RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 MED14O60244 1454 aa31.12■■■□□ 2.57
PTX3-201ENST00000295927 WAPLQ7Z5K2 1190 aa31.1■■■□□ 2.57
PTX3-201ENST00000295927 PLEKHH1Q9ULM0 1364 aa31.1■■■□□ 2.57
PTX3-201ENST00000295927 TECPR2O15040 1411 aa31.09■■■□□ 2.57
PTX3-201ENST00000295927 TMC1Q8TDI8 760 aa31.09■■■□□ 2.57
PTX3-201ENST00000295927 CABP2Q9NPB3 220 aa31.09■■■□□ 2.57
PTX3-201ENST00000295927 AMER1Q5JTC6 1135 aaPredicted RBP31.08■■■□□ 2.57
PTX3-201ENST00000295927 CPS1P31327 1500 aa31.08■■■□□ 2.57
PTX3-201ENST00000295927 SLC12A5Q9H2X9 1139 aa31.08■■■□□ 2.57
PTX3-201ENST00000295927 SLC26A8Q96RN1 970 aa31.06■■■□□ 2.56
PTX3-201ENST00000295927 SIRT1Q96EB6 747 aa31.06■■■□□ 2.56
PTX3-201ENST00000295927 CARD14Q9BXL6 1004 aa31.06■■■□□ 2.56
PTX3-201ENST00000295927 FAM135BQ49AJ0 1406 aa31.05■■■□□ 2.56
PTX3-201ENST00000295927 SRPK2P78362 688 aaKnown RBP31.05■■■□□ 2.56
PTX3-201ENST00000295927 BRD4O60885 1362 aaPredicted RBP31.03■■■□□ 2.56
PTX3-201ENST00000295927 NPC1L1Q9UHC9 1359 aa31.03■■■□□ 2.56
PTX3-201ENST00000295927 DIP2AQ14689 1571 aa31.03■■■□□ 2.56
PTX3-201ENST00000295927 FAM9BQ8IZU0 186 aa31.02■■■□□ 2.56
PTX3-201ENST00000295927 TBX22Q9Y458 520 aa31.02■■■□□ 2.56
PTX3-201ENST00000295927 CDK19Q9BWU1 502 aa31■■■□□ 2.55
PTX3-201ENST00000295927 NLRP13Q86W25 1043 aa31■■■□□ 2.55
PTX3-201ENST00000295927 ATAD2Q6PL18 1390 aa31■■■□□ 2.55
PTX3-201ENST00000295927 PTPRUQ92729 1446 aa30.99■■■□□ 2.55
PTX3-201ENST00000295927 ROBO2Q9HCK4 1378 aa30.98■■■□□ 2.55
PTX3-201ENST00000295927 NINLQ9Y2I6 1382 aa30.98■■■□□ 2.55
PTX3-201ENST00000295927 NSD3Q9BZ95 1437 aa30.96■■■□□ 2.55
PTX3-201ENST00000295927 ANKRD36BQ8N2N9 1353 aa30.96■■■□□ 2.55
PTX3-201ENST00000295927 ANKLE2Q86XL3 938 aa30.95■■■□□ 2.55
PTX3-201ENST00000295927 PNISRQ8TF01 805 aaKnown RBP30.93■■■□□ 2.54
PTX3-201ENST00000295927 USP32Q8NFA0 1604 aa30.93■■■□□ 2.54
PTX3-201ENST00000295927 HNRNPUQ00839 825 aaKnown RBP eCLIP30.92■■■□□ 2.54
PTX3-201ENST00000295927 AMOTL2Q9Y2J4 779 aa30.91■■■□□ 2.54
PTX3-201ENST00000295927 WASLO00401 505 aaPredicted RBP30.9■■■□□ 2.54
PTX3-201ENST00000295927 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.89■■■□□ 2.54
PTX3-201ENST00000295927 PPP2R1AP30153 589 aa30.88■■■□□ 2.53
PTX3-201ENST00000295927 A0A1W2PP64 1363 aa30.87■■■□□ 2.53
PTX3-201ENST00000295927 XRN1Q8IZH2 1706 aaKnown RBP30.87■■■□□ 2.53
PTX3-201ENST00000295927 CD163L1Q9NR16 1453 aa30.86■■■□□ 2.53
PTX3-201ENST00000295927 PTCH1Q13635 1447 aa30.86■■■□□ 2.53
PTX3-201ENST00000295927 ADGRB2O60241 1585 aa30.86■■■□□ 2.53
PTX3-201ENST00000295927 PIK3R4Q99570 1358 aa30.85■■■□□ 2.53
PTX3-201ENST00000295927 TERF2IPQ9NYB0 399 aa30.84■■■□□ 2.53
PTX3-201ENST00000295927 CABP1Q9NZU7 370 aa30.83■■■□□ 2.53
PTX3-201ENST00000295927 CGNL1Q0VF96 1302 aa30.83■■■□□ 2.53
PTX3-201ENST00000295927 CHD2O14647 1828 aaKnown RBP30.79■■■□□ 2.52
PTX3-201ENST00000295927 HDGFL2Q7Z4V5 671 aaPredicted RBP30.79■■■□□ 2.52
PTX3-201ENST00000295927 ATP7BP35670 1465 aa30.78■■■□□ 2.52
PTX3-201ENST00000295927 NUDT16Q96DE0 195 aaKnown RBP30.77■■■□□ 2.52
PTX3-201ENST00000295927 NPHP4O75161 1426 aaPredicted RBP30.77■■■□□ 2.52
PTX3-201ENST00000295927 NSD2O96028 1365 aa30.76■■■□□ 2.52
PTX3-201ENST00000295927 MORC1Q86VD1 984 aa30.76■■■□□ 2.51
PTX3-201ENST00000295927 PPIP5K1Q6PFW1 1433 aa30.76■■■□□ 2.51
PTX3-201ENST00000295927 KCNA6P17658 529 aa30.75■■■□□ 2.51
PTX3-201ENST00000295927 CCDC61Q9Y6R9 512 aa30.73■■■□□ 2.51
PTX3-201ENST00000295927 PRR36Q9H6K5 1346 aa30.72■■■□□ 2.51
PTX3-201ENST00000295927 NCKAP5LQ9HCH0 1330 aa30.72■■■□□ 2.51
PTX3-201ENST00000295927 SCAF1Q9H7N4 1312 aaKnown RBP30.71■■■□□ 2.51
PTX3-201ENST00000295927 ZBED9Q6R2W3 1325 aa30.7■■■□□ 2.51
PTX3-201ENST00000295927 ANKRD26Q9UPS8 1709 aa30.7■■■□□ 2.5
PTX3-201ENST00000295927 CPSF1Q10570 1443 aaKnown RBP30.69■■■□□ 2.5
PTX3-201ENST00000295927 CDC42BPGQ6DT37 1551 aa30.69■■■□□ 2.5
PTX3-201ENST00000295927 GTF3C3Q9Y5Q9 886 aa30.69■■■□□ 2.5
PTX3-201ENST00000295927 TOPAZ1Q8N9V7 1692 aa30.68■■■□□ 2.5
PTX3-201ENST00000295927 KIF20BQ96Q89 1820 aa30.68■■■□□ 2.5
PTX3-201ENST00000295927 KDM4FA0A1W2PPD8 638 aa30.68■■■□□ 2.5
PTX3-201ENST00000295927 ITSN1Q15811 1721 aa30.67■■■□□ 2.5
PTX3-201ENST00000295927 AKAP12Q02952 1782 aa30.66■■■□□ 2.5
PTX3-201ENST00000295927 FYB1O15117 783 aa30.65■■■□□ 2.5
PTX3-201ENST00000295927 TNNT2P45379 298 aaPredicted RBP30.65■■■□□ 2.5
PTX3-201ENST00000295927 MON2Q7Z3U7 1717 aa30.65■■■□□ 2.5
PTX3-201ENST00000295927 GGNBP2Q9H3C7 697 aa30.63■■■□□ 2.49
PTX3-201ENST00000295927 INSRP06213 1382 aa30.63■■■□□ 2.49
PTX3-201ENST00000295927 NUTM2FA1L443 756 aa30.62■■■□□ 2.49
PTX3-201ENST00000295927 EDC4Q6P2E9 1401 aaKnown RBP30.61■■■□□ 2.49
PTX3-201ENST00000295927 POLR3AO14802 1390 aaPredicted RBP30.59■■■□□ 2.49
PTX3-201ENST00000295927 BLMP54132 1417 aaPredicted RBP30.59■■■□□ 2.49
PTX3-201ENST00000295927 RGPD8O14715 1765 aaPredicted RBP30.59■■■□□ 2.49
PTX3-201ENST00000295927 WDR43Q15061 677 aaKnown RBP eCLIP30.59■■■□□ 2.49
PTX3-201ENST00000295927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.59■■■□□ 2.49
PTX3-201ENST00000295927 NALCNQ8IZF0 1738 aa30.58■■■□□ 2.49
PTX3-201ENST00000295927 ADAMTS8Q9UP79 889 aa30.58■■■□□ 2.49
PTX3-201ENST00000295927 PLEKHG3A1L390 1219 aa30.57■■■□□ 2.48
PTX3-201ENST00000295927 ZNF692Q9BU19 519 aaPredicted RBP30.57■■■□□ 2.48
PTX3-201ENST00000295927 FMN2Q9NZ56 1722 aa30.56■■■□□ 2.48
PTX3-201ENST00000295927 NWD1Q149M9 1564 aa30.56■■■□□ 2.48
PTX3-201ENST00000295927 SENP3-EIF4A1A0A087X0R7 540 aa30.55■■■□□ 2.48
PTX3-201ENST00000295927 NKTRP30414 1462 aaKnown RBP30.55■■■□□ 2.48
PTX3-201ENST00000295927 MTHFSP49914 203 aa30.54■■■□□ 2.48
PTX3-201ENST00000295927 ACEP12821 1306 aa30.54■■■□□ 2.48
PTX3-201ENST00000295927 HSPA2P54652 639 aa30.51■■■□□ 2.48
PTX3-201ENST00000295927 ANKARQ7Z5J8 1434 aa30.51■■■□□ 2.48
PTX3-201ENST00000295927 SHPRHQ149N8 1683 aa30.51■■■□□ 2.47
PTX3-201ENST00000295927 NRKQ7Z2Y5 1582 aa30.5■■■□□ 2.47
PTX3-201ENST00000295927 RBM33Q96EV2 1170 aaKnown RBP30.5■■■□□ 2.47
PTX3-201ENST00000295927 NME9Q86XW9 330 aa30.47■■■□□ 2.47
PTX3-201ENST00000295927 ADGRL3Q9HAR2 1447 aa30.47■■■□□ 2.47
PTX3-201ENST00000295927 LMTK3Q96Q04 1460 aa30.47■■■□□ 2.47
PTX3-201ENST00000295927 CFAP53Q96M91 514 aa30.47■■■□□ 2.47
PTX3-201ENST00000295927 USP6P35125 1406 aa30.46■■■□□ 2.47
PTX3-201ENST00000295927 PMFBP1Q8TBY8 1022 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms