RNA–Protein interactions for RNA: ENST00000320640.10

ITFG1-201, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITFG1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-201ENST00000320640 ERBINQ96RT1 1412 aa18.95■□□□□ 0.62
ITFG1-201ENST00000320640 CSPP1Q1MSJ5 1256 aa18.95■□□□□ 0.62
ITFG1-201ENST00000320640 K7ELQ4 463 aaPredicted RBP18.94■□□□□ 0.62
ITFG1-201ENST00000320640 PLCB2Q00722 1185 aa18.94■□□□□ 0.62
ITFG1-201ENST00000320640 ANKRD50Q9ULJ7 1429 aa18.93■□□□□ 0.62
ITFG1-201ENST00000320640 ZNF710Q8N1W2 664 aa18.93■□□□□ 0.62
ITFG1-201ENST00000320640 E9PCH4 1651 aa18.92■□□□□ 0.62
ITFG1-201ENST00000320640 ZNF771Q7L3S4 317 aaPredicted RBP18.91■□□□□ 0.62
ITFG1-201ENST00000320640 CIZ1Q9ULV3 898 aaPredicted RBP18.91■□□□□ 0.62
ITFG1-201ENST00000320640 CDK11BP21127 795 aaKnown RBP18.91■□□□□ 0.62
ITFG1-201ENST00000320640 MVPQ14764 893 aaKnown RBP18.91■□□□□ 0.62
ITFG1-201ENST00000320640 UTP14CQ5TAP6 766 aaKnown RBP18.91■□□□□ 0.62
ITFG1-201ENST00000320640 TSR2Q969E8 191 aaKnown RBP18.91■□□□□ 0.62
ITFG1-201ENST00000320640 CTTNBP2Q8WZ74 1663 aa18.91■□□□□ 0.62
ITFG1-201ENST00000320640 NSFL1CQ9UNZ2 370 aaKnown RBP18.9■□□□□ 0.62
ITFG1-201ENST00000320640 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.9■□□□□ 0.62
ITFG1-201ENST00000320640 U2AF2P26368 475 aaKnown RBP eCLIP18.89■□□□□ 0.611e-7■■□□□ 12.6
ITFG1-201ENST00000320640 KIAA2012Q0VF49 1180 aa18.89■□□□□ 0.61
ITFG1-201ENST00000320640 MAGI2Q86UL8 1455 aa18.89■□□□□ 0.61
ITFG1-201ENST00000320640 DZIP1LQ8IYY4 767 aaKnown RBP18.89■□□□□ 0.61
ITFG1-201ENST00000320640 SMC4Q9NTJ3 1288 aa18.89■□□□□ 0.61
ITFG1-201ENST00000320640 CCDC39Q9UFE4 941 aa18.89■□□□□ 0.61
ITFG1-201ENST00000320640 CADPSQ9ULU8 1353 aa18.89■□□□□ 0.61
ITFG1-201ENST00000320640 AK9Q5TCS8 1911 aa18.88■□□□□ 0.61
ITFG1-201ENST00000320640 ANKRD30AQ9BXX3 1397 aa18.88■□□□□ 0.61
ITFG1-201ENST00000320640 TMEM51Q9NW97 253 aa18.88■□□□□ 0.61
ITFG1-201ENST00000320640 COL17A1Q9UMD9 1497 aaPredicted RBP18.88■□□□□ 0.61
ITFG1-201ENST00000320640 PTMSP20962 102 aa18.87■□□□□ 0.61
ITFG1-201ENST00000320640 SNX21Q969T3 373 aa18.87■□□□□ 0.61
ITFG1-201ENST00000320640 TTC12Q9H892 705 aaPredicted RBP18.87■□□□□ 0.61
ITFG1-201ENST00000320640 TCP11L2Q8N4U5 519 aa18.87■□□□□ 0.61
ITFG1-201ENST00000320640 KIF2CQ99661 725 aa18.87■□□□□ 0.61
ITFG1-201ENST00000320640 GPT2Q8TD30 523 aa18.87■□□□□ 0.61
ITFG1-201ENST00000320640 CHMP4AQ9BY43 222 aa18.87■□□□□ 0.61
ITFG1-201ENST00000320640 RBM25P49756 843 aaKnown RBP18.86■□□□□ 0.61
ITFG1-201ENST00000320640 ANKRD45Q5TZF3 282 aa18.86■□□□□ 0.61
ITFG1-201ENST00000320640 ZKSCAN2Q63HK3 967 aa18.86■□□□□ 0.61
ITFG1-201ENST00000320640 C1orf115Q9H7X2 142 aa18.86■□□□□ 0.61
ITFG1-201ENST00000320640 LMBRD1Q9NUN5 540 aa18.86■□□□□ 0.61
ITFG1-201ENST00000320640 ZNF445P59923 1031 aa18.86■□□□□ 0.61
ITFG1-201ENST00000320640 TMEM63CQ9P1W3 806 aa18.86■□□□□ 0.61
ITFG1-201ENST00000320640 PAXIP1Q6ZW49 1069 aaPredicted RBP18.85■□□□□ 0.61
ITFG1-201ENST00000320640 NESP48681 1621 aa18.85■□□□□ 0.61
ITFG1-201ENST00000320640 MYRIPQ8NFW9 859 aa18.85■□□□□ 0.61
ITFG1-201ENST00000320640 PDLIM2Q96JY6 352 aa18.85■□□□□ 0.61
ITFG1-201ENST00000320640 ZGPATQ8N5A5 531 aaKnown RBP18.84■□□□□ 0.61
ITFG1-201ENST00000320640 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
ITFG1-201ENST00000320640 PRAG1Q86YV5 1406 aa18.84■□□□□ 0.61
ITFG1-201ENST00000320640 INSRP06213 1382 aa18.84■□□□□ 0.61
ITFG1-201ENST00000320640 NCOA3Q9Y6Q9 1424 aa18.84■□□□□ 0.61
ITFG1-201ENST00000320640 TSPY4P0CV99 314 aa18.84■□□□□ 0.61
ITFG1-201ENST00000320640 TSPY10P0CW01 314 aa18.84■□□□□ 0.61
ITFG1-201ENST00000320640 HS1BP3Q53T59 392 aa18.84■□□□□ 0.61
ITFG1-201ENST00000320640 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.613e-7■■■■■ 37.4
ITFG1-201ENST00000320640 NOL8Q76FK4 1167 aaKnown RBP18.83■□□□□ 0.61
ITFG1-201ENST00000320640 PDCL2Q8N4E4 241 aa18.83■□□□□ 0.6
ITFG1-201ENST00000320640 DNMT1P26358 1616 aaKnown RBP18.83■□□□□ 0.6
ITFG1-201ENST00000320640 CCDC144AA2RUR9 1427 aa18.83■□□□□ 0.6
ITFG1-201ENST00000320640 GTPBP4Q9BZE4 634 aaKnown RBP18.82■□□□□ 0.6
ITFG1-201ENST00000320640 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
ITFG1-201ENST00000320640 BCL2L12Q9HB09 334 aa18.81■□□□□ 0.6
ITFG1-201ENST00000320640 KIF3AQ9Y496 699 aa18.81■□□□□ 0.6
ITFG1-201ENST00000320640 TRERF1Q96PN7 1200 aa18.81■□□□□ 0.6
ITFG1-201ENST00000320640 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
ITFG1-201ENST00000320640 LETM1O95202 739 aaPredicted RBP18.81■□□□□ 0.6
ITFG1-201ENST00000320640 TRIM27P14373 513 aa18.81■□□□□ 0.6
ITFG1-201ENST00000320640 TBC1D9Q6ZT07 1266 aa18.81■□□□□ 0.6
ITFG1-201ENST00000320640 KIF20AO95235 890 aa18.8■□□□□ 0.6
ITFG1-201ENST00000320640 KIF16BQ96L93 1317 aa18.8■□□□□ 0.6
ITFG1-201ENST00000320640 GDPD2Q9HCC8 539 aa18.79■□□□□ 0.6
ITFG1-201ENST00000320640 TMEM57Q8N5G2 664 aa18.79■□□□□ 0.6
ITFG1-201ENST00000320640 USP25Q9UHP3 1055 aa18.79■□□□□ 0.6
ITFG1-201ENST00000320640 NINLQ9Y2I6 1382 aa18.79■□□□□ 0.6
ITFG1-201ENST00000320640 NOLC1Q14978 699 aaKnown RBP eCLIP18.78■□□□□ 0.6
ITFG1-201ENST00000320640 FANCD2Q9BXW9 1451 aa18.78■□□□□ 0.6
ITFG1-201ENST00000320640 LRSAM1Q6UWE0 723 aa18.78■□□□□ 0.6
ITFG1-201ENST00000320640 NOB1Q9ULX3 412 aaKnown RBP18.78■□□□□ 0.6
ITFG1-201ENST00000320640 KCNJ4P48050 445 aa18.77■□□□□ 0.6
ITFG1-201ENST00000320640 APBB1O00213 710 aa18.77■□□□□ 0.6
ITFG1-201ENST00000320640 CERS3Q8IU89 383 aa18.77■□□□□ 0.6
ITFG1-201ENST00000320640 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.59
ITFG1-201ENST00000320640 CHD1LQ86WJ1 897 aa18.77■□□□□ 0.59
ITFG1-201ENST00000320640 EXOSC9Q06265 439 aaKnown RBP18.76■□□□□ 0.59
ITFG1-201ENST00000320640 ARHGEF12Q9NZN5 1544 aa18.75■□□□□ 0.59
ITFG1-201ENST00000320640 ERICH4A6NGS2 130 aa18.75■□□□□ 0.59
ITFG1-201ENST00000320640 SSH1Q8WYL5 1049 aa18.74■□□□□ 0.59
ITFG1-201ENST00000320640 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
ITFG1-201ENST00000320640 MCM5P33992 734 aa18.74■□□□□ 0.59
ITFG1-201ENST00000320640 NUCB2P80303 420 aa18.73■□□□□ 0.59
ITFG1-201ENST00000320640 IPO4Q8TEX9 1081 aaKnown RBP18.73■□□□□ 0.59
ITFG1-201ENST00000320640 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
ITFG1-201ENST00000320640 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
ITFG1-201ENST00000320640 U2AF1L5P0DN76 240 aaPredicted RBP18.72■□□□□ 0.59
ITFG1-201ENST00000320640 U2AF1Q01081 240 aaKnown RBP eCLIP18.72■□□□□ 0.59
ITFG1-201ENST00000320640 RUNDC1Q96C34 613 aa18.72■□□□□ 0.59
ITFG1-201ENST00000320640 DDX19BQ9UMR2 479 aa18.72■□□□□ 0.59
ITFG1-201ENST00000320640 IBTKQ9P2D0 1353 aaPredicted RBP18.72■□□□□ 0.59
ITFG1-201ENST00000320640 WDR7Q9Y4E6 1490 aa18.72■□□□□ 0.59
ITFG1-201ENST00000320640 AEBP1Q8IUX7 1158 aa18.72■□□□□ 0.59
ITFG1-201ENST00000320640 SPC24Q8NBT2 197 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms