RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
MMP3-201ENST00000299855 NME8Q8N427 588 aa11.72□□□□□ -0.53
MMP3-201ENST00000299855 MICAL1Q8TDZ2 1067 aa11.72□□□□□ -0.53
MMP3-201ENST00000299855 NUP153P49790 1475 aaKnown RBP11.71□□□□□ -0.53
MMP3-201ENST00000299855 SIRT1Q96EB6 747 aa11.71□□□□□ -0.53
MMP3-201ENST00000299855 RPRD2Q5VT52 1461 aaKnown RBP11.71□□□□□ -0.54
MMP3-201ENST00000299855 MPHOSPH9Q99550 1183 aa11.7□□□□□ -0.54
MMP3-201ENST00000299855 SLC52A1Q9NWF4 448 aa11.7□□□□□ -0.54
MMP3-201ENST00000299855 ZNF622Q969S3 477 aaKnown RBP eCLIP11.7□□□□□ -0.54
MMP3-201ENST00000299855 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
MMP3-201ENST00000299855 BACH2Q9BYV9 841 aa11.69□□□□□ -0.54
MMP3-201ENST00000299855 DHX29Q7Z478 1369 aaKnown RBP11.69□□□□□ -0.54
MMP3-201ENST00000299855 ABCA9Q8IUA7 1624 aa11.69□□□□□ -0.54
MMP3-201ENST00000299855 PDE4AP27815 886 aa11.69□□□□□ -0.54
MMP3-201ENST00000299855 MCCD1P59942 119 aaPredicted RBP11.69□□□□□ -0.54
MMP3-201ENST00000299855 RBM26Q5T8P6 1007 aaKnown RBP11.69□□□□□ -0.54
MMP3-201ENST00000299855 KTN1Q86UP2 1357 aaKnown RBP11.68□□□□□ -0.54
MMP3-201ENST00000299855 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
MMP3-201ENST00000299855 KCNA1Q09470 495 aa11.68□□□□□ -0.54
MMP3-201ENST00000299855 ANKRD30BQ9BXX2 1392 aa11.68□□□□□ -0.54
MMP3-201ENST00000299855 LRRIQ1Q96JM4 1722 aa11.68□□□□□ -0.54
MMP3-201ENST00000299855 PNISRQ8TF01 805 aaKnown RBP11.67□□□□□ -0.54
MMP3-201ENST00000299855 SPINK5Q9NQ38 1064 aaPredicted RBP11.67□□□□□ -0.54
MMP3-201ENST00000299855 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
MMP3-201ENST00000299855 SREK1Q8WXA9 508 aaKnown RBP11.67□□□□□ -0.54
MMP3-201ENST00000299855 ADGRL1O94910 1474 aa11.66□□□□□ -0.54
MMP3-201ENST00000299855 AK7Q96M32 723 aa11.66□□□□□ -0.54
MMP3-201ENST00000299855 UBA5Q9GZZ9 404 aa11.66□□□□□ -0.54
MMP3-201ENST00000299855 ARAP3Q8WWN8 1544 aa11.65□□□□□ -0.54
MMP3-201ENST00000299855 PDE3BQ13370 1112 aa11.65□□□□□ -0.54
MMP3-201ENST00000299855 NBPF8Q3BBV2 869 aa11.65□□□□□ -0.54
MMP3-201ENST00000299855 CDK13Q14004 1512 aaKnown RBP11.65□□□□□ -0.54
MMP3-201ENST00000299855 GSE1Q14687 1217 aa11.65□□□□□ -0.54
MMP3-201ENST00000299855 MORC4Q8TE76 937 aa11.65□□□□□ -0.54
MMP3-201ENST00000299855 LRPPRCP42704 1394 aaKnown RBP11.65□□□□□ -0.54
MMP3-201ENST00000299855 TSR1Q2NL82 804 aaKnown RBP11.64□□□□□ -0.55
MMP3-201ENST00000299855 TSHZ1Q6ZSZ6 1077 aa11.64□□□□□ -0.55
MMP3-201ENST00000299855 ROCK1Q13464 1354 aa11.64□□□□□ -0.55
MMP3-201ENST00000299855 NEO1Q92859 1461 aa11.64□□□□□ -0.55
MMP3-201ENST00000299855 RRP1P56182 461 aaKnown RBP11.64□□□□□ -0.55
MMP3-201ENST00000299855 RRP7BPQ9NSQ0 103 aa11.64□□□□□ -0.55
MMP3-201ENST00000299855 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
MMP3-201ENST00000299855 RINLQ6ZS11 566 aa11.63□□□□□ -0.55
MMP3-201ENST00000299855 BRD4O60885 1362 aaPredicted RBP11.62□□□□□ -0.55
MMP3-201ENST00000299855 RAB11FIP3O75154 756 aa11.61□□□□□ -0.55
MMP3-201ENST00000299855 MYBPC2Q14324 1141 aa11.61□□□□□ -0.55
MMP3-201ENST00000299855 LONRF3Q496Y0 759 aa11.61□□□□□ -0.55
MMP3-201ENST00000299855 TMC1Q8TDI8 760 aa11.61□□□□□ -0.55
MMP3-201ENST00000299855 ATF5Q9Y2D1 282 aaPredicted RBP11.61□□□□□ -0.55
MMP3-201ENST00000299855 PROSER2Q86WR7 435 aaPredicted RBP11.6□□□□□ -0.55
MMP3-201ENST00000299855 MTA3Q9BTC8 594 aa11.6□□□□□ -0.55
MMP3-201ENST00000299855 INSRP06213 1382 aa11.6□□□□□ -0.55
MMP3-201ENST00000299855 RBM47A0AV96 593 aaKnown RBP11.59□□□□□ -0.55
MMP3-201ENST00000299855 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
MMP3-201ENST00000299855 RCAN3Q9UKA8 241 aa11.59□□□□□ -0.55
MMP3-201ENST00000299855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.59□□□□□ -0.55
MMP3-201ENST00000299855 KIF15Q9NS87 1388 aa11.58□□□□□ -0.56
MMP3-201ENST00000299855 CNGB1Q14028 1251 aaPredicted RBP11.58□□□□□ -0.56
MMP3-201ENST00000299855 EXOC6Q8TAG9 804 aa11.58□□□□□ -0.56
MMP3-201ENST00000299855 KIAA1522Q9P206 1035 aaPredicted RBP11.58□□□□□ -0.56
MMP3-201ENST00000299855 CFAP74Q9C0B2 1584 aa11.58□□□□□ -0.56
MMP3-201ENST00000299855 TCF3P15923 654 aa11.57□□□□□ -0.56
MMP3-201ENST00000299855 MBD5Q9P267 1494 aa11.57□□□□□ -0.56
MMP3-201ENST00000299855 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
MMP3-201ENST00000299855 RAPGEF3O95398 923 aa11.57□□□□□ -0.56
MMP3-201ENST00000299855 KRBA2Q6ZNG9 492 aa11.57□□□□□ -0.56
MMP3-201ENST00000299855 CHIC2Q9UKJ5 165 aa11.57□□□□□ -0.56
MMP3-201ENST00000299855 ZMYM4Q5VZL5 1548 aa11.57□□□□□ -0.56
MMP3-201ENST00000299855 PEX14O75381 377 aa11.56□□□□□ -0.56
MMP3-201ENST00000299855 NFKBIBQ15653 356 aa11.56□□□□□ -0.56
MMP3-201ENST00000299855 TTC37Q6PGP7 1564 aa11.56□□□□□ -0.56
MMP3-201ENST00000299855 SND1Q7KZF4 910 aaKnown RBP eCLIP11.56□□□□□ -0.56
MMP3-201ENST00000299855 UBXN4Q92575 508 aa11.56□□□□□ -0.56
MMP3-201ENST00000299855 MYBBP1AQ9BQG0 1328 aaKnown RBP11.56□□□□□ -0.56
MMP3-201ENST00000299855 KDM5CP41229 1560 aa11.55□□□□□ -0.56
MMP3-201ENST00000299855 FRMPD1Q5SYB0 1578 aa11.55□□□□□ -0.56
MMP3-201ENST00000299855 CALRP27797 417 aaKnown RBP11.55□□□□□ -0.56
MMP3-201ENST00000299855 AXDND1Q5T1B0 1012 aaPredicted RBP11.55□□□□□ -0.56
MMP3-201ENST00000299855 ZNF662Q6ZS27 426 aa11.55□□□□□ -0.56
MMP3-201ENST00000299855 C8orf37Q96NL8 207 aa11.55□□□□□ -0.56
MMP3-201ENST00000299855 FANCAO15360 1455 aa11.55□□□□□ -0.56
MMP3-201ENST00000299855 USP47Q96K76 1375 aa11.55□□□□□ -0.56
MMP3-201ENST00000299855 FOXD4Q12950 439 aaPredicted RBP11.55□□□□□ -0.56
MMP3-201ENST00000299855 FAM43AQ8N2R8 423 aa11.55□□□□□ -0.56
MMP3-201ENST00000299855 MRRFQ96E11 262 aaKnown RBP11.55□□□□□ -0.56
MMP3-201ENST00000299855 KIF14Q15058 1648 aa11.55□□□□□ -0.56
MMP3-201ENST00000299855 PPFIA4O75335 1185 aa11.54□□□□□ -0.56
MMP3-201ENST00000299855 FOSBP53539 338 aa11.54□□□□□ -0.56
MMP3-201ENST00000299855 SMC5Q8IY18 1101 aa11.54□□□□□ -0.56
MMP3-201ENST00000299855 FAM117AQ9C073 453 aa11.54□□□□□ -0.56
MMP3-201ENST00000299855 UHRF1BP1Q6BDS2 1440 aa11.54□□□□□ -0.56
MMP3-201ENST00000299855 TTC36A6NLP5 189 aa11.53□□□□□ -0.56
MMP3-201ENST00000299855 GTF2E1P29083 439 aaPredicted RBP11.53□□□□□ -0.56
MMP3-201ENST00000299855 CASC1Q6TDU7 716 aa11.53□□□□□ -0.56
MMP3-201ENST00000299855 MAGEC2Q9UBF1 373 aaPredicted RBP11.53□□□□□ -0.56
MMP3-201ENST00000299855 CCDC181Q5TID7 509 aa11.53□□□□□ -0.56
MMP3-201ENST00000299855 EVI5LQ96CN4 794 aa11.53□□□□□ -0.56
MMP3-201ENST00000299855 GIMAP6Q6P9H5 292 aa11.52□□□□□ -0.56
MMP3-201ENST00000299855 NBPF11Q86T75 865 aa11.52□□□□□ -0.56
MMP3-201ENST00000299855 RPS6KL1Q9Y6S9 549 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms