RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.28
SNRNP200-201ENST00000323853 SMC3Q9UQE7 1217 aa13.27□□□□□ -0.28
SNRNP200-201ENST00000323853 TOPBP1Q92547 1522 aa13.27□□□□□ -0.28
SNRNP200-201ENST00000323853 MTHFSP49914 203 aa13.27□□□□□ -0.28
SNRNP200-201ENST00000323853 PES1O00541 588 aaKnown RBP13.27□□□□□ -0.29
SNRNP200-201ENST00000323853 A0A0U1RQG5 324 aaPredicted RBP13.27□□□□□ -0.29
SNRNP200-201ENST00000323853 TCP11L2Q8N4U5 519 aa13.26□□□□□ -0.29
SNRNP200-201ENST00000323853 PCF11O94913 1555 aaKnown RBP13.26□□□□□ -0.29
SNRNP200-201ENST00000323853 VPS53Q5VIR6 699 aa13.26□□□□□ -0.29
SNRNP200-201ENST00000323853 DNMBPQ6XZF7 1577 aa13.26□□□□□ -0.29
SNRNP200-201ENST00000323853 TPM1P09493 284 aa13.26□□□□□ -0.29
SNRNP200-201ENST00000323853 TSR1Q2NL82 804 aaKnown RBP13.26□□□□□ -0.29
SNRNP200-201ENST00000323853 NBPF8Q3BBV2 869 aa13.25□□□□□ -0.29
SNRNP200-201ENST00000323853 BICD2Q8TD16 824 aa13.25□□□□□ -0.29
SNRNP200-201ENST00000323853 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
SNRNP200-201ENST00000323853 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
SNRNP200-201ENST00000323853 CPLX2Q6PUV4 134 aaKnown RBP13.25□□□□□ -0.29
SNRNP200-201ENST00000323853 TNNT3P45378 269 aaPredicted RBP13.25□□□□□ -0.29
SNRNP200-201ENST00000323853 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
SNRNP200-201ENST00000323853 NBPF1Q3BBV0 1214 aa13.24□□□□□ -0.29
SNRNP200-201ENST00000323853 VPS37CA5D8V6 355 aaPredicted RBP13.24□□□□□ -0.29
SNRNP200-201ENST00000323853 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
SNRNP200-201ENST00000323853 NESP48681 1621 aa13.24□□□□□ -0.29
SNRNP200-201ENST00000323853 UBTFL1P0CB47 393 aaPredicted RBP13.24□□□□□ -0.29
SNRNP200-201ENST00000323853 AMOTL1Q8IY63 956 aa13.24□□□□□ -0.29
SNRNP200-201ENST00000323853 CPLX1O14810 134 aa13.23□□□□□ -0.29
SNRNP200-201ENST00000323853 ZNF592Q92610 1267 aa13.23□□□□□ -0.29
SNRNP200-201ENST00000323853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.23□□□□□ -0.293e-7■■■□□ 14.6
SNRNP200-201ENST00000323853 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
SNRNP200-201ENST00000323853 APPP05067 770 aa13.23□□□□□ -0.29
SNRNP200-201ENST00000323853 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.23□□□□□ -0.29
SNRNP200-201ENST00000323853 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
SNRNP200-201ENST00000323853 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
SNRNP200-201ENST00000323853 CC2D2AQ9P2K1 1620 aa13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 NOL10Q9BSC4 688 aaKnown RBP13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 HOOK1Q9UJC3 728 aaKnown RBP13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 FAM69CQ0P6D2 419 aa13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 SASS6Q6UVJ0 657 aa13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 CNTROBQ8N137 903 aa13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 NOB1Q9ULX3 412 aaKnown RBP13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 RIC3Q7Z5B4 369 aa13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 TRDNQ13061 729 aa13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 NFXL1Q6ZNB6 911 aa13.22□□□□□ -0.29
SNRNP200-201ENST00000323853 PTPN23Q9H3S7 1636 aa13.21□□□□□ -0.29
SNRNP200-201ENST00000323853 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
SNRNP200-201ENST00000323853 CCAR2Q8N163 923 aaKnown RBP13.21□□□□□ -0.29
SNRNP200-201ENST00000323853 GCC1Q96CN9 775 aa13.21□□□□□ -0.29
SNRNP200-201ENST00000323853 MRE11P49959 708 aa13.2□□□□□ -0.3
SNRNP200-201ENST00000323853 AFAP1Q8N556 730 aa13.2□□□□□ -0.3
SNRNP200-201ENST00000323853 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
SNRNP200-201ENST00000323853 CDK13Q14004 1512 aaKnown RBP13.2□□□□□ -0.3
SNRNP200-201ENST00000323853 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
SNRNP200-201ENST00000323853 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
SNRNP200-201ENST00000323853 CUL7Q14999 1698 aa13.2□□□□□ -0.3
SNRNP200-201ENST00000323853 FOSBP53539 338 aa13.2□□□□□ -0.3
SNRNP200-201ENST00000323853 BCAR3O75815 825 aa13.2□□□□□ -0.3
SNRNP200-201ENST00000323853 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
SNRNP200-201ENST00000323853 ERICH2A1L162 156 aa13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 PSMA5P28066 241 aa13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 GAS2L2Q8NHY3 880 aa13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 PNISRQ8TF01 805 aaKnown RBP13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 CEP89Q96ST8 783 aa13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 CCDC70Q6NSX1 233 aa13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 PDE4CQ08493 712 aa13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 AIMP1Q12904 312 aaKnown RBP13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 CCDC47Q96A33 483 aaKnown RBP13.19□□□□□ -0.3
SNRNP200-201ENST00000323853 NUTM2GQ5VZR2 741 aa13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 RAPGEF4Q8WZA2 1011 aa13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 PRAM1Q96QH2 718 aa13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 GNAI3P08754 354 aa13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 GPS2Q13227 327 aa13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 FAM43AQ8N2R8 423 aa13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 EPRSP07814 1512 aaKnown RBP13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 LETM1O95202 739 aaPredicted RBP13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 ANKRD20A12PQ8NF67 263 aa13.18□□□□□ -0.3
SNRNP200-201ENST00000323853 PCMTD1Q96MG8 357 aaPredicted RBP13.17□□□□□ -0.3
SNRNP200-201ENST00000323853 VPS37DQ86XT2 251 aa13.17□□□□□ -0.3
SNRNP200-201ENST00000323853 TRAK2O60296 914 aa13.17□□□□□ -0.3
SNRNP200-201ENST00000323853 NASPP49321 788 aaPredicted RBP13.17□□□□□ -0.3
SNRNP200-201ENST00000323853 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
SNRNP200-201ENST00000323853 TSR2Q969E8 191 aaKnown RBP13.17□□□□□ -0.3
SNRNP200-201ENST00000323853 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
SNRNP200-201ENST00000323853 NEUROD6Q96NK8 337 aa13.17□□□□□ -0.3
SNRNP200-201ENST00000323853 CT47B1P0C2W7 299 aaPredicted RBP13.16□□□□□ -0.3
SNRNP200-201ENST00000323853 CDK19Q9BWU1 502 aa13.16□□□□□ -0.3
SNRNP200-201ENST00000323853 RABEP1Q15276 862 aa13.16□□□□□ -0.3
SNRNP200-201ENST00000323853 IQGAP2Q13576 1575 aa13.16□□□□□ -0.3
SNRNP200-201ENST00000323853 NAIPQ13075 1403 aa13.16□□□□□ -0.3
SNRNP200-201ENST00000323853 FSD1Q9BTV5 496 aa13.16□□□□□ -0.3
SNRNP200-201ENST00000323853 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
SNRNP200-201ENST00000323853 HOMER1Q86YM7 354 aa13.15□□□□□ -0.3
SNRNP200-201ENST00000323853 CAMSAP2Q08AD1 1489 aa13.15□□□□□ -0.3
SNRNP200-201ENST00000323853 NLRP6P59044 892 aa13.15□□□□□ -0.3
SNRNP200-201ENST00000323853 SYTL4Q96C24 671 aaPredicted RBP13.15□□□□□ -0.3
SNRNP200-201ENST00000323853 BACH2Q9BYV9 841 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms