RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 AMOTL1Q8IY63 956 aa22.6■■□□□ 1.21
UBXN2A-201ENST00000309033 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
UBXN2A-201ENST00000309033 NLRP6P59044 892 aa22.6■■□□□ 1.21
UBXN2A-201ENST00000309033 TRDNQ13061 729 aa22.6■■□□□ 1.21
UBXN2A-201ENST00000309033 TNNT3P45378 269 aaPredicted RBP22.59■■□□□ 1.21
UBXN2A-201ENST00000309033 DHX16O60231 1041 aaKnown RBP22.59■■□□□ 1.21
UBXN2A-201ENST00000309033 UBTFL1P0CB47 393 aaPredicted RBP22.58■■□□□ 1.21
UBXN2A-201ENST00000309033 HSP90AA2PQ14568 343 aaPredicted RBP22.58■■□□□ 1.2
UBXN2A-201ENST00000309033 ERC2O15083 957 aa22.58■■□□□ 1.2
UBXN2A-201ENST00000309033 TRIM34Q9BYJ4 488 aa22.57■■□□□ 1.2
UBXN2A-201ENST00000309033 C1orf115Q9H7X2 142 aa22.57■■□□□ 1.2
UBXN2A-201ENST00000309033 TPM2P07951 284 aa22.57■■□□□ 1.2
UBXN2A-201ENST00000309033 PRM3Q9NNZ6 103 aa22.57■■□□□ 1.2
UBXN2A-201ENST00000309033 PCMTD1Q96MG8 357 aaPredicted RBP22.56■■□□□ 1.2
UBXN2A-201ENST00000309033 CDC45O75419 566 aa22.56■■□□□ 1.2
UBXN2A-201ENST00000309033 TPM1P09493 284 aa22.56■■□□□ 1.2
UBXN2A-201ENST00000309033 STAC3Q96MF2 364 aa22.56■■□□□ 1.2
UBXN2A-201ENST00000309033 EXOSC9Q06265 439 aaKnown RBP22.56■■□□□ 1.2
UBXN2A-201ENST00000309033 HSP90AB4PQ58FF6 505 aa22.56■■□□□ 1.2
UBXN2A-201ENST00000309033 PRKAR2BP31323 418 aa22.55■■□□□ 1.2
UBXN2A-201ENST00000309033 ATF3P18847 181 aa22.55■■□□□ 1.2
UBXN2A-201ENST00000309033 WASHC4Q2M389 1173 aa22.54■■□□□ 1.2
UBXN2A-201ENST00000309033 KDM4AO75164 1064 aa22.54■■□□□ 1.2
UBXN2A-201ENST00000309033 WWC1Q8IX03 1113 aa22.54■■□□□ 1.2
UBXN2A-201ENST00000309033 RRBP1Q9P2E9 1410 aaKnown RBP22.53■■□□□ 1.2
UBXN2A-201ENST00000309033 FYB1O15117 783 aa22.53■■□□□ 1.2
UBXN2A-201ENST00000309033 NUCB2P80303 420 aa22.53■■□□□ 1.2
UBXN2A-201ENST00000309033 PRAM1Q96QH2 718 aa22.53■■□□□ 1.2
UBXN2A-201ENST00000309033 RSPH6AQ9H0K4 717 aa22.53■■□□□ 1.2
UBXN2A-201ENST00000309033 NFKBIBQ15653 356 aa22.53■■□□□ 1.2
UBXN2A-201ENST00000309033 TSR2Q969E8 191 aaKnown RBP22.53■■□□□ 1.2
UBXN2A-201ENST00000309033 ERICH2A1L162 156 aa22.52■■□□□ 1.2
UBXN2A-201ENST00000309033 NBPF8Q3BBV2 869 aa22.51■■□□□ 1.19
UBXN2A-201ENST00000309033 ABTB2Q8N961 1025 aa22.51■■□□□ 1.19
UBXN2A-201ENST00000309033 MEX3CQ5U5Q3 659 aaKnown RBP22.51■■□□□ 1.19
UBXN2A-201ENST00000309033 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
UBXN2A-201ENST00000309033 BCAR3O75815 825 aa22.5■■□□□ 1.19
UBXN2A-201ENST00000309033 PDZRN3Q9UPQ7 1066 aa22.5■■□□□ 1.19
UBXN2A-201ENST00000309033 SASS6Q6UVJ0 657 aa22.49■■□□□ 1.19
UBXN2A-201ENST00000309033 TCEAL9Q9UHQ7 104 aa22.49■■□□□ 1.19
UBXN2A-201ENST00000309033 ZNF428Q96B54 188 aa22.49■■□□□ 1.19
UBXN2A-201ENST00000309033 SLC12A5Q9H2X9 1139 aa22.49■■□□□ 1.19
UBXN2A-201ENST00000309033 NOB1Q9ULX3 412 aaKnown RBP22.49■■□□□ 1.19
UBXN2A-201ENST00000309033 TXNDC2Q86VQ3 553 aa22.48■■□□□ 1.19
UBXN2A-201ENST00000309033 SURF6O75683 361 aaKnown RBP22.48■■□□□ 1.19
UBXN2A-201ENST00000309033 AKNAQ7Z591 1439 aa22.48■■□□□ 1.19
UBXN2A-201ENST00000309033 FSD1Q9BTV5 496 aa22.48■■□□□ 1.19
UBXN2A-201ENST00000309033 CCDC27Q2M243 656 aa22.48■■□□□ 1.19
UBXN2A-201ENST00000309033 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
UBXN2A-201ENST00000309033 ESCO1Q5FWF5 840 aa22.47■■□□□ 1.19
UBXN2A-201ENST00000309033 TWISTNBQ3B726 338 aaPredicted RBP22.47■■□□□ 1.19
UBXN2A-201ENST00000309033 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
UBXN2A-201ENST00000309033 RALYLQ86SE5 291 aaKnown RBP22.47■■□□□ 1.19
UBXN2A-201ENST00000309033 FAM177BA6PVY3 158 aa22.47■■□□□ 1.19
UBXN2A-201ENST00000309033 CTDP1Q9Y5B0 961 aaPredicted RBP22.47■■□□□ 1.19
UBXN2A-201ENST00000309033 PRG4Q92954 1404 aaPredicted RBP22.47■■□□□ 1.19
UBXN2A-201ENST00000309033 SAMD1Q6SPF0 538 aaPredicted RBP22.47■■□□□ 1.19
UBXN2A-201ENST00000309033 HOMER1Q86YM7 354 aa22.47■■□□□ 1.19
UBXN2A-201ENST00000309033 AAMPQ13685 434 aa22.46■■□□□ 1.19
UBXN2A-201ENST00000309033 CNTROBQ8N137 903 aa22.46■■□□□ 1.19
UBXN2A-201ENST00000309033 BCL11BQ9C0K0 894 aaPredicted RBP22.46■■□□□ 1.19
UBXN2A-201ENST00000309033 DNAJC2Q99543 621 aaKnown RBP22.46■■□□□ 1.19
UBXN2A-201ENST00000309033 NINLQ9Y2I6 1382 aa22.46■■□□□ 1.19
UBXN2A-201ENST00000309033 SYNJ2O15056 1496 aa22.46■■□□□ 1.19
UBXN2A-201ENST00000309033 MTMR7Q9Y216 660 aa22.45■■□□□ 1.18
UBXN2A-201ENST00000309033 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
UBXN2A-201ENST00000309033 CCDC73Q6ZRK6 1079 aa22.44■■□□□ 1.18
UBXN2A-201ENST00000309033 CCDC47Q96A33 483 aaKnown RBP22.44■■□□□ 1.18
UBXN2A-201ENST00000309033 HOOK1Q9UJC3 728 aaKnown RBP22.44■■□□□ 1.18
UBXN2A-201ENST00000309033 C9orf84Q5VXU9 1444 aa22.44■■□□□ 1.18
UBXN2A-201ENST00000309033 NCAPD3P42695 1498 aa22.44■■□□□ 1.18
UBXN2A-201ENST00000309033 ANKRD20A12PQ8NF67 263 aa22.44■■□□□ 1.18
UBXN2A-201ENST00000309033 RBM33Q96EV2 1170 aaKnown RBP22.44■■□□□ 1.18
UBXN2A-201ENST00000309033 GAS2L2Q8NHY3 880 aa22.43■■□□□ 1.18
UBXN2A-201ENST00000309033 CDK19Q9BWU1 502 aa22.43■■□□□ 1.18
UBXN2A-201ENST00000309033 RNF214Q8ND24 703 aa22.42■■□□□ 1.18
UBXN2A-201ENST00000309033 FAM13BQ9NYF5 915 aa22.42■■□□□ 1.18
UBXN2A-201ENST00000309033 CABP1Q9NZU7 370 aa22.42■■□□□ 1.18
UBXN2A-201ENST00000309033 KIAA1107Q9UPP5 1409 aa22.42■■□□□ 1.18
UBXN2A-201ENST00000309033 GNAI3P08754 354 aa22.42■■□□□ 1.18
UBXN2A-201ENST00000309033 SAFBQ15424 915 aaKnown RBP eCLIP22.42■■□□□ 1.18
UBXN2A-201ENST00000309033 CLASRPQ8N2M8 674 aaKnown RBP22.41■■□□□ 1.18
UBXN2A-201ENST00000309033 IPO7O95373 1038 aaKnown RBP22.41■■□□□ 1.18
UBXN2A-201ENST00000309033 GPRASP1Q5JY77 1395 aa22.4■■□□□ 1.18
UBXN2A-201ENST00000309033 NESP48681 1621 aa22.4■■□□□ 1.18
UBXN2A-201ENST00000309033 SLC4A2P04920 1241 aa22.4■■□□□ 1.18
UBXN2A-201ENST00000309033 CCDC70Q6NSX1 233 aa22.4■■□□□ 1.18
UBXN2A-201ENST00000309033 NEK4P51957 841 aa22.4■■□□□ 1.18
UBXN2A-201ENST00000309033 SULT6B1Q6IMI4 303 aa22.39■■□□□ 1.18
UBXN2A-201ENST00000309033 IFT57Q9NWB7 429 aa22.39■■□□□ 1.18
UBXN2A-201ENST00000309033 EHBP1L1Q8N3D4 1523 aa22.39■■□□□ 1.17
UBXN2A-201ENST00000309033 CCDC184Q52MB2 194 aa22.39■■□□□ 1.17
UBXN2A-201ENST00000309033 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.39■■□□□ 1.17
UBXN2A-201ENST00000309033 PSMA5P28066 241 aa22.38■■□□□ 1.17
UBXN2A-201ENST00000309033 RBM42Q9BTD8 480 aaKnown RBP22.38■■□□□ 1.17
UBXN2A-201ENST00000309033 PLEKHO1Q53GL0 409 aaPredicted RBP22.37■■□□□ 1.17
UBXN2A-201ENST00000309033 CAVIN1Q6NZI2 390 aaKnown RBP22.37■■□□□ 1.17
UBXN2A-201ENST00000309033 MAP4K4O95819 1239 aaPredicted RBP22.36■■□□□ 1.17
UBXN2A-201ENST00000309033 HFM1A2PYH4 1435 aa22.36■■□□□ 1.17
UBXN2A-201ENST00000309033 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms