RNA–Protein interactions for RNA: ENST00000297904.3

VEGFD-201, Transcript of vascular endothelial growth factor D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFD, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFD-201ENST00000297904 SOCS7O14512 581 aa9.11□□□□□ -0.95
VEGFD-201ENST00000297904 HNRNPUQ00839 825 aaKnown RBP eCLIP9.11□□□□□ -0.95
VEGFD-201ENST00000297904 ERICH6BQ5W0A0 696 aa9.11□□□□□ -0.95
VEGFD-201ENST00000297904 ERICH3Q5RHP9 1530 aa9.11□□□□□ -0.95
VEGFD-201ENST00000297904 TOP2BQ02880 1626 aa9.1□□□□□ -0.95
VEGFD-201ENST00000297904 PITPNM1O00562 1244 aa9.1□□□□□ -0.95
VEGFD-201ENST00000297904 QPCTQ16769 361 aa9.1□□□□□ -0.95
VEGFD-201ENST00000297904 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
VEGFD-201ENST00000297904 C8orf37Q96NL8 207 aa9.1□□□□□ -0.95
VEGFD-201ENST00000297904 ERCC3P19447 782 aa9.1□□□□□ -0.95
VEGFD-201ENST00000297904 PPP4R2Q9NY27 417 aa9.1□□□□□ -0.95
VEGFD-201ENST00000297904 USP17L8P0C7I0 530 aa9.09□□□□□ -0.95
VEGFD-201ENST00000297904 ZNF710Q8N1W2 664 aa9.09□□□□□ -0.95
VEGFD-201ENST00000297904 ABCA10Q8WWZ4 1543 aa9.09□□□□□ -0.95
VEGFD-201ENST00000297904 B4GALNT3Q6L9W6 998 aa9.09□□□□□ -0.95
VEGFD-201ENST00000297904 GJD4Q96KN9 370 aaPredicted RBP9.09□□□□□ -0.95
VEGFD-201ENST00000297904 TMEM106CQ9BVX2 250 aa9.09□□□□□ -0.95
VEGFD-201ENST00000297904 NDUFB9Q9Y6M9 179 aa9.09□□□□□ -0.95
VEGFD-201ENST00000297904 TDRD9Q8NDG6 1382 aaKnown RBP9.08□□□□□ -0.96
VEGFD-201ENST00000297904 PRXQ9BXM0 1461 aa9.08□□□□□ -0.96
VEGFD-201ENST00000297904 DIXDC1Q155Q3 683 aa9.08□□□□□ -0.96
VEGFD-201ENST00000297904 TSR1Q2NL82 804 aaKnown RBP9.08□□□□□ -0.96
VEGFD-201ENST00000297904 ARID4BQ4LE39 1312 aaPredicted RBP9.08□□□□□ -0.96
VEGFD-201ENST00000297904 WASHC4Q2M389 1173 aa9.07□□□□□ -0.96
VEGFD-201ENST00000297904 ANKRD13AQ8IZ07 590 aa9.07□□□□□ -0.96
VEGFD-201ENST00000297904 GRIN2BQ13224 1484 aa9.07□□□□□ -0.96
VEGFD-201ENST00000297904 MAGI1Q96QZ7 1491 aaPredicted RBP9.07□□□□□ -0.96
VEGFD-201ENST00000297904 C2orf72A6NCS6 295 aa9.07□□□□□ -0.96
VEGFD-201ENST00000297904 ZC3H6P61129 1189 aaKnown RBP9.07□□□□□ -0.96
VEGFD-201ENST00000297904 PHLDB3Q6NSJ2 640 aa9.07□□□□□ -0.96
VEGFD-201ENST00000297904 ALG2Q9H553 416 aa9.07□□□□□ -0.96
VEGFD-201ENST00000297904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.07□□□□□ -0.96
VEGFD-201ENST00000297904 NOP58Q9Y2X3 529 aaKnown RBP9.07□□□□□ -0.96
VEGFD-201ENST00000297904 CHD1O14646 1710 aa9.07□□□□□ -0.96
VEGFD-201ENST00000297904 GPR37L1O60883 481 aa9.06□□□□□ -0.96
VEGFD-201ENST00000297904 UBXN4Q92575 508 aa9.06□□□□□ -0.96
VEGFD-201ENST00000297904 MAFBQ9Y5Q3 323 aaPredicted RBP9.06□□□□□ -0.96
VEGFD-201ENST00000297904 GAPVD1Q14C86 1478 aa9.06□□□□□ -0.96
VEGFD-201ENST00000297904 ABCA5Q8WWZ7 1642 aa9.06□□□□□ -0.96
VEGFD-201ENST00000297904 NCLP19338 710 aaKnown RBP9.05□□□□□ -0.96
VEGFD-201ENST00000297904 FAM50AQ14320 339 aaKnown RBP9.05□□□□□ -0.96
VEGFD-201ENST00000297904 SPIRE2Q8WWL2 714 aa9.05□□□□□ -0.96
VEGFD-201ENST00000297904 PBRM1Q86U86 1689 aa9.05□□□□□ -0.96
VEGFD-201ENST00000297904 SNAPC4Q5SXM2 1469 aa9.05□□□□□ -0.96
VEGFD-201ENST00000297904 ANKRD62A6NC57 917 aa9.05□□□□□ -0.96
VEGFD-201ENST00000297904 MICALL2Q8IY33 904 aa9.05□□□□□ -0.96
VEGFD-201ENST00000297904 KDM4AO75164 1064 aa9.04□□□□□ -0.96
VEGFD-201ENST00000297904 RTL5Q5HYW3 569 aaPredicted RBP9.04□□□□□ -0.96
VEGFD-201ENST00000297904 DPY19L2Q6NUT2 758 aa9.04□□□□□ -0.96
VEGFD-201ENST00000297904 CERS3Q8IU89 383 aa9.04□□□□□ -0.96
VEGFD-201ENST00000297904 STK32AQ8WU08 396 aa9.04□□□□□ -0.96
VEGFD-201ENST00000297904 NAALADL2Q58DX5 795 aa9.04□□□□□ -0.96
VEGFD-201ENST00000297904 TMEM164Q5U3C3 297 aa9.04□□□□□ -0.96
VEGFD-201ENST00000297904 MAP3K7O43318 606 aa9.03□□□□□ -0.96
VEGFD-201ENST00000297904 EVI5O60447 810 aa9.03□□□□□ -0.96
VEGFD-201ENST00000297904 PAK3O75914 559 aaPredicted RBP9.03□□□□□ -0.96
VEGFD-201ENST00000297904 PRR7Q8TB68 274 aa9.03□□□□□ -0.96
VEGFD-201ENST00000297904 TONSLQ96HA7 1378 aa9.03□□□□□ -0.96
VEGFD-201ENST00000297904 SYNJ2O15056 1496 aa9.02□□□□□ -0.96
VEGFD-201ENST00000297904 ARHGAP35Q9NRY4 1499 aa9.02□□□□□ -0.96
VEGFD-201ENST00000297904 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.97
VEGFD-201ENST00000297904 GIMAP6Q6P9H5 292 aa9.02□□□□□ -0.97
VEGFD-201ENST00000297904 RSBN1LQ6PCB5 846 aaPredicted RBP9.02□□□□□ -0.97
VEGFD-201ENST00000297904 RBM42Q9BTD8 480 aaKnown RBP9.02□□□□□ -0.97
VEGFD-201ENST00000297904 HMX1Q9NP08 348 aaPredicted RBP9.02□□□□□ -0.97
VEGFD-201ENST00000297904 SPTLC1O15269 473 aa9.02□□□□□ -0.97
VEGFD-201ENST00000297904 PXYLP1Q8TE99 480 aa9.02□□□□□ -0.97
VEGFD-201ENST00000297904 ANO8Q9HCE9 1232 aaPredicted RBP9.02□□□□□ -0.97
VEGFD-201ENST00000297904 ZMIZ1Q9ULJ6 1067 aa9.02□□□□□ -0.97
VEGFD-201ENST00000297904 EN1Q05925 392 aaPredicted RBP9.01□□□□□ -0.97
VEGFD-201ENST00000297904 TBC1D9Q6ZT07 1266 aa9.01□□□□□ -0.97
VEGFD-201ENST00000297904 ILDR1Q86SU0 546 aaPredicted RBP9.01□□□□□ -0.97
VEGFD-201ENST00000297904 PCDHB15Q9Y5E8 787 aa9.01□□□□□ -0.97
VEGFD-201ENST00000297904 ANKRD33BA6NCL7 494 aa9□□□□□ -0.97
VEGFD-201ENST00000297904 LILRB3O75022 631 aa9□□□□□ -0.97
VEGFD-201ENST00000297904 OATP04181 439 aa9□□□□□ -0.97
VEGFD-201ENST00000297904 SERPINB4P48594 390 aa9□□□□□ -0.97
VEGFD-201ENST00000297904 MOXD2PA6NHM9 499 aa9□□□□□ -0.97
VEGFD-201ENST00000297904 SOWAHDA6NJG2 315 aa9□□□□□ -0.97
VEGFD-201ENST00000297904 NPAS4Q8IUM7 802 aa9□□□□□ -0.97
VEGFD-201ENST00000297904 CHMP7Q8WUX9 453 aaPredicted RBP9□□□□□ -0.97
VEGFD-201ENST00000297904 RBM33Q96EV2 1170 aaKnown RBP9□□□□□ -0.97
VEGFD-201ENST00000297904 KIF3CO14782 793 aa8.99□□□□□ -0.97
VEGFD-201ENST00000297904 TAGLNQ01995 201 aaKnown RBP8.99□□□□□ -0.97
VEGFD-201ENST00000297904 TUSC1Q2TAM9 212 aa8.99□□□□□ -0.97
VEGFD-201ENST00000297904 KIF27Q86VH2 1401 aa8.99□□□□□ -0.97
VEGFD-201ENST00000297904 RIMBP3CA6NJZ7 1639 aa8.99□□□□□ -0.97
VEGFD-201ENST00000297904 RIMBP3BA6NNM3 1639 aa8.99□□□□□ -0.97
VEGFD-201ENST00000297904 RIMBP3Q9UFD9 1639 aa8.99□□□□□ -0.97
VEGFD-201ENST00000297904 TIAM1Q13009 1591 aa8.99□□□□□ -0.97
VEGFD-201ENST00000297904 MAP3K1Q13233 1512 aa8.99□□□□□ -0.97
VEGFD-201ENST00000297904 PHLDB1Q86UU1 1377 aa8.99□□□□□ -0.97
VEGFD-201ENST00000297904 NUTM2BA6NNL0 878 aaPredicted RBP8.98□□□□□ -0.97
VEGFD-201ENST00000297904 NUTM2EB1AL46 878 aaPredicted RBP8.98□□□□□ -0.97
VEGFD-201ENST00000297904 RECKO95980 971 aa8.98□□□□□ -0.97
VEGFD-201ENST00000297904 NUTM2DQ5VT03 806 aaPredicted RBP8.98□□□□□ -0.97
VEGFD-201ENST00000297904 NUTM2AQ8IVF1 878 aaPredicted RBP8.98□□□□□ -0.97
VEGFD-201ENST00000297904 TRPC6Q9Y210 931 aa8.98□□□□□ -0.97
VEGFD-201ENST00000297904 ADAMTS12P58397 1594 aa8.98□□□□□ -0.97
VEGFD-201ENST00000297904 NDUFV2P19404 249 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms