TNNT2P45379 298 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC12-201ENST00000324266 NEUROD2Q15784 382 aa23.21■■□□□ 1.31
TRAPPC12-201ENST00000324266 PANK1Q8TE04 598 aa23.2■■□□□ 1.3
TRAPPC12-201ENST00000324266 COG6Q9Y2V7 657 aa23.2■■□□□ 1.3
TRAPPC12-201ENST00000324266 ABCA6Q8N139 1617 aa23.2■■□□□ 1.3
TRAPPC12-201ENST00000324266 FRMPD1Q5SYB0 1578 aa23.19■■□□□ 1.3
TRAPPC12-201ENST00000324266 WWC1Q8IX03 1113 aa23.19■■□□□ 1.3
TRAPPC12-201ENST00000324266 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
TRAPPC12-201ENST00000324266 RRP7AQ9Y3A4 280 aaKnown RBP23.18■■□□□ 1.3
TRAPPC12-201ENST00000324266 CENPJQ9HC77 1338 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC12-201ENST00000324266 KIAA1210Q9ULL0 1709 aa23.18■■□□□ 1.3
TRAPPC12-201ENST00000324266 YEATS2Q9ULM3 1422 aa23.17■■□□□ 1.3
TRAPPC12-201ENST00000324266 FRAT2O75474 233 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC12-201ENST00000324266 VWDEQ8N2E2 1590 aa23.16■■□□□ 1.3
TRAPPC12-201ENST00000324266 CGNL1Q0VF96 1302 aa23.14■■□□□ 1.3
TRAPPC12-201ENST00000324266 CHGAP10645 457 aaKnown RBP23.14■■□□□ 1.3
TRAPPC12-201ENST00000324266 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.3
TRAPPC12-201ENST00000324266 PDE3AQ14432 1141 aa23.14■■□□□ 1.29
TRAPPC12-201ENST00000324266 PRDM4Q9UKN5 801 aa23.14■■□□□ 1.29
TRAPPC12-201ENST00000324266 CLCN1P35523 988 aa23.13■■□□□ 1.29
TRAPPC12-201ENST00000324266 CALD1Q05682 793 aaKnown RBP23.13■■□□□ 1.29
TRAPPC12-201ENST00000324266 MYOM2P54296 1465 aa23.13■■□□□ 1.29
TRAPPC12-201ENST00000324266 SEC24BO95487 1268 aa23.13■■□□□ 1.29
TRAPPC12-201ENST00000324266 MORC1Q86VD1 984 aa23.13■■□□□ 1.29
TRAPPC12-201ENST00000324266 TRAK1Q9UPV9 953 aa23.13■■□□□ 1.29
TRAPPC12-201ENST00000324266 SLC12A5Q9H2X9 1139 aa23.12■■□□□ 1.29
TRAPPC12-201ENST00000324266 POLR3AO14802 1390 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC12-201ENST00000324266 USP19O94966 1318 aa23.11■■□□□ 1.29
TRAPPC12-201ENST00000324266 NSD3Q9BZ95 1437 aa23.11■■□□□ 1.29
TRAPPC12-201ENST00000324266 DIP2CQ9Y2E4 1556 aa23.11■■□□□ 1.29
TRAPPC12-201ENST00000324266 TNNQ9UQP3 1299 aa23.11■■□□□ 1.29
TRAPPC12-201ENST00000324266 NGEFQ8N5V2 710 aa23.1■■□□□ 1.29
TRAPPC12-201ENST00000324266 MROH1Q8NDA8 1641 aa23.1■■□□□ 1.29
TRAPPC12-201ENST00000324266 KIF1BO60333 1816 aa23.09■■□□□ 1.29
TRAPPC12-201ENST00000324266 BCL2L13Q9BXK5 485 aa23.09■■□□□ 1.29
TRAPPC12-201ENST00000324266 MROH2AA6NES4 1674 aa23.09■■□□□ 1.29
TRAPPC12-201ENST00000324266 GGT6Q6P531 493 aa23.09■■□□□ 1.29
TRAPPC12-201ENST00000324266 NOS1P29475 1434 aa23.08■■□□□ 1.29
TRAPPC12-201ENST00000324266 TCP11L2Q8N4U5 519 aa23.08■■□□□ 1.29
TRAPPC12-201ENST00000324266 L1TD1Q5T7N2 865 aaKnown RBP23.07■■□□□ 1.28
TRAPPC12-201ENST00000324266 RARSP54136 660 aaKnown RBP23.07■■□□□ 1.28
TRAPPC12-201ENST00000324266 RLBP1P12271 317 aa23.06■■□□□ 1.28
TRAPPC12-201ENST00000324266 TMEM132EQ6IEE7 984 aa23.06■■□□□ 1.28
TRAPPC12-201ENST00000324266 RUNDC1Q96C34 613 aa23.06■■□□□ 1.28
TRAPPC12-201ENST00000324266 NEURL4Q96JN8 1562 aa23.06■■□□□ 1.28
TRAPPC12-201ENST00000324266 PDIA4P13667 645 aaKnown RBP23.06■■□□□ 1.28
TRAPPC12-201ENST00000324266 IFT172Q9UG01 1749 aa23.04■■□□□ 1.28
TRAPPC12-201ENST00000324266 SHPRHQ149N8 1683 aa23.04■■□□□ 1.28
TRAPPC12-201ENST00000324266 SBNO2Q9Y2G9 1366 aa23.04■■□□□ 1.28
TRAPPC12-201ENST00000324266 PCDHB15Q9Y5E8 787 aa23.04■■□□□ 1.28
TRAPPC12-201ENST00000324266 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
TRAPPC12-201ENST00000324266 CFAP65Q6ZU64 1925 aaKnown RBP23.03■■□□□ 1.28
TRAPPC12-201ENST00000324266 NINLQ9Y2I6 1382 aa23.03■■□□□ 1.28
TRAPPC12-201ENST00000324266 MAPK8IP3Q9UPT6 1336 aa23.03■■□□□ 1.28
TRAPPC12-201ENST00000324266 MTHFSP49914 203 aa23.03■■□□□ 1.28
TRAPPC12-201ENST00000324266 PDCL3Q9H2J4 239 aa23.03■■□□□ 1.28
TRAPPC12-201ENST00000324266 NRXN1Q9ULB1 1477 aa23.02■■□□□ 1.28
TRAPPC12-201ENST00000324266 VIRMAQ69YN4 1812 aaKnown RBP23.02■■□□□ 1.28
TRAPPC12-201ENST00000324266 MYO3AQ8NEV4 1616 aa23.01■■□□□ 1.27
TRAPPC12-201ENST00000324266 BCL11BQ9C0K0 894 aaPredicted RBP23.01■■□□□ 1.27
TRAPPC12-201ENST00000324266 POGKQ9P215 609 aa22.99■■□□□ 1.27
TRAPPC12-201ENST00000324266 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
TRAPPC12-201ENST00000324266 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC12-201ENST00000324266 C14orf93Q9H972 538 aaKnown RBP22.98■■□□□ 1.27
TRAPPC12-201ENST00000324266 NUTM2DQ5VT03 806 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC12-201ENST00000324266 SLKQ9H2G2 1235 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC12-201ENST00000324266 PMFBP1Q8TBY8 1022 aa22.97■■□□□ 1.27
TRAPPC12-201ENST00000324266 PDZRN3Q9UPQ7 1066 aa22.97■■□□□ 1.27
TRAPPC12-201ENST00000324266 WDR63Q8IWG1 891 aa22.96■■□□□ 1.27
TRAPPC12-201ENST00000324266 ADGRB3O60242 1522 aa22.95■■□□□ 1.27
TRAPPC12-201ENST00000324266 QRICH2Q9H0J4 1663 aa22.95■■□□□ 1.26
TRAPPC12-201ENST00000324266 NLRP1Q9C000 1473 aa22.95■■□□□ 1.26
TRAPPC12-201ENST00000324266 SETBP1Q9Y6X0 1596 aa22.93■■□□□ 1.26
TRAPPC12-201ENST00000324266 U2AF1L5P0DN76 240 aaPredicted RBP22.93■■□□□ 1.26
TRAPPC12-201ENST00000324266 U2AF1Q01081 240 aaKnown RBP eCLIP22.93■■□□□ 1.262e-6■□□□□ 9.2
TRAPPC12-201ENST00000324266 CFAP53Q96M91 514 aa22.93■■□□□ 1.26
TRAPPC12-201ENST00000324266 BECN1Q14457 450 aa22.92■■□□□ 1.26
TRAPPC12-201ENST00000324266 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
TRAPPC12-201ENST00000324266 NPATQ14207 1427 aa22.92■■□□□ 1.26
TRAPPC12-201ENST00000324266 ADGRB1O14514 1584 aa22.91■■□□□ 1.26
TRAPPC12-201ENST00000324266 ZC3H13Q5T200 1668 aaKnown RBP22.91■■□□□ 1.26
TRAPPC12-201ENST00000324266 TPM2P07951 284 aa22.9■■□□□ 1.26
TRAPPC12-201ENST00000324266 ARHGEF40Q8TER5 1519 aa22.9■■□□□ 1.26
TRAPPC12-201ENST00000324266 SIGLEC1Q9BZZ2 1709 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms