RNA–Protein interactions for RNA: ENST00000265662.9

ABCA2-201, Transcript of ATP binding cassette subfamily A member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ABCA2, Length 8,154 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-201ENST00000265662 RUFY2Q8WXA3 655 aa16.61■□□□□ 0.25
ABCA2-201ENST00000265662 NAP1L1P55209 391 aaKnown RBP16.61■□□□□ 0.25
ABCA2-201ENST00000265662 GPATCH11Q8N954 259 aa16.61■□□□□ 0.25
ABCA2-201ENST00000265662 NECTIN2Q92692 538 aa16.61■□□□□ 0.25
ABCA2-201ENST00000265662 NUTM2DQ5VT03 806 aaPredicted RBP16.61■□□□□ 0.25
ABCA2-201ENST00000265662 CCDC191Q8NCU4 936 aa16.6■□□□□ 0.25
ABCA2-201ENST00000265662 CLCN1P35523 988 aa16.6■□□□□ 0.25
ABCA2-201ENST00000265662 TRAK1Q9UPV9 953 aa16.6■□□□□ 0.25
ABCA2-201ENST00000265662 RBM25P49756 843 aaKnown RBP16.6■□□□□ 0.25
ABCA2-201ENST00000265662 RIPK4P57078 832 aa16.6■□□□□ 0.25
ABCA2-201ENST00000265662 C1orf115Q9H7X2 142 aa16.59■□□□□ 0.25
ABCA2-201ENST00000265662 CEBPZQ03701 1054 aaKnown RBP16.59■□□□□ 0.25
ABCA2-201ENST00000265662 PLCD3Q8N3E9 789 aa16.59■□□□□ 0.25
ABCA2-201ENST00000265662 TERF2IPQ9NYB0 399 aa16.59■□□□□ 0.25
ABCA2-201ENST00000265662 CCDC192P0DO97 292 aa16.59■□□□□ 0.25
ABCA2-201ENST00000265662 RABEP1Q15276 862 aa16.59■□□□□ 0.25
ABCA2-201ENST00000265662 ANKRD20A12PQ8NF67 263 aa16.58■□□□□ 0.25
ABCA2-201ENST00000265662 CCDC144AA2RUR9 1427 aa16.58■□□□□ 0.25
ABCA2-201ENST00000265662 HOOK1Q9UJC3 728 aaKnown RBP16.58■□□□□ 0.24
ABCA2-201ENST00000265662 RUNDC1Q96C34 613 aa16.58■□□□□ 0.24
ABCA2-201ENST00000265662 ERCC4Q92889 916 aaPredicted RBP16.57■□□□□ 0.24
ABCA2-201ENST00000265662 PANK2Q9BZ23 570 aa16.57■□□□□ 0.24
ABCA2-201ENST00000265662 DYNC1I1O14576 645 aa16.57■□□□□ 0.24
ABCA2-201ENST00000265662 CALCOCO1Q9P1Z2 691 aa16.57■□□□□ 0.24
ABCA2-201ENST00000265662 CT47B1P0C2W7 299 aaPredicted RBP16.56■□□□□ 0.24
ABCA2-201ENST00000265662 HNRNPMP52272 730 aaKnown RBP eCLIP16.56■□□□□ 0.24
ABCA2-201ENST00000265662 CENPHQ9H3R5 247 aa16.56■□□□□ 0.24
ABCA2-201ENST00000265662 CPLX1O14810 134 aa16.56■□□□□ 0.24
ABCA2-201ENST00000265662 KINO60870 393 aaKnown RBP16.56■□□□□ 0.24
ABCA2-201ENST00000265662 CDR1P51861 262 aa16.55■□□□□ 0.24
ABCA2-201ENST00000265662 KIAA0754O94854 1291 aa16.55■□□□□ 0.24
ABCA2-201ENST00000265662 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.55■□□□□ 0.24
ABCA2-201ENST00000265662 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
ABCA2-201ENST00000265662 TRIM29Q14134 588 aa16.55■□□□□ 0.24
ABCA2-201ENST00000265662 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
ABCA2-201ENST00000265662 PNISRQ8TF01 805 aaKnown RBP16.55■□□□□ 0.24
ABCA2-201ENST00000265662 RNF20Q5VTR2 975 aa16.54■□□□□ 0.24
ABCA2-201ENST00000265662 ZFP91Q96JP5 570 aaPredicted RBP16.54■□□□□ 0.24
ABCA2-201ENST00000265662 POLR3GO15318 223 aaPredicted RBP16.54■□□□□ 0.24
ABCA2-201ENST00000265662 AAMPQ13685 434 aa16.54■□□□□ 0.24
ABCA2-201ENST00000265662 GGT6Q6P531 493 aa16.54■□□□□ 0.24
ABCA2-201ENST00000265662 TNMDQ9H2S6 317 aa16.54■□□□□ 0.24
ABCA2-201ENST00000265662 HDAC5Q9UQL6 1122 aa16.53■□□□□ 0.24
ABCA2-201ENST00000265662 FAM193AP78312 1265 aa16.53■□□□□ 0.24
ABCA2-201ENST00000265662 AKAP17AQ02040 695 aaKnown RBP16.53■□□□□ 0.24
ABCA2-201ENST00000265662 SYNE3Q6ZMZ3 975 aa16.53■□□□□ 0.24
ABCA2-201ENST00000265662 IBSPP21815 317 aaPredicted RBP16.53■□□□□ 0.24
ABCA2-201ENST00000265662 ROCK1Q13464 1354 aa16.53■□□□□ 0.24
ABCA2-201ENST00000265662 IFIT2P09913 472 aaKnown RBP16.52■□□□□ 0.24
ABCA2-201ENST00000265662 XRCC6P12956 609 aaKnown RBP eCLIP16.52■□□□□ 0.24
ABCA2-201ENST00000265662 DCTN1Q14203 1278 aa16.52■□□□□ 0.24
ABCA2-201ENST00000265662 IPO4Q8TEX9 1081 aaKnown RBP16.52■□□□□ 0.24
ABCA2-201ENST00000265662 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
ABCA2-201ENST00000265662 BRPF1P55201 1214 aaPredicted RBP16.52■□□□□ 0.23
ABCA2-201ENST00000265662 FILIP1Q7Z7B0 1213 aa16.52■□□□□ 0.23
ABCA2-201ENST00000265662 NACADO15069 1562 aa16.51■□□□□ 0.23
ABCA2-201ENST00000265662 LTV1Q96GA3 475 aaPredicted RBP16.51■□□□□ 0.23
ABCA2-201ENST00000265662 TBC1D2Q9BYX2 928 aa16.51■□□□□ 0.23
ABCA2-201ENST00000265662 CCP110O43303 1012 aa16.51■□□□□ 0.23
ABCA2-201ENST00000265662 C20orf194Q5TEA3 1177 aa16.51■□□□□ 0.23
ABCA2-201ENST00000265662 TIGD1Q96MW7 591 aa16.51■□□□□ 0.23
ABCA2-201ENST00000265662 PDE3AQ14432 1141 aa16.51■□□□□ 0.23
ABCA2-201ENST00000265662 WWC1Q8IX03 1113 aa16.5■□□□□ 0.23
ABCA2-201ENST00000265662 CCDC102AQ96A19 550 aa16.5■□□□□ 0.23
ABCA2-201ENST00000265662 C16orf45Q96MC5 204 aaPredicted RBP16.5■□□□□ 0.23
ABCA2-201ENST00000265662 GTF2F1P35269 517 aaKnown RBP eCLIP16.5■□□□□ 0.231e-9■■■■■ 37.2
ABCA2-201ENST00000265662 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
ABCA2-201ENST00000265662 MCM2P49736 904 aa16.5■□□□□ 0.23
ABCA2-201ENST00000265662 CIZ1Q9ULV3 898 aaPredicted RBP16.5■□□□□ 0.23
ABCA2-201ENST00000265662 KDM4AO75164 1064 aa16.5■□□□□ 0.23
ABCA2-201ENST00000265662 C9orf78Q9NZ63 289 aaPredicted RBP16.5■□□□□ 0.23
ABCA2-201ENST00000265662 EIF3JO75822 258 aaKnown RBP16.49■□□□□ 0.23
ABCA2-201ENST00000265662 MARCH6O60337 910 aa16.49■□□□□ 0.23
ABCA2-201ENST00000265662 API5Q9BZZ5 524 aaKnown RBP16.49■□□□□ 0.23
ABCA2-201ENST00000265662 TNPO1Q92973 898 aaKnown RBP16.49■□□□□ 0.23
ABCA2-201ENST00000265662 CHMP4CQ96CF2 233 aa16.49■□□□□ 0.23
ABCA2-201ENST00000265662 IRX3P78415 501 aaPredicted RBP16.49■□□□□ 0.23
ABCA2-201ENST00000265662 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
ABCA2-201ENST00000265662 CPLX2Q6PUV4 134 aaKnown RBP16.48■□□□□ 0.23
ABCA2-201ENST00000265662 NGEFQ8N5V2 710 aa16.48■□□□□ 0.23
ABCA2-201ENST00000265662 KAT6BQ8WYB5 2073 aa16.48■□□□□ 0.23
ABCA2-201ENST00000265662 SERPINC1P01008 464 aa16.48■□□□□ 0.23
ABCA2-201ENST00000265662 USP8P40818 1118 aa16.48■□□□□ 0.23
ABCA2-201ENST00000265662 VPS53Q5VIR6 699 aa16.48■□□□□ 0.23
ABCA2-201ENST00000265662 NOB1Q9ULX3 412 aaKnown RBP16.48■□□□□ 0.23
ABCA2-201ENST00000265662 KIF21BO75037 1637 aa16.48■□□□□ 0.23
ABCA2-201ENST00000265662 TNNT1P13805 278 aa16.47■□□□□ 0.23
ABCA2-201ENST00000265662 UBXN4Q92575 508 aa16.47■□□□□ 0.23
ABCA2-201ENST00000265662 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
ABCA2-201ENST00000265662 GIMAP7Q8NHV1 300 aa16.47■□□□□ 0.23
ABCA2-201ENST00000265662 WDR33Q9C0J8 1336 aaKnown RBP16.47■□□□□ 0.23
ABCA2-201ENST00000265662 TMCO3Q6UWJ1 677 aa16.47■□□□□ 0.23
ABCA2-201ENST00000265662 IGSF3O75054 1194 aa16.47■□□□□ 0.23
ABCA2-201ENST00000265662 FKBP5Q13451 457 aaPredicted RBP16.47■□□□□ 0.23
ABCA2-201ENST00000265662 CAMK4Q16566 473 aa16.47■□□□□ 0.23
ABCA2-201ENST00000265662 PRM3Q9NNZ6 103 aa16.47■□□□□ 0.23
ABCA2-201ENST00000265662 DNAJC2Q99543 621 aaKnown RBP16.46■□□□□ 0.23
ABCA2-201ENST00000265662 RRAGDQ9NQL2 400 aaPredicted RBP16.46■□□□□ 0.23
ABCA2-201ENST00000265662 PTPN14Q15678 1187 aa16.46■□□□□ 0.23
ABCA2-201ENST00000265662 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms