RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 IPO7O95373 1038 aaKnown RBP16.45■□□□□ 0.22
CHRFAM7A-201ENST00000299847 CCDC47Q96A33 483 aaKnown RBP16.45■□□□□ 0.22
CHRFAM7A-201ENST00000299847 CCDC43Q96MW1 224 aaKnown RBP16.45■□□□□ 0.22
CHRFAM7A-201ENST00000299847 RBM33Q96EV2 1170 aaKnown RBP16.44■□□□□ 0.22
CHRFAM7A-201ENST00000299847 DNAJC2Q99543 621 aaKnown RBP16.44■□□□□ 0.22
CHRFAM7A-201ENST00000299847 ANKRD20A12PQ8NF67 263 aa16.44■□□□□ 0.22
CHRFAM7A-201ENST00000299847 GPS2Q13227 327 aa16.43■□□□□ 0.22
CHRFAM7A-201ENST00000299847 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
CHRFAM7A-201ENST00000299847 NLRP2Q9NX02 1062 aa16.43■□□□□ 0.22
CHRFAM7A-201ENST00000299847 ATP2B1P20020 1258 aa16.42■□□□□ 0.22
CHRFAM7A-201ENST00000299847 MAP4K4O95819 1239 aaPredicted RBP16.41■□□□□ 0.22
CHRFAM7A-201ENST00000299847 CDCA7LQ96GN5 454 aa16.41■□□□□ 0.22
CHRFAM7A-201ENST00000299847 CEBPZQ03701 1054 aaKnown RBP16.41■□□□□ 0.22
CHRFAM7A-201ENST00000299847 HOOK1Q9UJC3 728 aaKnown RBP16.41■□□□□ 0.22
CHRFAM7A-201ENST00000299847 TOP2AP11388 1531 aaKnown RBP16.41■□□□□ 0.22
CHRFAM7A-201ENST00000299847 KIF7Q2M1P5 1343 aa16.4■□□□□ 0.22
CHRFAM7A-201ENST00000299847 UBTFL1P0CB47 393 aaPredicted RBP16.4■□□□□ 0.22
CHRFAM7A-201ENST00000299847 ROCK1Q13464 1354 aa16.4■□□□□ 0.22
CHRFAM7A-201ENST00000299847 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
CHRFAM7A-201ENST00000299847 CCDC73Q6ZRK6 1079 aa16.4■□□□□ 0.22
CHRFAM7A-201ENST00000299847 RAPGEF4Q8WZA2 1011 aa16.4■□□□□ 0.22
CHRFAM7A-201ENST00000299847 R3HCC1Q9Y3T6 440 aaKnown RBP16.4■□□□□ 0.22
CHRFAM7A-201ENST00000299847 CHMP4CQ96CF2 233 aa16.39■□□□□ 0.21
CHRFAM7A-201ENST00000299847 FSD1Q9BTV5 496 aa16.39■□□□□ 0.21
CHRFAM7A-201ENST00000299847 IKQ13123 557 aaPredicted RBP16.39■□□□□ 0.21
CHRFAM7A-201ENST00000299847 ERC2O15083 957 aa16.39■□□□□ 0.21
CHRFAM7A-201ENST00000299847 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
CHRFAM7A-201ENST00000299847 CT47A1Q5JQC4 288 aaPredicted RBP16.38■□□□□ 0.21
CHRFAM7A-201ENST00000299847 ZFYVE27Q5T4F4 411 aa16.38■□□□□ 0.21
CHRFAM7A-201ENST00000299847 PTPRGP23470 1445 aa16.38■□□□□ 0.21
CHRFAM7A-201ENST00000299847 GNAI1P63096 354 aa16.38■□□□□ 0.21
CHRFAM7A-201ENST00000299847 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
CHRFAM7A-201ENST00000299847 SAFBQ15424 915 aaKnown RBP eCLIP16.38■□□□□ 0.21
CHRFAM7A-201ENST00000299847 NFKBIBQ15653 356 aa16.38■□□□□ 0.21
CHRFAM7A-201ENST00000299847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.21
CHRFAM7A-201ENST00000299847 EPS15P42566 896 aa16.37■□□□□ 0.21
CHRFAM7A-201ENST00000299847 MPNDQ8N594 471 aa16.37■□□□□ 0.21
CHRFAM7A-201ENST00000299847 MNS1Q8NEH6 495 aa16.37■□□□□ 0.21
CHRFAM7A-201ENST00000299847 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
CHRFAM7A-201ENST00000299847 CAVIN1Q6NZI2 390 aaKnown RBP16.36■□□□□ 0.21
CHRFAM7A-201ENST00000299847 FMNL2Q96PY5 1086 aa16.36■□□□□ 0.21
CHRFAM7A-201ENST00000299847 RUFY1Q96T51 708 aa16.36■□□□□ 0.21
CHRFAM7A-201ENST00000299847 CDC45O75419 566 aa16.36■□□□□ 0.21
CHRFAM7A-201ENST00000299847 BRPF1P55201 1214 aaPredicted RBP16.36■□□□□ 0.21
CHRFAM7A-201ENST00000299847 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
CHRFAM7A-201ENST00000299847 FAM43AQ8N2R8 423 aa16.35■□□□□ 0.21
CHRFAM7A-201ENST00000299847 STK3Q13188 491 aa16.35■□□□□ 0.21
CHRFAM7A-201ENST00000299847 ATF3P18847 181 aa16.35■□□□□ 0.21
CHRFAM7A-201ENST00000299847 KRI1Q8N9T8 703 aaKnown RBP16.35■□□□□ 0.21
CHRFAM7A-201ENST00000299847 CCDC7Q96M83 1385 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 MTHFSP49914 203 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 OLFM4Q6UX06 510 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 CAGE1Q8TC20 777 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 TEX35Q5T0J7 233 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 SMC2O95347 1197 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 NLRP6P59044 892 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 NUCB2P80303 420 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 CNTROBQ8N137 903 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 ODF2Q5BJF6 829 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 TSR2Q969E8 191 aaKnown RBP16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
CHRFAM7A-201ENST00000299847 HSP90AB2PQ58FF8 381 aa16.33■□□□□ 0.21
CHRFAM7A-201ENST00000299847 FANCIQ9NVI1 1328 aa16.33■□□□□ 0.21
CHRFAM7A-201ENST00000299847 SPC24Q8NBT2 197 aa16.33■□□□□ 0.21
CHRFAM7A-201ENST00000299847 NASPP49321 788 aaPredicted RBP16.33■□□□□ 0.2
CHRFAM7A-201ENST00000299847 FAM69CQ0P6D2 419 aa16.33■□□□□ 0.2
CHRFAM7A-201ENST00000299847 SIL1Q9H173 461 aa16.33■□□□□ 0.2
CHRFAM7A-201ENST00000299847 STRN4Q9NRL3 753 aa16.33■□□□□ 0.2
CHRFAM7A-201ENST00000299847 SDF4Q9BRK5 362 aa16.33■□□□□ 0.2
CHRFAM7A-201ENST00000299847 NINLQ9Y2I6 1382 aa16.33■□□□□ 0.2
CHRFAM7A-201ENST00000299847 PRPF40AO75400 957 aaKnown RBP16.32■□□□□ 0.2
CHRFAM7A-201ENST00000299847 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
CHRFAM7A-201ENST00000299847 NOB1Q9ULX3 412 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-201ENST00000299847 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-201ENST00000299847 HSP90AB4PQ58FF6 505 aa16.31■□□□□ 0.2
CHRFAM7A-201ENST00000299847 ABTB2Q8N961 1025 aa16.31■□□□□ 0.2
CHRFAM7A-201ENST00000299847 PPP1R1BQ9UD71 204 aaPredicted RBP16.31■□□□□ 0.2
CHRFAM7A-201ENST00000299847 ESCO1Q5FWF5 840 aa16.3■□□□□ 0.2
CHRFAM7A-201ENST00000299847 BRMS1Q9HCU9 246 aa16.3■□□□□ 0.2
CHRFAM7A-201ENST00000299847 AK7Q96M32 723 aa16.3■□□□□ 0.2
CHRFAM7A-201ENST00000299847 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
CHRFAM7A-201ENST00000299847 TMEM132AQ24JP5 1023 aa16.3■□□□□ 0.2
CHRFAM7A-201ENST00000299847 NEK4P51957 841 aa16.3■□□□□ 0.2
CHRFAM7A-201ENST00000299847 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
CHRFAM7A-201ENST00000299847 BCAR3O75815 825 aa16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 TRIM5Q9C035 493 aa16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 FIBPO43427 364 aa16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 OFD1O75665 1012 aa16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 PRKAR2BP31323 418 aa16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 CNTLNQ9NXG0 1405 aa16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 RBM10P98175 930 aaKnown RBP16.29■□□□□ 0.2
CHRFAM7A-201ENST00000299847 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
CHRFAM7A-201ENST00000299847 TRAK2O60296 914 aa16.28■□□□□ 0.2
CHRFAM7A-201ENST00000299847 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
CHRFAM7A-201ENST00000299847 FANCD2Q9BXW9 1451 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms