RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 USP47Q96K76 1375 aa17.89■□□□□ 0.45
AFF4-201ENST00000265343 CCDC146Q8IYE0 955 aa17.88■□□□□ 0.45
AFF4-201ENST00000265343 MAP9Q49MG5 647 aa17.88■□□□□ 0.45
AFF4-201ENST00000265343 GBP3Q9H0R5 595 aa17.88■□□□□ 0.45
AFF4-201ENST00000265343 CDC45O75419 566 aa17.88■□□□□ 0.45
AFF4-201ENST00000265343 SLC26A8Q96RN1 970 aa17.88■□□□□ 0.45
AFF4-201ENST00000265343 JMYQ8N9B5 988 aa17.88■□□□□ 0.45
AFF4-201ENST00000265343 CCDC144AA2RUR9 1427 aa17.88■□□□□ 0.45
AFF4-201ENST00000265343 NOL10Q9BSC4 688 aaKnown RBP17.88■□□□□ 0.45
AFF4-201ENST00000265343 API5Q9BZZ5 524 aaKnown RBP17.88■□□□□ 0.45
AFF4-201ENST00000265343 ESPNB1AK53 854 aa17.88■□□□□ 0.45
AFF4-201ENST00000265343 DHX16O60231 1041 aaKnown RBP17.88■□□□□ 0.45
AFF4-201ENST00000265343 DACH1Q9UI36 760 aa17.87■□□□□ 0.45
AFF4-201ENST00000265343 SMC2O95347 1197 aa17.87■□□□□ 0.45
AFF4-201ENST00000265343 ZNF396Q96N95 335 aaPredicted RBP17.87■□□□□ 0.45
AFF4-201ENST00000265343 CARMIL1Q5VZK9 1371 aa17.87■□□□□ 0.45
AFF4-201ENST00000265343 GRPEL1Q9HAV7 217 aa17.87■□□□□ 0.45
AFF4-201ENST00000265343 CBFA2T2O43439 604 aa17.87■□□□□ 0.45
AFF4-201ENST00000265343 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
AFF4-201ENST00000265343 GOLGA6L10A0A0M3HER8 536 aa17.86■□□□□ 0.45
AFF4-201ENST00000265343 IFIT2P09913 472 aaKnown RBP17.86■□□□□ 0.45
AFF4-201ENST00000265343 FRAT2O75474 233 aaPredicted RBP17.86■□□□□ 0.45
AFF4-201ENST00000265343 MAGEC2Q9UBF1 373 aaPredicted RBP17.86■□□□□ 0.45
AFF4-201ENST00000265343 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
AFF4-201ENST00000265343 CCDC43Q96MW1 224 aaKnown RBP17.86■□□□□ 0.45
AFF4-201ENST00000265343 ENOX2Q16206 610 aaKnown RBP17.86■□□□□ 0.45
AFF4-201ENST00000265343 TXLNAP40222 546 aa17.85■□□□□ 0.45
AFF4-201ENST00000265343 HIP1O00291 1037 aa17.85■□□□□ 0.45
AFF4-201ENST00000265343 SHTN1A0MZ66 631 aa17.84■□□□□ 0.45
AFF4-201ENST00000265343 CLASRPQ8N2M8 674 aaKnown RBP17.84■□□□□ 0.45
AFF4-201ENST00000265343 CIZ1Q9ULV3 898 aaPredicted RBP17.84■□□□□ 0.45
AFF4-201ENST00000265343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.84■□□□□ 0.45
AFF4-201ENST00000265343 CARMIL2Q6F5E8 1435 aa17.84■□□□□ 0.45
AFF4-201ENST00000265343 CUX2O14529 1486 aa17.84■□□□□ 0.45
AFF4-201ENST00000265343 GBP2P32456 591 aaPredicted RBP17.84■□□□□ 0.45
AFF4-201ENST00000265343 C9orf78Q9NZ63 289 aaPredicted RBP17.83■□□□□ 0.45
AFF4-201ENST00000265343 SOX12O15370 315 aa17.83■□□□□ 0.45
AFF4-201ENST00000265343 RSPH4AQ5TD94 716 aa17.83■□□□□ 0.45
AFF4-201ENST00000265343 ZSCAN30Q86W11 494 aa17.83■□□□□ 0.45
AFF4-201ENST00000265343 UBE2Q2Q8WVN8 375 aa17.83■□□□□ 0.45
AFF4-201ENST00000265343 MICALCLQ6ZW33 695 aa17.83■□□□□ 0.44
AFF4-201ENST00000265343 RBM10P98175 930 aaKnown RBP17.83■□□□□ 0.44
AFF4-201ENST00000265343 G3V3G9 751 aa17.82■□□□□ 0.44
AFF4-201ENST00000265343 DCAF8Q5TAQ9 597 aa17.82■□□□□ 0.44
AFF4-201ENST00000265343 LUZP1Q86V48 1076 aa17.82■□□□□ 0.44
AFF4-201ENST00000265343 RALYLQ86SE5 291 aaKnown RBP17.82■□□□□ 0.44
AFF4-201ENST00000265343 CNTLNQ9NXG0 1405 aa17.82■□□□□ 0.44
AFF4-201ENST00000265343 NFXL1Q6ZNB6 911 aa17.82■□□□□ 0.44
AFF4-201ENST00000265343 STIM1Q13586 685 aa17.81■□□□□ 0.44
AFF4-201ENST00000265343 COG6Q9Y2V7 657 aa17.81■□□□□ 0.44
AFF4-201ENST00000265343 POLR3GO15318 223 aaPredicted RBP17.81■□□□□ 0.44
AFF4-201ENST00000265343 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
AFF4-201ENST00000265343 CCDC181Q5TID7 509 aa17.81■□□□□ 0.44
AFF4-201ENST00000265343 PPFIBP1Q86W92 1011 aa17.81■□□□□ 0.44
AFF4-201ENST00000265343 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
AFF4-201ENST00000265343 CGNQ9P2M7 1197 aaKnown RBP17.8■□□□□ 0.44
AFF4-201ENST00000265343 ANKRD1Q15327 319 aa17.8■□□□□ 0.44
AFF4-201ENST00000265343 PLIN1O60240 522 aa17.8■□□□□ 0.44
AFF4-201ENST00000265343 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
AFF4-201ENST00000265343 SPATA24Q86W54 205 aa17.79■□□□□ 0.44
AFF4-201ENST00000265343 RBM33Q96EV2 1170 aaKnown RBP17.79■□□□□ 0.44
AFF4-201ENST00000265343 WDR33Q9C0J8 1336 aaKnown RBP17.79■□□□□ 0.44
AFF4-201ENST00000265343 RNF214Q8ND24 703 aa17.79■□□□□ 0.44
AFF4-201ENST00000265343 ZNF330Q9Y3S2 320 aaPredicted RBP17.78■□□□□ 0.44
AFF4-201ENST00000265343 CNTROBQ8N137 903 aa17.78■□□□□ 0.44
AFF4-201ENST00000265343 DDX58O95786 925 aaKnown RBP17.78■□□□□ 0.44
AFF4-201ENST00000265343 MCM5P33992 734 aa17.78■□□□□ 0.44
AFF4-201ENST00000265343 SYCP1Q15431 976 aa17.78■□□□□ 0.44
AFF4-201ENST00000265343 L3MBTL2Q969R5 705 aa17.78■□□□□ 0.44
AFF4-201ENST00000265343 SAFB2Q14151 953 aaKnown RBP eCLIP17.78■□□□□ 0.44
AFF4-201ENST00000265343 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
AFF4-201ENST00000265343 DHX57Q6P158 1386 aaKnown RBP17.78■□□□□ 0.44
AFF4-201ENST00000265343 TRIM34Q9BYJ4 488 aa17.77■□□□□ 0.44
AFF4-201ENST00000265343 TMCO3Q6UWJ1 677 aa17.77■□□□□ 0.44
AFF4-201ENST00000265343 SART3Q15020 963 aaKnown RBP17.77■□□□□ 0.44
AFF4-201ENST00000265343 CRACR2AQ9BSW2 395 aa17.77■□□□□ 0.43
AFF4-201ENST00000265343 SCAPERQ9BY12 1400 aa17.77■□□□□ 0.43
AFF4-201ENST00000265343 CCDC91Q7Z6B0 441 aa17.76■□□□□ 0.43
AFF4-201ENST00000265343 PAK3O75914 559 aaPredicted RBP17.76■□□□□ 0.43
AFF4-201ENST00000265343 UBXN4Q92575 508 aa17.76■□□□□ 0.43
AFF4-201ENST00000265343 SOGA1O94964 1423 aa17.76■□□□□ 0.43
AFF4-201ENST00000265343 TNMDQ9H2S6 317 aa17.76■□□□□ 0.43
AFF4-201ENST00000265343 G3BP1Q13283 466 aaKnown RBP eCLIP17.75■□□□□ 0.43
AFF4-201ENST00000265343 CSB-PGBD3P0DP91 1061 aa17.75■□□□□ 0.43
AFF4-201ENST00000265343 TTLL5Q6EMB2 1281 aa17.75■□□□□ 0.43
AFF4-201ENST00000265343 AMPHP49418 695 aa17.75■□□□□ 0.43
AFF4-201ENST00000265343 EVC2Q86UK5 1308 aa17.75■□□□□ 0.43
AFF4-201ENST00000265343 DNAJC2Q99543 621 aaKnown RBP17.75■□□□□ 0.43
AFF4-201ENST00000265343 SERPINC1P01008 464 aa17.75■□□□□ 0.43
AFF4-201ENST00000265343 ZFYVE27Q5T4F4 411 aa17.74■□□□□ 0.43
AFF4-201ENST00000265343 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.74■□□□□ 0.43
AFF4-201ENST00000265343 ERICH4A6NGS2 130 aa17.74■□□□□ 0.43
AFF4-201ENST00000265343 POTEB2H3BUK9 544 aa17.74■□□□□ 0.43
AFF4-201ENST00000265343 DYNC1I1O14576 645 aa17.74■□□□□ 0.43
AFF4-201ENST00000265343 KIF18AQ8NI77 898 aa17.74■□□□□ 0.43
AFF4-201ENST00000265343 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
AFF4-201ENST00000265343 CCDC102AQ96A19 550 aa17.74■□□□□ 0.43
AFF4-201ENST00000265343 STK26Q9P289 416 aa17.74■□□□□ 0.43
AFF4-201ENST00000265343 CFAP45Q9UL16 551 aa17.73■□□□□ 0.43
AFF4-201ENST00000265343 CCDC148Q8NFR7 591 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms