RNA–Protein interactions for RNA: ENST00000295033.7

TRIM17-201, Transcript of tripartite motif containing 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM17, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17-201ENST00000295033 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
TRIM17-201ENST00000295033 YTHDC2Q9H6S0 1430 aaKnown RBP23.62■■□□□ 1.37
TRIM17-201ENST00000295033 PUS7Q96PZ0 661 aaKnown RBP23.62■■□□□ 1.37
TRIM17-201ENST00000295033 LRRC7Q96NW7 1537 aa23.61■■□□□ 1.37
TRIM17-201ENST00000295033 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.61■■□□□ 1.37
TRIM17-201ENST00000295033 NPC1L1Q9UHC9 1359 aa23.6■■□□□ 1.37
TRIM17-201ENST00000295033 NRXN3Q9Y4C0 1643 aa23.6■■□□□ 1.37
TRIM17-201ENST00000295033 BCANQ96GW7 911 aa23.6■■□□□ 1.37
TRIM17-201ENST00000295033 SLC26A8Q96RN1 970 aa23.59■■□□□ 1.37
TRIM17-201ENST00000295033 TULP4Q9NRJ4 1543 aa23.58■■□□□ 1.37
TRIM17-201ENST00000295033 AMER1Q5JTC6 1135 aaPredicted RBP23.58■■□□□ 1.37
TRIM17-201ENST00000295033 HNRNPUQ00839 825 aaKnown RBP eCLIP23.57■■□□□ 1.36
TRIM17-201ENST00000295033 CNGB1Q14028 1251 aaPredicted RBP23.57■■□□□ 1.36
TRIM17-201ENST00000295033 NLRP13Q86W25 1043 aa23.57■■□□□ 1.36
TRIM17-201ENST00000295033 DLC1Q96QB1 1528 aa23.57■■□□□ 1.36
TRIM17-201ENST00000295033 FAM9BQ8IZU0 186 aa23.56■■□□□ 1.36
TRIM17-201ENST00000295033 PNISRQ8TF01 805 aaKnown RBP23.56■■□□□ 1.36
TRIM17-201ENST00000295033 KNSTRNQ9Y448 316 aa23.56■■□□□ 1.36
TRIM17-201ENST00000295033 HSPA1LP34931 641 aa23.56■■□□□ 1.36
TRIM17-201ENST00000295033 HDGFP51858 240 aaKnown RBP23.54■■□□□ 1.36
TRIM17-201ENST00000295033 TMC1Q8TDI8 760 aa23.54■■□□□ 1.36
TRIM17-201ENST00000295033 LRPPRCP42704 1394 aaKnown RBP23.54■■□□□ 1.36
TRIM17-201ENST00000295033 CC2D1BQ5T0F9 858 aaKnown RBP23.53■■□□□ 1.36
TRIM17-201ENST00000295033 EVC2Q86UK5 1308 aa23.53■■□□□ 1.36
TRIM17-201ENST00000295033 STK26Q9P289 416 aa23.51■■□□□ 1.35
TRIM17-201ENST00000295033 ABCC11Q96J66 1382 aa23.5■■□□□ 1.35
TRIM17-201ENST00000295033 KCNA6P17658 529 aa23.5■■□□□ 1.35
TRIM17-201ENST00000295033 RBM33Q96EV2 1170 aaKnown RBP23.48■■□□□ 1.35
TRIM17-201ENST00000295033 CARD14Q9BXL6 1004 aa23.48■■□□□ 1.35
TRIM17-201ENST00000295033 ZBED9Q6R2W3 1325 aa23.48■■□□□ 1.35
TRIM17-201ENST00000295033 PRAM1Q96QH2 718 aa23.47■■□□□ 1.35
TRIM17-201ENST00000295033 PLEKHG1Q9ULL1 1385 aa23.46■■□□□ 1.35
TRIM17-201ENST00000295033 PROSER2Q86WR7 435 aaPredicted RBP23.46■■□□□ 1.35
TRIM17-201ENST00000295033 KNDC1Q76NI1 1749 aa23.46■■□□□ 1.35
TRIM17-201ENST00000295033 USP32Q8NFA0 1604 aa23.46■■□□□ 1.35
TRIM17-201ENST00000295033 TECPR2O15040 1411 aa23.46■■□□□ 1.35
TRIM17-201ENST00000295033 TMEM94Q12767 1356 aa23.45■■□□□ 1.35
TRIM17-201ENST00000295033 NINLQ9Y2I6 1382 aa23.45■■□□□ 1.35
TRIM17-201ENST00000295033 ILDR2Q71H61 639 aa23.45■■□□□ 1.34
TRIM17-201ENST00000295033 METP08581 1390 aa23.45■■□□□ 1.34
TRIM17-201ENST00000295033 INSRP06213 1382 aa23.44■■□□□ 1.34
TRIM17-201ENST00000295033 SLC12A5Q9H2X9 1139 aa23.44■■□□□ 1.34
TRIM17-201ENST00000295033 XIRP1Q702N8 1843 aaKnown RBP23.43■■□□□ 1.34
TRIM17-201ENST00000295033 ADAMTS13Q76LX8 1427 aa23.43■■□□□ 1.34
TRIM17-201ENST00000295033 POGKQ9P215 609 aa23.43■■□□□ 1.34
TRIM17-201ENST00000295033 SIRT1Q96EB6 747 aa23.42■■□□□ 1.34
TRIM17-201ENST00000295033 PPP2R1AP30153 589 aa23.41■■□□□ 1.34
TRIM17-201ENST00000295033 SAFB2Q14151 953 aaKnown RBP eCLIP23.41■■□□□ 1.34
TRIM17-201ENST00000295033 ATAD2Q6PL18 1390 aa23.41■■□□□ 1.34
TRIM17-201ENST00000295033 ANKRD36BQ8N2N9 1353 aa23.41■■□□□ 1.34
TRIM17-201ENST00000295033 FAM135BQ49AJ0 1406 aa23.4■■□□□ 1.34
TRIM17-201ENST00000295033 NSD3Q9BZ95 1437 aa23.4■■□□□ 1.34
TRIM17-201ENST00000295033 CABP2Q9NPB3 220 aa23.39■■□□□ 1.33
TRIM17-201ENST00000295033 MINK1Q8N4C8 1332 aaPredicted RBP23.39■■□□□ 1.33
TRIM17-201ENST00000295033 TBX22Q9Y458 520 aa23.38■■□□□ 1.33
TRIM17-201ENST00000295033 NWD1Q149M9 1564 aa23.37■■□□□ 1.33
TRIM17-201ENST00000295033 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
TRIM17-201ENST00000295033 PLEKHH1Q9ULM0 1364 aa23.36■■□□□ 1.33
TRIM17-201ENST00000295033 SRPK2P78362 688 aaKnown RBP23.34■■□□□ 1.33
TRIM17-201ENST00000295033 WAPLQ7Z5K2 1190 aa23.33■■□□□ 1.33
TRIM17-201ENST00000295033 BLMP54132 1417 aaPredicted RBP23.33■■□□□ 1.32
TRIM17-201ENST00000295033 CD163L1Q9NR16 1453 aa23.32■■□□□ 1.32
TRIM17-201ENST00000295033 CHD2O14647 1828 aaKnown RBP23.32■■□□□ 1.32
TRIM17-201ENST00000295033 CDK19Q9BWU1 502 aa23.32■■□□□ 1.32
TRIM17-201ENST00000295033 NSD2O96028 1365 aa23.32■■□□□ 1.32
TRIM17-201ENST00000295033 MSH6P52701 1360 aa23.31■■□□□ 1.32
TRIM17-201ENST00000295033 DIP2AQ14689 1571 aa23.31■■□□□ 1.32
TRIM17-201ENST00000295033 A0A1W2PP64 1363 aa23.3■■□□□ 1.32
TRIM17-201ENST00000295033 CGNL1Q0VF96 1302 aa23.3■■□□□ 1.32
TRIM17-201ENST00000295033 MED1Q15648 1581 aaPredicted RBP23.3■■□□□ 1.32
TRIM17-201ENST00000295033 C14orf37Q86TY3 774 aa23.29■■□□□ 1.32
TRIM17-201ENST00000295033 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.32
TRIM17-201ENST00000295033 TERF2IPQ9NYB0 399 aa23.26■■□□□ 1.31
TRIM17-201ENST00000295033 AMOTL2Q9Y2J4 779 aa23.26■■□□□ 1.31
TRIM17-201ENST00000295033 ADGRB2O60241 1585 aa23.26■■□□□ 1.31
TRIM17-201ENST00000295033 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
TRIM17-201ENST00000295033 PTPRUQ92729 1446 aa23.25■■□□□ 1.31
TRIM17-201ENST00000295033 ATP7BP35670 1465 aa23.25■■□□□ 1.31
TRIM17-201ENST00000295033 WASLO00401 505 aaPredicted RBP23.25■■□□□ 1.31
TRIM17-201ENST00000295033 SMG6Q86US8 1419 aaKnown RBP23.24■■□□□ 1.31
TRIM17-201ENST00000295033 SLAIN2Q9P270 581 aa23.24■■□□□ 1.31
TRIM17-201ENST00000295033 POLR3AO14802 1390 aaPredicted RBP23.23■■□□□ 1.31
TRIM17-201ENST00000295033 ROBO1Q9Y6N7 1651 aa23.23■■□□□ 1.31
TRIM17-201ENST00000295033 SOCS7O14512 581 aa23.22■■□□□ 1.31
TRIM17-201ENST00000295033 MORC1Q86VD1 984 aa23.22■■□□□ 1.31
TRIM17-201ENST00000295033 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
TRIM17-201ENST00000295033 SUPT16HQ9Y5B9 1047 aaKnown RBP23.22■■□□□ 1.31
TRIM17-201ENST00000295033 PTCH1Q13635 1447 aa23.21■■□□□ 1.31
TRIM17-201ENST00000295033 ANKRD26Q9UPS8 1709 aa23.21■■□□□ 1.31
TRIM17-201ENST00000295033 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.2■■□□□ 1.3
TRIM17-201ENST00000295033 CABP1Q9NZU7 370 aa23.2■■□□□ 1.3
TRIM17-201ENST00000295033 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
TRIM17-201ENST00000295033 HDGFL2Q7Z4V5 671 aaPredicted RBP23.19■■□□□ 1.3
TRIM17-201ENST00000295033 NCOA3Q9Y6Q9 1424 aa23.19■■□□□ 1.3
TRIM17-201ENST00000295033 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
TRIM17-201ENST00000295033 CPSF1Q10570 1443 aaKnown RBP23.18■■□□□ 1.3
TRIM17-201ENST00000295033 C19orf44Q9H6X5 657 aa23.18■■□□□ 1.3
TRIM17-201ENST00000295033 WDR43Q15061 677 aaKnown RBP eCLIP23.17■■□□□ 1.3
TRIM17-201ENST00000295033 ATF3P18847 181 aa23.16■■□□□ 1.3
TRIM17-201ENST00000295033 NUDCQ9Y266 331 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms