RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 NLRP13Q86W25 1043 aa14.27□□□□□ -0.13
COPS2-201ENST00000299259 NINLQ9Y2I6 1382 aa14.26□□□□□ -0.13
COPS2-201ENST00000299259 AMER1Q5JTC6 1135 aaPredicted RBP14.26□□□□□ -0.13
COPS2-201ENST00000299259 FAM9BQ8IZU0 186 aa14.26□□□□□ -0.13
COPS2-201ENST00000299259 BCANQ96GW7 911 aa14.26□□□□□ -0.13
COPS2-201ENST00000299259 EID1Q9Y6B2 187 aa14.26□□□□□ -0.13
COPS2-201ENST00000299259 MED14O60244 1454 aa14.26□□□□□ -0.13
COPS2-201ENST00000299259 LTKP29376 864 aa14.25□□□□□ -0.13
COPS2-201ENST00000299259 TMC1Q8TDI8 760 aa14.25□□□□□ -0.13
COPS2-201ENST00000299259 FAM135BQ49AJ0 1406 aa14.25□□□□□ -0.13
COPS2-201ENST00000299259 MINK1Q8N4C8 1332 aaPredicted RBP14.25□□□□□ -0.13
COPS2-201ENST00000299259 HNRNPUQ00839 825 aaKnown RBP eCLIP14.25□□□□□ -0.13
COPS2-201ENST00000299259 TXNDC2Q86VQ3 553 aa14.25□□□□□ -0.13
COPS2-201ENST00000299259 THEMISQ8N1K5 641 aaPredicted RBP14.25□□□□□ -0.13
COPS2-201ENST00000299259 ATAD2Q6PL18 1390 aa14.25□□□□□ -0.13
COPS2-201ENST00000299259 NSD3Q9BZ95 1437 aa14.24□□□□□ -0.13
COPS2-201ENST00000299259 PLEKHH1Q9ULM0 1364 aa14.24□□□□□ -0.13
COPS2-201ENST00000299259 ADGRB2O60241 1585 aa14.24□□□□□ -0.13
COPS2-201ENST00000299259 SRPK2P78362 688 aaKnown RBP14.23□□□□□ -0.13
COPS2-201ENST00000299259 ANKRD36BQ8N2N9 1353 aa14.23□□□□□ -0.13
COPS2-201ENST00000299259 ANKRD26Q9UPS8 1709 aa14.23□□□□□ -0.13
COPS2-201ENST00000299259 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
COPS2-201ENST00000299259 CABP2Q9NPB3 220 aa14.22□□□□□ -0.13
COPS2-201ENST00000299259 XRN1Q8IZH2 1706 aaKnown RBP14.22□□□□□ -0.13
COPS2-201ENST00000299259 SLC12A5Q9H2X9 1139 aa14.22□□□□□ -0.13
COPS2-201ENST00000299259 KIF20BQ96Q89 1820 aa14.21□□□□□ -0.13
COPS2-201ENST00000299259 CARD14Q9BXL6 1004 aa14.21□□□□□ -0.13
COPS2-201ENST00000299259 WAPLQ7Z5K2 1190 aa14.2□□□□□ -0.14
COPS2-201ENST00000299259 PNISRQ8TF01 805 aaKnown RBP14.2□□□□□ -0.14
COPS2-201ENST00000299259 ITSN1Q15811 1721 aa14.2□□□□□ -0.14
COPS2-201ENST00000299259 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.19□□□□□ -0.14
COPS2-201ENST00000299259 SIRT1Q96EB6 747 aa14.19□□□□□ -0.14
COPS2-201ENST00000299259 A0A1W2PP64 1363 aa14.19□□□□□ -0.14
COPS2-201ENST00000299259 ROBO2Q9HCK4 1378 aa14.19□□□□□ -0.14
COPS2-201ENST00000299259 GTF3C3Q9Y5Q9 886 aa14.19□□□□□ -0.14
COPS2-201ENST00000299259 PTCH1Q13635 1447 aa14.19□□□□□ -0.14
COPS2-201ENST00000299259 PTPRUQ92729 1446 aa14.18□□□□□ -0.14
COPS2-201ENST00000299259 ATP7BP35670 1465 aa14.18□□□□□ -0.14
COPS2-201ENST00000299259 CD163L1Q9NR16 1453 aa14.18□□□□□ -0.14
COPS2-201ENST00000299259 TOPAZ1Q8N9V7 1692 aa14.18□□□□□ -0.14
COPS2-201ENST00000299259 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
COPS2-201ENST00000299259 SLC26A8Q96RN1 970 aa14.17□□□□□ -0.14
COPS2-201ENST00000299259 CDK19Q9BWU1 502 aa14.17□□□□□ -0.14
COPS2-201ENST00000299259 NSD2O96028 1365 aa14.17□□□□□ -0.14
COPS2-201ENST00000299259 AKAP12Q02952 1782 aa14.17□□□□□ -0.14
COPS2-201ENST00000299259 MON2Q7Z3U7 1717 aa14.17□□□□□ -0.14
COPS2-201ENST00000299259 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
COPS2-201ENST00000299259 TBX22Q9Y458 520 aa14.16□□□□□ -0.14
COPS2-201ENST00000299259 CHD2O14647 1828 aaKnown RBP14.16□□□□□ -0.14
COPS2-201ENST00000299259 CGNL1Q0VF96 1302 aa14.16□□□□□ -0.14
COPS2-201ENST00000299259 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
COPS2-201ENST00000299259 TERF2IPQ9NYB0 399 aa14.14□□□□□ -0.15
COPS2-201ENST00000299259 WASLO00401 505 aaPredicted RBP14.14□□□□□ -0.15
COPS2-201ENST00000299259 PIK3R4Q99570 1358 aa14.13□□□□□ -0.15
COPS2-201ENST00000299259 INSRP06213 1382 aa14.13□□□□□ -0.15
COPS2-201ENST00000299259 BLMP54132 1417 aaPredicted RBP14.13□□□□□ -0.15
COPS2-201ENST00000299259 PPIP5K1Q6PFW1 1433 aa14.12□□□□□ -0.15
COPS2-201ENST00000299259 ANKLE2Q86XL3 938 aa14.12□□□□□ -0.15
COPS2-201ENST00000299259 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
COPS2-201ENST00000299259 HDGFL2Q7Z4V5 671 aaPredicted RBP14.11□□□□□ -0.15
COPS2-201ENST00000299259 MORC1Q86VD1 984 aa14.1□□□□□ -0.15
COPS2-201ENST00000299259 AMOTL2Q9Y2J4 779 aa14.1□□□□□ -0.15
COPS2-201ENST00000299259 NALCNQ8IZF0 1738 aa14.1□□□□□ -0.15
COPS2-201ENST00000299259 CABP1Q9NZU7 370 aa14.1□□□□□ -0.15
COPS2-201ENST00000299259 NRKQ7Z2Y5 1582 aa14.09□□□□□ -0.15
COPS2-201ENST00000299259 RGPD8O14715 1765 aaPredicted RBP14.09□□□□□ -0.15
COPS2-201ENST00000299259 NPHP4O75161 1426 aaPredicted RBP14.09□□□□□ -0.15
COPS2-201ENST00000299259 FMN2Q9NZ56 1722 aa14.09□□□□□ -0.15
COPS2-201ENST00000299259 CPSF1Q10570 1443 aaKnown RBP14.08□□□□□ -0.15
COPS2-201ENST00000299259 EDC4Q6P2E9 1401 aaKnown RBP14.07□□□□□ -0.16
COPS2-201ENST00000299259 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.16
COPS2-201ENST00000299259 NUDT16Q96DE0 195 aaKnown RBP14.07□□□□□ -0.16
COPS2-201ENST00000299259 POLR3AO14802 1390 aaPredicted RBP14.07□□□□□ -0.16
COPS2-201ENST00000299259 NWD1Q149M9 1564 aa14.07□□□□□ -0.16
COPS2-201ENST00000299259 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
COPS2-201ENST00000299259 PRR36Q9H6K5 1346 aa14.06□□□□□ -0.16
COPS2-201ENST00000299259 NKTRP30414 1462 aaKnown RBP14.05□□□□□ -0.16
COPS2-201ENST00000299259 KCNA6P17658 529 aa14.04□□□□□ -0.16
COPS2-201ENST00000299259 TNNT2P45379 298 aaPredicted RBP14.04□□□□□ -0.16
COPS2-201ENST00000299259 GGNBP2Q9H3C7 697 aa14.03□□□□□ -0.16
COPS2-201ENST00000299259 MAP2P11137 1827 aaKnown RBP14.03□□□□□ -0.16
COPS2-201ENST00000299259 FYB1O15117 783 aa14.02□□□□□ -0.16
COPS2-201ENST00000299259 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.16
COPS2-201ENST00000299259 ADAMTS8Q9UP79 889 aa14.02□□□□□ -0.16
COPS2-201ENST00000299259 ANKARQ7Z5J8 1434 aa14.02□□□□□ -0.17
COPS2-201ENST00000299259 NCKAP5LQ9HCH0 1330 aa14.01□□□□□ -0.17
COPS2-201ENST00000299259 SENP3-EIF4A1A0A087X0R7 540 aa14.01□□□□□ -0.17
COPS2-201ENST00000299259 CFAP53Q96M91 514 aa14□□□□□ -0.17
COPS2-201ENST00000299259 MTHFSP49914 203 aa14□□□□□ -0.17
COPS2-201ENST00000299259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14□□□□□ -0.17
COPS2-201ENST00000299259 COL3A1P02461 1466 aaPredicted RBP13.99□□□□□ -0.17
COPS2-201ENST00000299259 USP6P35125 1406 aa13.99□□□□□ -0.17
COPS2-201ENST00000299259 ADGRL3Q9HAR2 1447 aa13.99□□□□□ -0.17
COPS2-201ENST00000299259 NUTM2FA1L443 756 aa13.98□□□□□ -0.17
COPS2-201ENST00000299259 NEFLP07196 543 aa13.98□□□□□ -0.17
COPS2-201ENST00000299259 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
COPS2-201ENST00000299259 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
COPS2-201ENST00000299259 PLEKHG3A1L390 1219 aa13.97□□□□□ -0.17
COPS2-201ENST00000299259 ACEP12821 1306 aa13.97□□□□□ -0.17
COPS2-201ENST00000299259 NME9Q86XW9 330 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms