RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 EID1Q9Y6B2 187 aa13.18□□□□□ -0.3
MSRB3-201ENST00000308259 ASXL2Q76L83 1435 aa13.18□□□□□ -0.3
MSRB3-201ENST00000308259 WDR7Q9Y4E6 1490 aa13.18□□□□□ -0.3
MSRB3-201ENST00000308259 CDCA8Q53HL2 280 aa13.18□□□□□ -0.3
MSRB3-201ENST00000308259 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
MSRB3-201ENST00000308259 ABCC2Q92887 1545 aa13.17□□□□□ -0.3
MSRB3-201ENST00000308259 PTMAP06454 111 aaKnown RBP13.17□□□□□ -0.3
MSRB3-201ENST00000308259 XRCC6P12956 609 aaKnown RBP eCLIP13.17□□□□□ -0.3
MSRB3-201ENST00000308259 PTMSP20962 102 aa13.17□□□□□ -0.3
MSRB3-201ENST00000308259 NUTM2DQ5VT03 806 aaPredicted RBP13.17□□□□□ -0.3
MSRB3-201ENST00000308259 SLFN5Q08AF3 891 aa13.16□□□□□ -0.3
MSRB3-201ENST00000308259 KDM2BQ8NHM5 1336 aa13.16□□□□□ -0.3
MSRB3-201ENST00000308259 MRE11P49959 708 aa13.15□□□□□ -0.3
MSRB3-201ENST00000308259 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
MSRB3-201ENST00000308259 ZNF771Q7L3S4 317 aaPredicted RBP13.15□□□□□ -0.3
MSRB3-201ENST00000308259 BCL2L13Q9BXK5 485 aa13.15□□□□□ -0.3
MSRB3-201ENST00000308259 CARD14Q9BXL6 1004 aa13.15□□□□□ -0.3
MSRB3-201ENST00000308259 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
MSRB3-201ENST00000308259 ZMYM4Q5VZL5 1548 aa13.15□□□□□ -0.3
MSRB3-201ENST00000308259 MYO5CQ9NQX4 1742 aa13.15□□□□□ -0.3
MSRB3-201ENST00000308259 PANK1Q8TE04 598 aa13.15□□□□□ -0.3
MSRB3-201ENST00000308259 CENPQQ7L2Z9 268 aaPredicted RBP13.14□□□□□ -0.31
MSRB3-201ENST00000308259 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
MSRB3-201ENST00000308259 COG6Q9Y2V7 657 aa13.14□□□□□ -0.31
MSRB3-201ENST00000308259 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
MSRB3-201ENST00000308259 TRAK1Q9UPV9 953 aa13.13□□□□□ -0.31
MSRB3-201ENST00000308259 IGHDP01880 384 aa13.13□□□□□ -0.31
MSRB3-201ENST00000308259 UNC13BO14795 1591 aa13.13□□□□□ -0.31
MSRB3-201ENST00000308259 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.12□□□□□ -0.31
MSRB3-201ENST00000308259 ZNF521Q96K83 1311 aa13.12□□□□□ -0.31
MSRB3-201ENST00000308259 DUOX2Q9NRD8 1548 aa13.12□□□□□ -0.31
MSRB3-201ENST00000308259 CGNQ9P2M7 1197 aaKnown RBP13.12□□□□□ -0.31
MSRB3-201ENST00000308259 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
MSRB3-201ENST00000308259 TMEM132EQ6IEE7 984 aa13.12□□□□□ -0.31
MSRB3-201ENST00000308259 ADGRL1O94910 1474 aa13.11□□□□□ -0.31
MSRB3-201ENST00000308259 UQCRHLA0A096LP55 91 aa13.11□□□□□ -0.31
MSRB3-201ENST00000308259 UQCRHP07919 91 aa13.11□□□□□ -0.31
MSRB3-201ENST00000308259 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
MSRB3-201ENST00000308259 IQGAP3Q86VI3 1631 aa13.11□□□□□ -0.31
MSRB3-201ENST00000308259 SAFB2Q14151 953 aaKnown RBP eCLIP13.1□□□□□ -0.31
MSRB3-201ENST00000308259 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
MSRB3-201ENST00000308259 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
MSRB3-201ENST00000308259 PLCH2O75038 1416 aa13.1□□□□□ -0.31
MSRB3-201ENST00000308259 MAST1Q9Y2H9 1570 aa13.1□□□□□ -0.31
MSRB3-201ENST00000308259 RAPGEF3O95398 923 aa13.1□□□□□ -0.31
MSRB3-201ENST00000308259 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
MSRB3-201ENST00000308259 SLC12A5Q9H2X9 1139 aa13.1□□□□□ -0.31
MSRB3-201ENST00000308259 CBX1P83916 185 aa13.1□□□□□ -0.31
MSRB3-201ENST00000308259 IPO4Q8TEX9 1081 aaKnown RBP13.1□□□□□ -0.31
MSRB3-201ENST00000308259 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
MSRB3-201ENST00000308259 GRPEL1Q9HAV7 217 aa13.09□□□□□ -0.31
MSRB3-201ENST00000308259 FANCAO15360 1455 aa13.09□□□□□ -0.31
MSRB3-201ENST00000308259 ATP10AO60312 1499 aa13.09□□□□□ -0.31
MSRB3-201ENST00000308259 SCAF11Q99590 1463 aaKnown RBP13.09□□□□□ -0.31
MSRB3-201ENST00000308259 UHRF1BP1LA0JNW5 1464 aa13.08□□□□□ -0.31
MSRB3-201ENST00000308259 TRAK2O60296 914 aa13.08□□□□□ -0.32
MSRB3-201ENST00000308259 SEC24BO95487 1268 aa13.08□□□□□ -0.32
MSRB3-201ENST00000308259 MTERF4Q7Z6M4 381 aaKnown RBP13.08□□□□□ -0.32
MSRB3-201ENST00000308259 CHD1O14646 1710 aa13.08□□□□□ -0.32
MSRB3-201ENST00000308259 EIF2AK4Q9P2K8 1649 aaKnown RBP13.08□□□□□ -0.32
MSRB3-201ENST00000308259 PPP6R1Q9UPN7 881 aa13.08□□□□□ -0.32
MSRB3-201ENST00000308259 ASXL1Q8IXJ9 1541 aa13.07□□□□□ -0.32
MSRB3-201ENST00000308259 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
MSRB3-201ENST00000308259 GTF2E1P29083 439 aaPredicted RBP13.07□□□□□ -0.32
MSRB3-201ENST00000308259 MORC1Q86VD1 984 aa13.07□□□□□ -0.32
MSRB3-201ENST00000308259 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
MSRB3-201ENST00000308259 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.06□□□□□ -0.32
MSRB3-201ENST00000308259 PRDM4Q9UKN5 801 aa13.06□□□□□ -0.32
MSRB3-201ENST00000308259 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
MSRB3-201ENST00000308259 WWC1Q8IX03 1113 aa13.06□□□□□ -0.32
MSRB3-201ENST00000308259 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
MSRB3-201ENST00000308259 IGSF3O75054 1194 aa13.05□□□□□ -0.32
MSRB3-201ENST00000308259 MADDQ8WXG6 1647 aa13.05□□□□□ -0.32
MSRB3-201ENST00000308259 GOLGA6L22H0YM25 854 aa13.05□□□□□ -0.32
MSRB3-201ENST00000308259 PLXNC1O60486 1568 aa13.05□□□□□ -0.32
MSRB3-201ENST00000308259 EIF3AQ14152 1382 aaKnown RBP13.04□□□□□ -0.32
MSRB3-201ENST00000308259 TRMT2AQ8IZ69 625 aaKnown RBP13.04□□□□□ -0.32
MSRB3-201ENST00000308259 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
MSRB3-201ENST00000308259 CLTCL1P53675 1640 aa13.03□□□□□ -0.32
MSRB3-201ENST00000308259 RLBP1P12271 317 aa13.03□□□□□ -0.32
MSRB3-201ENST00000308259 TCP11L2Q8N4U5 519 aa13.03□□□□□ -0.32
MSRB3-201ENST00000308259 LAMC1P11047 1609 aa13.02□□□□□ -0.33
MSRB3-201ENST00000308259 MTHFSP49914 203 aa13.02□□□□□ -0.33
MSRB3-201ENST00000308259 PIK3C2GO75747 1445 aa13.02□□□□□ -0.33
MSRB3-201ENST00000308259 ABCC1P33527 1531 aa13.01□□□□□ -0.33
MSRB3-201ENST00000308259 RNF17Q9BXT8 1623 aaKnown RBP13.01□□□□□ -0.33
MSRB3-201ENST00000308259 INSRP06213 1382 aa13.01□□□□□ -0.33
MSRB3-201ENST00000308259 NSD3Q9BZ95 1437 aa13.01□□□□□ -0.33
MSRB3-201ENST00000308259 ERVK-7P63135 1459 aa13.01□□□□□ -0.33
MSRB3-201ENST00000308259 FTSJ3Q8IY81 847 aaKnown RBP13□□□□□ -0.33
MSRB3-201ENST00000308259 ZNF526Q8TF50 670 aaPredicted RBP13□□□□□ -0.33
MSRB3-201ENST00000308259 XPCQ01831 940 aaPredicted RBP13□□□□□ -0.33
MSRB3-201ENST00000308259 STK26Q9P289 416 aa13□□□□□ -0.33
MSRB3-201ENST00000308259 IRX3P78415 501 aaPredicted RBP13□□□□□ -0.33
MSRB3-201ENST00000308259 SLC52A1Q9NWF4 448 aa13□□□□□ -0.33
MSRB3-201ENST00000308259 PCDHB15Q9Y5E8 787 aa13□□□□□ -0.33
MSRB3-201ENST00000308259 ZCCHC11Q5TAX3 1644 aaKnown RBP12.99□□□□□ -0.33
MSRB3-201ENST00000308259 U2AF1L5P0DN76 240 aaPredicted RBP12.99□□□□□ -0.33
MSRB3-201ENST00000308259 MCM4P33991 863 aa12.99□□□□□ -0.33
MSRB3-201ENST00000308259 NASPP49321 788 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms