RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 SPDYE16A6NNV3 312 aaPredicted RBP8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 PATL2C9JE40 543 aaKnown RBP8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 C1QBPQ07021 282 aaKnown RBP8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 CFAP70Q5T0N1 1121 aa8.42□□□□□ -1.06
CDKAL1-201ENST00000274695 TXNDC2Q86VQ3 553 aa8.41□□□□□ -1.06
CDKAL1-201ENST00000274695 RBM19Q9Y4C8 960 aaKnown RBP8.41□□□□□ -1.06
CDKAL1-201ENST00000274695 DHX29Q7Z478 1369 aaKnown RBP8.41□□□□□ -1.06
CDKAL1-201ENST00000274695 RFC5P40937 340 aa8.41□□□□□ -1.06
CDKAL1-201ENST00000274695 USTQ9Y2C2 406 aa8.41□□□□□ -1.06
CDKAL1-201ENST00000274695 SPDYE1Q8NFV5 336 aaPredicted RBP8.4□□□□□ -1.06
CDKAL1-201ENST00000274695 RBM47A0AV96 593 aaKnown RBP8.4□□□□□ -1.07
CDKAL1-201ENST00000274695 DSG2Q14126 1118 aa8.4□□□□□ -1.07
CDKAL1-201ENST00000274695 BEGAINQ9BUH8 593 aa8.4□□□□□ -1.07
CDKAL1-201ENST00000274695 KTN1Q86UP2 1357 aaKnown RBP8.4□□□□□ -1.07
CDKAL1-201ENST00000274695 ABCC10Q5T3U5 1492 aa8.4□□□□□ -1.07
CDKAL1-201ENST00000274695 ZBED9Q6R2W3 1325 aa8.4□□□□□ -1.07
CDKAL1-201ENST00000274695 CCDC61Q9Y6R9 512 aa8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 CCDC7Q96M83 1385 aa8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 NUP153P49790 1475 aaKnown RBP8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 ABCA8O94911 1581 aa8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 ABL2P42684 1182 aa8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 MYSM1Q5VVJ2 828 aa8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 GPHNQ9NQX3 736 aaPredicted RBP8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 EIF4G3O43432 1585 aaKnown RBP8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 WASHC2AQ641Q2 1341 aa8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 MAGI2Q86UL8 1455 aa8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 SMARCA5O60264 1052 aaPredicted RBP8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 MDM2Q00987 491 aaPredicted RBP8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 MRRFQ96E11 262 aaKnown RBP8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 POLR3GLQ9BT43 218 aa8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 CWC22Q9HCG8 908 aaKnown RBP8.39□□□□□ -1.07
CDKAL1-201ENST00000274695 CLASP1Q7Z460 1538 aa8.38□□□□□ -1.07
CDKAL1-201ENST00000274695 ABCC5O15440 1437 aa8.38□□□□□ -1.07
CDKAL1-201ENST00000274695 NOM1Q5C9Z4 860 aaKnown RBP8.38□□□□□ -1.07
CDKAL1-201ENST00000274695 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
CDKAL1-201ENST00000274695 PLXNC1O60486 1568 aa8.38□□□□□ -1.07
CDKAL1-201ENST00000274695 MYO5CQ9NQX4 1742 aa8.38□□□□□ -1.07
CDKAL1-201ENST00000274695 KIAA0586Q9BVV6 1533 aa8.38□□□□□ -1.07
CDKAL1-201ENST00000274695 LRPPRCP42704 1394 aaKnown RBP8.38□□□□□ -1.07
CDKAL1-201ENST00000274695 TONSLQ96HA7 1378 aa8.38□□□□□ -1.07
CDKAL1-201ENST00000274695 FCHSD2O94868 740 aa8.37□□□□□ -1.07
CDKAL1-201ENST00000274695 SSTR3P32745 418 aaPredicted RBP8.37□□□□□ -1.07
CDKAL1-201ENST00000274695 NLRP7Q8WX94 980 aa8.37□□□□□ -1.07
CDKAL1-201ENST00000274695 TMEM88BA6NKF7 163 aa8.37□□□□□ -1.07
CDKAL1-201ENST00000274695 PDE4CQ08493 712 aa8.36□□□□□ -1.07
CDKAL1-201ENST00000274695 PTGDRQ13258 359 aa8.36□□□□□ -1.07
CDKAL1-201ENST00000274695 SIN3AQ96ST3 1273 aa8.36□□□□□ -1.07
CDKAL1-201ENST00000274695 PREX2Q70Z35 1606 aa8.36□□□□□ -1.07
CDKAL1-201ENST00000274695 PDS5BQ9NTI5 1447 aa8.36□□□□□ -1.07
CDKAL1-201ENST00000274695 IQGAP3Q86VI3 1631 aa8.36□□□□□ -1.07
CDKAL1-201ENST00000274695 CSB-PGBD3P0DP91 1061 aa8.35□□□□□ -1.07
CDKAL1-201ENST00000274695 PRDM15P57071 1507 aaPredicted RBP8.35□□□□□ -1.07
CDKAL1-201ENST00000274695 ANP32CO43423 234 aa8.35□□□□□ -1.07
CDKAL1-201ENST00000274695 ATP10AO60312 1499 aa8.35□□□□□ -1.07
CDKAL1-201ENST00000274695 KIAA1210Q9ULL0 1709 aa8.35□□□□□ -1.07
CDKAL1-201ENST00000274695 CDK13Q14004 1512 aaKnown RBP8.35□□□□□ -1.07
CDKAL1-201ENST00000274695 EIF2AK4Q9P2K8 1649 aaKnown RBP8.35□□□□□ -1.07
CDKAL1-201ENST00000274695 MTUS2Q5JR59 1369 aa8.34□□□□□ -1.07
CDKAL1-201ENST00000274695 SYNJ2O15056 1496 aa8.34□□□□□ -1.07
CDKAL1-201ENST00000274695 IQGAP1P46940 1657 aa8.34□□□□□ -1.07
CDKAL1-201ENST00000274695 CAMSAP2Q08AD1 1489 aa8.34□□□□□ -1.07
CDKAL1-201ENST00000274695 IFT140Q96RY7 1462 aa8.34□□□□□ -1.07
CDKAL1-201ENST00000274695 ZNF608Q9ULD9 1512 aaPredicted RBP8.34□□□□□ -1.07
CDKAL1-201ENST00000274695 MRC2Q9UBG0 1479 aa8.34□□□□□ -1.08
CDKAL1-201ENST00000274695 BANK1Q8NDB2 785 aa8.34□□□□□ -1.08
CDKAL1-201ENST00000274695 GPCPD1Q9NPB8 672 aa8.34□□□□□ -1.08
CDKAL1-201ENST00000274695 HDGFL1Q5TGJ6 251 aa8.33□□□□□ -1.08
CDKAL1-201ENST00000274695 DDX12PQ92771 950 aa8.33□□□□□ -1.08
CDKAL1-201ENST00000274695 BCL11AQ9H165 835 aa8.33□□□□□ -1.08
CDKAL1-201ENST00000274695 SHROOM2Q13796 1616 aa8.32□□□□□ -1.08
CDKAL1-201ENST00000274695 VRTNQ9H8Y1 702 aa8.32□□□□□ -1.08
CDKAL1-201ENST00000274695 CDC42BPBQ9Y5S2 1711 aa8.32□□□□□ -1.08
CDKAL1-201ENST00000274695 CLK2P49760 499 aaKnown RBP8.32□□□□□ -1.08
CDKAL1-201ENST00000274695 DDX10Q13206 875 aaKnown RBP8.32□□□□□ -1.08
CDKAL1-201ENST00000274695 DNAJC14Q6Y2X3 702 aaPredicted RBP8.32□□□□□ -1.08
CDKAL1-201ENST00000274695 KIAA1107Q9UPP5 1409 aa8.32□□□□□ -1.08
CDKAL1-201ENST00000274695 ROCK2O75116 1388 aaKnown RBP8.32□□□□□ -1.08
CDKAL1-201ENST00000274695 LIMD1Q9UGP4 676 aa8.32□□□□□ -1.08
CDKAL1-201ENST00000274695 MAGI1Q96QZ7 1491 aaPredicted RBP8.32□□□□□ -1.08
CDKAL1-201ENST00000274695 FARP1Q9Y4F1 1045 aaPredicted RBP8.31□□□□□ -1.08
CDKAL1-201ENST00000274695 PLEKHH2Q8IVE3 1493 aa8.31□□□□□ -1.08
CDKAL1-201ENST00000274695 CLCN1P35523 988 aa8.31□□□□□ -1.08
CDKAL1-201ENST00000274695 CDCA8Q53HL2 280 aa8.31□□□□□ -1.08
CDKAL1-201ENST00000274695 GPRASP1Q5JY77 1395 aa8.31□□□□□ -1.08
CDKAL1-201ENST00000274695 GPATCH8Q9UKJ3 1502 aaKnown RBP8.31□□□□□ -1.08
CDKAL1-201ENST00000274695 DEPDC5O75140 1603 aa8.31□□□□□ -1.08
CDKAL1-201ENST00000274695 TROQ12816 1431 aaPredicted RBP8.3□□□□□ -1.08
CDKAL1-201ENST00000274695 PPP4R2Q9NY27 417 aa8.3□□□□□ -1.08
CDKAL1-201ENST00000274695 NUP160Q12769 1436 aa8.3□□□□□ -1.08
CDKAL1-201ENST00000274695 PRKRIP1Q9H875 184 aaPredicted RBP8.3□□□□□ -1.08
CDKAL1-201ENST00000274695 MAP3K13O43283 966 aa8.3□□□□□ -1.08
CDKAL1-201ENST00000274695 GRIN2AQ12879 1464 aa8.3□□□□□ -1.08
CDKAL1-201ENST00000274695 ZNF16P17020 682 aaPredicted RBP8.29□□□□□ -1.08
CDKAL1-201ENST00000274695 FAM217BQ9NTX9 383 aaPredicted RBP8.29□□□□□ -1.08
CDKAL1-201ENST00000274695 MYOM1P52179 1685 aa8.29□□□□□ -1.08
CDKAL1-201ENST00000274695 FAM161AQ3B820 660 aa8.29□□□□□ -1.08
CDKAL1-201ENST00000274695 CEP152O94986 1710 aa8.29□□□□□ -1.08
CDKAL1-201ENST00000274695 SPHKAPQ2M3C7 1700 aa8.29□□□□□ -1.08
CDKAL1-201ENST00000274695 MYO3AQ8NEV4 1616 aa8.29□□□□□ -1.08
CDKAL1-201ENST00000274695 BLMP54132 1417 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms