RNA–Protein interactions for RNA: ENST00000300215.7

EPB42-201, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 4,553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-201ENST00000300215 TMEM132EQ6IEE7 984 aa13.89□□□□□ -0.19
EPB42-201ENST00000300215 EVC2Q86UK5 1308 aa13.89□□□□□ -0.19
EPB42-201ENST00000300215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.89□□□□□ -0.19
EPB42-201ENST00000300215 APPP05067 770 aa13.89□□□□□ -0.19
EPB42-201ENST00000300215 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
EPB42-201ENST00000300215 RUFY2Q8WXA3 655 aa13.89□□□□□ -0.19
EPB42-201ENST00000300215 DIAPH1O60610 1272 aaKnown RBP13.88□□□□□ -0.19
EPB42-201ENST00000300215 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
EPB42-201ENST00000300215 CFAP70Q5T0N1 1121 aa13.88□□□□□ -0.19
EPB42-201ENST00000300215 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
EPB42-201ENST00000300215 CUL7Q14999 1698 aa13.88□□□□□ -0.19
EPB42-201ENST00000300215 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
EPB42-201ENST00000300215 SYNE3Q6ZMZ3 975 aa13.88□□□□□ -0.19
EPB42-201ENST00000300215 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
EPB42-201ENST00000300215 CNTLNQ9NXG0 1405 aa13.88□□□□□ -0.19
EPB42-201ENST00000300215 TPM1P09493 284 aa13.87□□□□□ -0.19
EPB42-201ENST00000300215 PANK1Q8TE04 598 aa13.87□□□□□ -0.19
EPB42-201ENST00000300215 API5Q9BZZ5 524 aaKnown RBP13.87□□□□□ -0.19
EPB42-201ENST00000300215 GRIN2AQ12879 1464 aa13.87□□□□□ -0.19
EPB42-201ENST00000300215 RAD21O60216 631 aa13.87□□□□□ -0.19
EPB42-201ENST00000300215 HOMER1Q86YM7 354 aa13.87□□□□□ -0.19
EPB42-201ENST00000300215 KIAA1107Q9UPP5 1409 aa13.87□□□□□ -0.19
EPB42-201ENST00000300215 ARHGEF11O15085 1522 aa13.86□□□□□ -0.19
EPB42-201ENST00000300215 NFKBIBQ15653 356 aa13.86□□□□□ -0.19
EPB42-201ENST00000300215 BCL11BQ9C0K0 894 aaPredicted RBP13.86□□□□□ -0.19
EPB42-201ENST00000300215 IPO7O95373 1038 aaKnown RBP13.85□□□□□ -0.19
EPB42-201ENST00000300215 C22orf23Q9BZE7 217 aa13.85□□□□□ -0.19
EPB42-201ENST00000300215 HMOX1P09601 288 aa13.85□□□□□ -0.19
EPB42-201ENST00000300215 FOSBP53539 338 aa13.85□□□□□ -0.19
EPB42-201ENST00000300215 TTC5Q8N0Z6 440 aa13.85□□□□□ -0.19
EPB42-201ENST00000300215 ZNF771Q7L3S4 317 aaPredicted RBP13.85□□□□□ -0.19
EPB42-201ENST00000300215 SCAPERQ9BY12 1400 aa13.84□□□□□ -0.19
EPB42-201ENST00000300215 FAM43AQ8N2R8 423 aa13.84□□□□□ -0.19
EPB42-201ENST00000300215 RNF214Q8ND24 703 aa13.84□□□□□ -0.19
EPB42-201ENST00000300215 CHMP4CQ96CF2 233 aa13.84□□□□□ -0.19
EPB42-201ENST00000300215 C11orf95C9JLR9 678 aaPredicted RBP13.84□□□□□ -0.19
EPB42-201ENST00000300215 TRIM29Q14134 588 aa13.84□□□□□ -0.19
EPB42-201ENST00000300215 PCMTD1Q96MG8 357 aaPredicted RBP13.84□□□□□ -0.19
EPB42-201ENST00000300215 SMC3Q9UQE7 1217 aa13.84□□□□□ -0.19
EPB42-201ENST00000300215 ABCC5O15440 1437 aa13.83□□□□□ -0.19
EPB42-201ENST00000300215 MAP3K1Q13233 1512 aa13.83□□□□□ -0.19
EPB42-201ENST00000300215 RAPGEF3O95398 923 aa13.82□□□□□ -0.2
EPB42-201ENST00000300215 PATL2C9JE40 543 aaKnown RBP13.82□□□□□ -0.2
EPB42-201ENST00000300215 TRDNQ13061 729 aa13.82□□□□□ -0.2
EPB42-201ENST00000300215 G3BP1Q13283 466 aaKnown RBP eCLIP13.82□□□□□ -0.2
EPB42-201ENST00000300215 GGNBP2Q9H3C7 697 aa13.82□□□□□ -0.2
EPB42-201ENST00000300215 NUCB2P80303 420 aa13.82□□□□□ -0.2
EPB42-201ENST00000300215 GPS2Q13227 327 aa13.82□□□□□ -0.2
EPB42-201ENST00000300215 LRRFIP1Q32MZ4 808 aaKnown RBP13.82□□□□□ -0.2
EPB42-201ENST00000300215 PTPRKQ15262 1439 aa13.82□□□□□ -0.2
EPB42-201ENST00000300215 DHX16O60231 1041 aaKnown RBP13.81□□□□□ -0.2
EPB42-201ENST00000300215 RNF20Q5VTR2 975 aa13.81□□□□□ -0.2
EPB42-201ENST00000300215 CDCA7LQ96GN5 454 aa13.81□□□□□ -0.2
EPB42-201ENST00000300215 SYTL4Q96C24 671 aaPredicted RBP13.81□□□□□ -0.2
EPB42-201ENST00000300215 INTS3Q68E01 1043 aaKnown RBP13.81□□□□□ -0.2
EPB42-201ENST00000300215 RUNDC1Q96C34 613 aa13.81□□□□□ -0.2
EPB42-201ENST00000300215 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
EPB42-201ENST00000300215 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
EPB42-201ENST00000300215 EVA1CP58658 441 aa13.8□□□□□ -0.2
EPB42-201ENST00000300215 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
EPB42-201ENST00000300215 TSPYL4Q9UJ04 414 aa13.8□□□□□ -0.2
EPB42-201ENST00000300215 ADAMTS8Q9UP79 889 aa13.79□□□□□ -0.2
EPB42-201ENST00000300215 MAGI1Q96QZ7 1491 aaPredicted RBP13.79□□□□□ -0.2
EPB42-201ENST00000300215 TPM2P07951 284 aa13.79□□□□□ -0.2
EPB42-201ENST00000300215 CCDC70Q6NSX1 233 aa13.79□□□□□ -0.2
EPB42-201ENST00000300215 SASS6Q6UVJ0 657 aa13.79□□□□□ -0.2
EPB42-201ENST00000300215 ANKRD30BQ9BXX2 1392 aa13.79□□□□□ -0.2
EPB42-201ENST00000300215 CCDC73Q6ZRK6 1079 aa13.78□□□□□ -0.2
EPB42-201ENST00000300215 ANKRD20A12PQ8NF67 263 aa13.78□□□□□ -0.2
EPB42-201ENST00000300215 DDX58O95786 925 aaKnown RBP13.78□□□□□ -0.2
EPB42-201ENST00000300215 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
EPB42-201ENST00000300215 AIMP1Q12904 312 aaKnown RBP13.78□□□□□ -0.2
EPB42-201ENST00000300215 NEUROD6Q96NK8 337 aa13.78□□□□□ -0.2
EPB42-201ENST00000300215 ROCK1Q13464 1354 aa13.78□□□□□ -0.2
EPB42-201ENST00000300215 GNAI1P63096 354 aa13.77□□□□□ -0.2
EPB42-201ENST00000300215 CAMSAP2Q08AD1 1489 aa13.77□□□□□ -0.2
EPB42-201ENST00000300215 MSH5O43196 834 aa13.77□□□□□ -0.21
EPB42-201ENST00000300215 VPS37DQ86XT2 251 aa13.77□□□□□ -0.21
EPB42-201ENST00000300215 CABP2Q9NPB3 220 aa13.77□□□□□ -0.21
EPB42-201ENST00000300215 SDF4Q9BRK5 362 aa13.76□□□□□ -0.21
EPB42-201ENST00000300215 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
EPB42-201ENST00000300215 NASPP49321 788 aaPredicted RBP13.76□□□□□ -0.21
EPB42-201ENST00000300215 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.76□□□□□ -0.21
EPB42-201ENST00000300215 R3HCC1Q9Y3T6 440 aaKnown RBP13.76□□□□□ -0.21
EPB42-201ENST00000300215 NCOA1Q15788 1441 aa13.76□□□□□ -0.21
EPB42-201ENST00000300215 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
EPB42-201ENST00000300215 MTHFSP49914 203 aa13.75□□□□□ -0.21
EPB42-201ENST00000300215 TCP11L2Q8N4U5 519 aa13.75□□□□□ -0.21
EPB42-201ENST00000300215 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
EPB42-201ENST00000300215 PSME1Q06323 249 aa13.74□□□□□ -0.21
EPB42-201ENST00000300215 CCDC47Q96A33 483 aaKnown RBP13.74□□□□□ -0.21
EPB42-201ENST00000300215 WASHC4Q2M389 1173 aa13.74□□□□□ -0.21
EPB42-201ENST00000300215 NUTM2GQ5VZR2 741 aa13.74□□□□□ -0.21
EPB42-201ENST00000300215 MNS1Q8NEH6 495 aa13.74□□□□□ -0.21
EPB42-201ENST00000300215 NOL10Q9BSC4 688 aaKnown RBP13.74□□□□□ -0.21
EPB42-201ENST00000300215 TRAK2O60296 914 aa13.74□□□□□ -0.21
EPB42-201ENST00000300215 SETQ01105 290 aaPredicted RBP13.74□□□□□ -0.21
EPB42-201ENST00000300215 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
EPB42-201ENST00000300215 BRPF3Q9ULD4 1205 aa13.74□□□□□ -0.21
EPB42-201ENST00000300215 MRE11P49959 708 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms